Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2022-input.r168-tall-165277017100760.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2022-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
...................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is PolyORBNT-COL-S05J60, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r168-tall-165277017100760
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 352K
-rw-r--r-- 1 mcc users 8.8K Apr 30 03:06 CTLCardinality.txt
-rw-r--r-- 1 mcc users 89K Apr 30 03:06 CTLCardinality.xml
-rw-r--r-- 1 mcc users 7.2K Apr 30 03:04 CTLFireability.txt
-rw-r--r-- 1 mcc users 65K Apr 30 03:04 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 10 09:34 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.0K May 9 08:29 LTLCardinality.txt
-rw-r--r-- 1 mcc users 23K May 9 08:29 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.5K May 9 08:29 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K May 9 08:29 LTLFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 9 08:29 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 9 08:29 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 10 09:34 equiv_pt
-rw-r--r-- 1 mcc users 7 May 10 09:34 instance
-rw-r--r-- 1 mcc users 5 May 10 09:34 iscolored
-rw-r--r-- 1 mcc users 94K May 10 09:34 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1652937236327

Running Version 202205111006
[2022-05-19 05:13:57] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2022-05-19 05:13:57] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-05-19 05:13:57] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[2022-05-19 05:13:57] [WARNING] Using fallBack plugin, rng conformance not checked
[2022-05-19 05:13:58] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 603 ms
[2022-05-19 05:13:58] [INFO ] Imported 48 HL places and 38 HL transitions for a total of 969 PT places and 2152.0 transition bindings in 21 ms.
[2022-05-19 05:13:58] [INFO ] Unfolded HLPN to a Petri net with 969 places and 2030 transitions 12704 arcs in 54 ms.
[2022-05-19 05:13:58] [INFO ] Unfolded 0 HLPN properties in 0 ms.
Deduced a syphon composed of 60 places in 10 ms
Reduce places removed 60 places and 60 transitions.
Ensure Unique test removed 655 transitions
Reduce redundant transitions removed 655 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 909/909 places, 1315/1315 transitions.
[2022-05-19 05:13:58] [INFO ] Flow matrix only has 1311 transitions (discarded 4 similar events)
// Phase 1: matrix 1311 rows 909 cols
[2022-05-19 05:13:58] [INFO ] Computed 142 place invariants in 111 ms
[2022-05-19 05:13:59] [INFO ] Dead Transitions using invariants and state equation in 1436 ms found 95 transitions.
Found 95 dead transitions using SMT.
Drop transitions removed 95 transitions
Dead transitions reduction (with SMT) triggered by suspicious arc values removed 95 transitions.
[2022-05-19 05:13:59] [INFO ] Redundant transitions in 74 ms returned []
Starting structural reductions in STATESPACE mode, iteration 1 : 909/909 places, 1220/1315 transitions.
Finished structural reductions, in 1 iterations. Remains : 909/909 places, 1220/1315 transitions.
Final net has 909 places and 1220 transitions.
[2022-05-19 05:14:00] [INFO ] Flatten gal took : 164 ms
[2022-05-19 05:14:00] [INFO ] Applying decomposition
[2022-05-19 05:14:00] [INFO ] Flatten gal took : 114 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202205111006/bin/convert-linux64' '-i' '/tmp/graph4345686312149311327.txt' '-o' '/tmp/graph4345686312149311327.bin' '-w' '/tmp/graph4345686312149311327.weights'
Built communities with : '/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202205111006/bin/louvain-linux64' '/tmp/graph4345686312149311327.bin' '-l' '-1' '-v' '-w' '/tmp/graph4345686312149311327.weights' '-q' '0' '-e' '0.001'
[2022-05-19 05:14:00] [INFO ] Decomposing Gal with order
[2022-05-19 05:14:00] [INFO ] Rewriting arrays to variables to allow decomposition.
[2022-05-19 05:14:01] [INFO ] Removed a total of 1619 redundant transitions.
[2022-05-19 05:14:01] [INFO ] Flatten gal took : 509 ms
[2022-05-19 05:14:01] [INFO ] Fuse similar labels procedure discarded/fused a total of 411 labels/synchronizations in 62 ms.
[2022-05-19 05:14:01] [INFO ] Time to serialize gal into /tmp/StateSpace13933309710987464639.gal : 20 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace13933309710987464639.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...211
Detected timeout of ITS tools.
[2022-05-19 05:34:12] [INFO ] Applying decomposition
[2022-05-19 05:34:13] [INFO ] Flatten gal took : 835 ms
[2022-05-19 05:34:13] [INFO ] Decomposing Gal with order
[2022-05-19 05:34:13] [INFO ] Rewriting arrays to variables to allow decomposition.
[2022-05-19 05:34:14] [INFO ] Removed a total of 3941 redundant transitions.
[2022-05-19 05:34:14] [INFO ] Flatten gal took : 330 ms
[2022-05-19 05:34:14] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 17 ms.
[2022-05-19 05:34:14] [INFO ] Time to serialize gal into /tmp/StateSpace5331791995179320413.gal : 17 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace5331791995179320413.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...210
Detected timeout of ITS tools.
[2022-05-19 05:54:26] [INFO ] Flatten gal took : 483 ms
[2022-05-19 05:54:27] [INFO ] Input system was already deterministic with 1220 transitions.
[2022-05-19 05:54:27] [INFO ] Transformed 909 places.
[2022-05-19 05:54:27] [INFO ] Transformed 1220 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2022-05-19 05:54:57] [INFO ] Time to serialize gal into /tmp/StateSpace6690340928770001876.gal : 34 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace6690340928770001876.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...276
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination StateSpace -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBNT-COL-S05J60"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is PolyORBNT-COL-S05J60, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r168-tall-165277017100760"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBNT-COL-S05J60.tgz
mv PolyORBNT-COL-S05J60 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;