Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2022-input.r168-tall-165277016700432.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2022-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..............................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is PhilosophersDyn-PT-20, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r168-tall-165277016700432
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 27M
-rw-r--r-- 1 mcc users 136K Apr 30 08:43 CTLCardinality.txt
-rw-r--r-- 1 mcc users 529K Apr 30 08:43 CTLCardinality.xml
-rw-r--r-- 1 mcc users 1.3M Apr 30 08:34 CTLFireability.txt
-rw-r--r-- 1 mcc users 5.7M Apr 30 08:34 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 10 09:34 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 31K May 9 08:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 101K May 9 08:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.2M May 9 08:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 4.2M May 9 08:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.6K May 9 08:27 UpperBounds.txt
-rw-r--r-- 1 mcc users 8.8K May 9 08:27 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 10 09:34 equiv_col
-rw-r--r-- 1 mcc users 3 May 10 09:34 instance
-rw-r--r-- 1 mcc users 6 May 10 09:34 iscolored
-rw-r--r-- 1 mcc users 14M May 10 09:34 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1652846828098

Running Version 202205111006
[2022-05-18 04:07:09] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2022-05-18 04:07:09] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-05-18 04:07:10] [INFO ] Load time of PNML (sax parser for PT used): 693 ms
[2022-05-18 04:07:10] [INFO ] Transformed 540 places.
[2022-05-18 04:07:10] [INFO ] Transformed 17220 transitions.
[2022-05-18 04:07:10] [INFO ] Parsed PT model containing 540 places and 17220 transitions in 956 ms.
Ensure Unique test removed 190 transitions
Reduce redundant transitions removed 190 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 540/540 places, 17030/17030 transitions.
[2022-05-18 04:07:14] [INFO ] Flow matrix only has 15510 transitions (discarded 1520 similar events)
// Phase 1: matrix 15510 rows 540 cols
[2022-05-18 04:07:15] [INFO ] Computed 79 place invariants in 1152 ms
[2022-05-18 04:07:24] [INFO ] Dead Transitions using invariants and state equation in 9387 ms found 1560 transitions.
Found 1560 dead transitions using SMT.
Drop transitions removed 1560 transitions
Dead transitions reduction (with SMT) triggered by suspicious arc values removed 1560 transitions.
Starting structural reductions in STATESPACE mode, iteration 1 : 540/540 places, 15470/17030 transitions.
Finished structural reductions, in 1 iterations. Remains : 540/540 places, 15470/17030 transitions.
Final net has 540 places and 15470 transitions.
[2022-05-18 04:07:29] [INFO ] Flatten gal took : 1118 ms
[2022-05-18 04:07:29] [INFO ] Applying decomposition
[2022-05-18 04:07:30] [INFO ] Flatten gal took : 888 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202205111006/bin/convert-linux64' '-i' '/tmp/graph15285379696967937392.txt' '-o' '/tmp/graph15285379696967937392.bin' '-w' '/tmp/graph15285379696967937392.weights'
Built communities with : '/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202205111006/bin/louvain-linux64' '/tmp/graph15285379696967937392.bin' '-l' '-1' '-v' '-w' '/tmp/graph15285379696967937392.weights' '-q' '0' '-e' '0.001'
[2022-05-18 04:07:32] [INFO ] Decomposing Gal with order
[2022-05-18 04:07:32] [INFO ] Rewriting arrays to variables to allow decomposition.
[2022-05-18 04:07:40] [INFO ] Removed a total of 25640 redundant transitions.
[2022-05-18 04:07:42] [INFO ] Flatten gal took : 9148 ms
[2022-05-18 04:07:43] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 155 ms.
[2022-05-18 04:07:43] [INFO ] Time to serialize gal into /tmp/StateSpace3600825222014213413.gal : 148 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace3600825222014213413.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...210
Detected timeout of ITS tools.
[2022-05-18 04:28:01] [INFO ] Flatten gal took : 6321 ms
[2022-05-18 04:28:02] [INFO ] Time to serialize gal into /tmp/StateSpace6068514312256924804.gal : 528 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace6068514312256924804.gal' '-t' 'CGAL' '--stats' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...231
Detected timeout of ITS tools.
[2022-05-18 04:48:32] [INFO ] Flatten gal took : 9245 ms
[2022-05-18 04:48:45] [INFO ] Input system was already deterministic with 15470 transitions.
[2022-05-18 04:48:45] [INFO ] Transformed 540 places.
[2022-05-18 04:48:45] [INFO ] Transformed 15470 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2022-05-18 04:49:16] [INFO ] Time to serialize gal into /tmp/StateSpace14509712236401606519.gal : 77 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace14509712236401606519.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...277
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination StateSpace -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PhilosophersDyn-PT-20"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is PhilosophersDyn-PT-20, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r168-tall-165277016700432"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PhilosophersDyn-PT-20.tgz
mv PhilosophersDyn-PT-20 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;