Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2022-input.r301-smll-165463876700066.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2022-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is StigmergyCommit-PT-03a, examination is ReachabilityDeadlock
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r301-smll-165463876700066
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 492K
-rw-r--r-- 1 mcc users 5.8K May 30 15:00 CTLCardinality.txt
-rw-r--r-- 1 mcc users 59K May 30 15:00 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.6K May 30 14:59 CTLFireability.txt
-rw-r--r-- 1 mcc users 65K May 30 14:59 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.4K May 25 13:00 LTLCardinality.txt
-rw-r--r-- 1 mcc users 23K May 25 13:00 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 25 13:00 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 25 13:00 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 29 12:20 NewModel
-rw-r--r-- 1 mcc users 9.1K May 30 15:01 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 95K May 30 15:01 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 6.6K May 30 15:01 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 54K May 30 15:01 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 25 13:00 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 25 13:00 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 29 12:20 equiv_col
-rw-r--r-- 1 mcc users 4 May 29 12:20 instance
-rw-r--r-- 1 mcc users 6 May 29 12:20 iscolored
-rw-r--r-- 1 mcc users 98K May 29 12:20 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME ReachabilityDeadlock

=== Now, execution of the tool begins

BK_START 1654642077734

Running Version 202205111006
[2022-06-07 22:48:00] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2022-06-07 22:48:00] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-06-07 22:48:00] [INFO ] Load time of PNML (sax parser for PT used): 222 ms
[2022-06-07 22:48:00] [INFO ] Transformed 148 places.
[2022-06-07 22:48:00] [INFO ] Transformed 332 transitions.
[2022-06-07 22:48:00] [INFO ] Found NUPN structural information;
[2022-06-07 22:48:00] [INFO ] Parsed PT model containing 148 places and 332 transitions in 466 ms.
Parsed 1 properties from file /home/mcc/execution/ReachabilityDeadlock.xml in 5 ms.
Working with output stream class java.io.PrintStream
Ensure Unique test removed 110 transitions
Reduce redundant transitions removed 110 transitions.
Built sparse matrix representations for Structural reductions in 7 ms.8682KB memory used
Starting structural reductions in DEADLOCKS mode, iteration 0 : 148/148 places, 222/222 transitions.
Computed a total of 28 stabilizing places and 27 stable transitions
Computed a total of 28 stabilizing places and 27 stable transitions
Drop transitions removed 17 transitions
Trivial Post-agglo rules discarded 17 transitions
Performed 17 trivial Post agglomeration. Transition count delta: 17
Iterating post reduction 0 with 17 rules applied. Total rules applied 17 place count 148 transition count 205
Reduce places removed 17 places and 0 transitions.
Ensure Unique test removed 8 transitions
Reduce isomorphic transitions removed 8 transitions.
Computed a total of 27 stabilizing places and 26 stable transitions
Iterating post reduction 1 with 25 rules applied. Total rules applied 42 place count 131 transition count 197
Computed a total of 27 stabilizing places and 26 stable transitions
Performed 32 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 2 with 32 Pre rules applied. Total rules applied 42 place count 131 transition count 165
Deduced a syphon composed of 32 places in 1 ms
Reduce places removed 32 places and 0 transitions.
Iterating global reduction 2 with 64 rules applied. Total rules applied 106 place count 99 transition count 165
Computed a total of 15 stabilizing places and 14 stable transitions
Discarding 20 places :
Symmetric choice reduction at 2 with 20 rule applications. Total rules 126 place count 79 transition count 141
Iterating global reduction 2 with 20 rules applied. Total rules applied 146 place count 79 transition count 141
Computed a total of 14 stabilizing places and 13 stable transitions
Discarding 17 places :
Symmetric choice reduction at 2 with 17 rule applications. Total rules 163 place count 62 transition count 120
Iterating global reduction 2 with 17 rules applied. Total rules applied 180 place count 62 transition count 120
Ensure Unique test removed 4 transitions
Reduce isomorphic transitions removed 4 transitions.
Computed a total of 13 stabilizing places and 12 stable transitions
Iterating post reduction 2 with 4 rules applied. Total rules applied 184 place count 62 transition count 116
Computed a total of 13 stabilizing places and 12 stable transitions
Discarding 9 places :
Symmetric choice reduction at 3 with 9 rule applications. Total rules 193 place count 53 transition count 107
Iterating global reduction 3 with 9 rules applied. Total rules applied 202 place count 53 transition count 107
Ensure Unique test removed 15 transitions
Reduce isomorphic transitions removed 15 transitions.
Computed a total of 12 stabilizing places and 11 stable transitions
Iterating post reduction 3 with 15 rules applied. Total rules applied 217 place count 53 transition count 92
Computed a total of 12 stabilizing places and 11 stable transitions
Discarding 5 places :
Symmetric choice reduction at 4 with 5 rule applications. Total rules 222 place count 48 transition count 87
Iterating global reduction 4 with 5 rules applied. Total rules applied 227 place count 48 transition count 87
Ensure Unique test removed 4 transitions
Reduce isomorphic transitions removed 4 transitions.
Computed a total of 11 stabilizing places and 10 stable transitions
Iterating post reduction 4 with 4 rules applied. Total rules applied 231 place count 48 transition count 83
Computed a total of 11 stabilizing places and 10 stable transitions
Performed 12 Post agglomeration using F-continuation condition.Transition count delta: 12
Deduced a syphon composed of 12 places in 0 ms
Reduce places removed 12 places and 0 transitions.
Iterating global reduction 5 with 24 rules applied. Total rules applied 255 place count 36 transition count 71
Ensure Unique test removed 4 transitions
Reduce isomorphic transitions removed 4 transitions.
Computed a total of 11 stabilizing places and 10 stable transitions
Iterating post reduction 5 with 4 rules applied. Total rules applied 259 place count 36 transition count 67
Computed a total of 11 stabilizing places and 10 stable transitions
Discarding 3 places :
Symmetric choice reduction at 6 with 3 rule applications. Total rules 262 place count 33 transition count 64
Iterating global reduction 6 with 3 rules applied. Total rules applied 265 place count 33 transition count 64
Computed a total of 8 stabilizing places and 7 stable transitions
Discarding 3 places :
Symmetric choice reduction at 6 with 3 rule applications. Total rules 268 place count 30 transition count 61
Iterating global reduction 6 with 3 rules applied. Total rules applied 271 place count 30 transition count 61
Computed a total of 5 stabilizing places and 4 stable transitions
Discarding 3 places :
Symmetric choice reduction at 6 with 3 rule applications. Total rules 274 place count 27 transition count 58
Iterating global reduction 6 with 3 rules applied. Total rules applied 277 place count 27 transition count 58
Computed a total of 2 stabilizing places and 1 stable transitions
Computed a total of 2 stabilizing places and 1 stable transitions
Drop transitions removed 4 transitions
Redundant transition composition rules discarded 4 transitions
Iterating global reduction 6 with 4 rules applied. Total rules applied 281 place count 27 transition count 54
Computed a total of 2 stabilizing places and 1 stable transitions
Computed a total of 2 stabilizing places and 1 stable transitions
Reduce places removed 1 places and 1 transitions.
Iterating global reduction 6 with 1 rules applied. Total rules applied 282 place count 26 transition count 53
Reduce places removed 1 places and 0 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Drop transitions removed 4 transitions
Trivial Post-agglo rules discarded 4 transitions
Performed 4 trivial Post agglomeration. Transition count delta: 4
Iterating post reduction 6 with 5 rules applied. Total rules applied 287 place count 25 transition count 49
Reduce places removed 4 places and 0 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Iterating post reduction 7 with 4 rules applied. Total rules applied 291 place count 21 transition count 49
Computed a total of 0 stabilizing places and 0 stable transitions
Performed 8 Post agglomeration using F-continuation condition.Transition count delta: 8
Deduced a syphon composed of 8 places in 0 ms
Reduce places removed 8 places and 0 transitions.
Iterating global reduction 8 with 16 rules applied. Total rules applied 307 place count 13 transition count 41
Ensure Unique test removed 4 transitions
Reduce isomorphic transitions removed 4 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Iterating post reduction 8 with 4 rules applied. Total rules applied 311 place count 13 transition count 37
Computed a total of 0 stabilizing places and 0 stable transitions
Performed 4 Post agglomeration using F-continuation condition.Transition count delta: 4
Deduced a syphon composed of 4 places in 0 ms
Reduce places removed 4 places and 0 transitions.
Iterating global reduction 9 with 8 rules applied. Total rules applied 319 place count 9 transition count 33
Ensure Unique test removed 4 transitions
Reduce isomorphic transitions removed 4 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Iterating post reduction 9 with 4 rules applied. Total rules applied 323 place count 9 transition count 29
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Drop transitions removed 15 transitions
Redundant transition composition rules discarded 15 transitions
Iterating global reduction 10 with 15 rules applied. Total rules applied 338 place count 9 transition count 14
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 338 rules in 128 ms. Remains 9 /148 variables (removed 139) and now considering 14/222 (removed 208) transitions.
Finished structural reductions, in 1 iterations. Remains : 9/148 places, 14/222 transitions.
Random walk for 1250000 steps, including 383905 resets, run took 1249 ms (no deadlock found). (steps per millisecond=1000 )
Random directed walk for 1250000 steps, including 202888 resets, run took 748 ms (no deadlock found). (steps per millisecond=1671 )
[2022-06-07 22:48:03] [INFO ] Flow matrix only has 10 transitions (discarded 4 similar events)
// Phase 1: matrix 10 rows 9 cols
[2022-06-07 22:48:03] [INFO ] Computed 1 place invariants in 14 ms
[2022-06-07 22:48:03] [INFO ] [Real]Absence check using 1 positive place invariants in 3 ms returned sat
[2022-06-07 22:48:03] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2022-06-07 22:48:03] [INFO ] [Real]Absence check using state equation in 15 ms returned unsat
FORMULA ReachabilityDeadlock FALSE TECHNIQUES TOPOLOGICAL SAT_SMT STRUCTURAL_REDUCTION
Total runtime 2934 ms.

BK_STOP 1654642083338

--------------------
content from stderr:

+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityDeadlock = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="StigmergyCommit-PT-03a"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is StigmergyCommit-PT-03a, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r301-smll-165463876700066"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/StigmergyCommit-PT-03a.tgz
mv StigmergyCommit-PT-03a execution
cd execution
if [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "UpperBounds" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] || [ "ReachabilityDeadlock" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityDeadlock"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;