About the Execution of ITS-Tools for StigmergyCommit-PT-10b
| Execution Summary | |||||
| Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
| 0.000 | 560165.00 | 0.00 | 0.00 | [undef] | Cannot compute |
Execution Chart
Sorry, for this execution, no execution chart could be reported.
Trace from the execution
Formatting '/data/fkordon/mcc2022-input.r294-smll-165463872600232.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2022-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is StigmergyCommit-PT-10b, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r294-smll-165463872600232
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 416M
-rw-r--r-- 1 mcc users 6.7K May 30 15:21 CTLCardinality.txt
-rw-r--r-- 1 mcc users 71K May 30 15:21 CTLCardinality.xml
-rw-r--r-- 1 mcc users 7.9K May 30 15:08 CTLFireability.txt
-rw-r--r-- 1 mcc users 75K May 30 15:08 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K May 25 13:02 LTLCardinality.txt
-rw-r--r-- 1 mcc users 23K May 25 13:02 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 25 13:02 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 25 13:02 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 29 12:20 NewModel
-rw-r--r-- 1 mcc users 8.0K May 30 15:30 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 78K May 30 15:30 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 6.8K May 30 15:26 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 52K May 30 15:26 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 25 13:02 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 25 13:02 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 29 12:20 equiv_col
-rw-r--r-- 1 mcc users 4 May 29 12:20 instance
-rw-r--r-- 1 mcc users 6 May 29 12:20 iscolored
-rw-r--r-- 1 mcc users 416M May 29 12:20 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
no data necessary for post analysis
=== Now, execution of the tool begins
BK_START 1654827265070
Running Version 202205111006
[2022-06-10 02:14:27] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2022-06-10 02:14:27] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-06-10 02:14:47] [INFO ] Load time of PNML (sax parser for PT used): 19425 ms
[2022-06-10 02:14:47] [INFO ] Transformed 3352 places.
[2022-06-10 02:14:49] [INFO ] Transformed 359880 transitions.
[2022-06-10 02:14:49] [INFO ] Found NUPN structural information;
[2022-06-10 02:14:49] [INFO ] Parsed PT model containing 3352 places and 359880 transitions in 21616 ms.
Starting structural reductions in STATESPACE mode, iteration 0 : 3352/3352 places, 359880/359880 transitions.
// Phase 1: matrix 359880 rows 3352 cols
[2022-06-10 02:15:24] [INFO ] Computed 12 place invariants in 28948 ms
[2022-06-10 02:15:25] [INFO ] Dead Transitions using invariants and state equation in 31031 ms found 0 transitions.
Finished structural reductions, in 1 iterations. Remains : 3352/3352 places, 359880/359880 transitions.
Final net has 3352 places and 359880 transitions.
[2022-06-10 02:16:36] [INFO ] Flatten gal took : 63470 ms
[2022-06-10 02:17:38] [INFO ] Applying decomposition
[2022-06-10 02:18:39] [INFO ] Flatten gal took : 61819 ms
[2022-06-10 02:21:25] [WARNING] Could not apply decomposition. Using flat GAL structure.
java.util.concurrent.TimeoutException: Subprocess running '/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202205111006/bin/convert-linux64' '-i' '/tmp/graph4453327406957493358.txt' '-o' '/tmp/graph4453327406957493358.bin' '-w' '/tmp/graph4453327406957493358.weights' killed by timeout after 10 SECONDS
at fr.lip6.move.gal.process.Runner.waitForOrTimeout(Runner.java:76)
at fr.lip6.move.gal.process.Runner.runTool(Runner.java:47)
at fr.lip6.move.gal.process.Runner.runTool(Runner.java:27)
at fr.lip6.move.gal.louvain.GraphBuilder.convertGraphToBin(GraphBuilder.java:258)
at fr.lip6.move.gal.louvain.GraphBuilder.computeLouvain(GraphBuilder.java:189)
at fr.lip6.move.gal.louvain.GraphBuilder.computeLouvain(GraphBuilder.java:157)
at fr.lip6.move.gal.application.mcc.MccTranslator.applyOrder(MccTranslator.java:213)
at fr.lip6.move.gal.application.mcc.MccTranslator.flattenSpec(MccTranslator.java:264)
at fr.lip6.move.gal.application.runner.its.MultiOrderRunner.runMultiITS(MultiOrderRunner.java:98)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:420)
at fr.lip6.move.gal.application.Application.start(Application.java:174)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:43)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:401)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2022-06-10 02:22:32] [INFO ] Flatten gal took : 66503 ms
java.io.IOException: Stream Closed
at java.base/java.io.FileOutputStream.writeBytes(Native Method)
at java.base/java.io.FileOutputStream.write(FileOutputStream.java:354)
at java.base/java.io.BufferedOutputStream.flushBuffer(BufferedOutputStream.java:81)
at java.base/java.io.BufferedOutputStream.flush(BufferedOutputStream.java:142)
at fr.lip6.move.serialization.SerializationUtil.systemToFile(SerializationUtil.java:98)
at fr.lip6.move.gal.application.runner.its.ITSRunner.outputGalFile(ITSRunner.java:409)
at fr.lip6.move.gal.application.runner.its.ITSRunner.configure(ITSRunner.java:67)
at fr.lip6.move.gal.application.runner.its.MultiOrderRunner.startRunner(MultiOrderRunner.java:153)
at fr.lip6.move.gal.application.runner.its.MultiOrderRunner.runMultiITS(MultiOrderRunner.java:104)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:420)
at fr.lip6.move.gal.application.Application.start(Application.java:174)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:43)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:401)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2022-06-10 02:22:40] [INFO ] Time to serialize gal into /tmp/StateSpace7523711432706165085.gal : 7769 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace7523711432706165085.gal' '-t' 'CGAL' '--stats' '--gen-order' 'FOLLOW'
its-reach command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...231
BK_STOP 1654827825235
--------------------
content from stderr:
+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination StateSpace -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="StigmergyCommit-PT-10b"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is StigmergyCommit-PT-10b, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r294-smll-165463872600232"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/StigmergyCommit-PT-10b.tgz
mv StigmergyCommit-PT-10b execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;