Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2022-input.r168-tall-165277016300136.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2022-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
...........................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is PhaseVariation-PT-D10CS010, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r168-tall-165277016300136
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 3.2M
-rw-r--r-- 1 mcc users 11K Apr 29 12:05 CTLCardinality.txt
-rw-r--r-- 1 mcc users 97K Apr 29 12:05 CTLCardinality.xml
-rw-r--r-- 1 mcc users 8.5K Apr 29 12:03 CTLFireability.txt
-rw-r--r-- 1 mcc users 54K Apr 29 12:03 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 10 09:34 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.5K May 9 08:25 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K May 9 08:25 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.8K May 9 08:25 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 9 08:25 LTLFireability.xml
-rw-r--r-- 1 mcc users 1.9K May 9 08:25 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 9 08:25 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 10 09:34 equiv_col
-rw-r--r-- 1 mcc users 9 May 10 09:34 instance
-rw-r--r-- 1 mcc users 6 May 10 09:34 iscolored
-rw-r--r-- 1 mcc users 2.9M May 10 09:34 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1652792155857

Running Version 202205111006
[2022-05-17 12:55:56] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2022-05-17 12:55:56] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-05-17 12:55:57] [INFO ] Load time of PNML (sax parser for PT used): 302 ms
[2022-05-17 12:55:57] [INFO ] Transformed 302 places.
[2022-05-17 12:55:57] [INFO ] Transformed 3137 transitions.
[2022-05-17 12:55:57] [INFO ] Parsed PT model containing 302 places and 3137 transitions in 429 ms.
Deduced a syphon composed of 2 places in 5 ms
Reduce places removed 2 places and 52 transitions.
Reduce places removed 1 places and 0 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 299/299 places, 3085/3085 transitions.
Drop transitions removed 256 transitions
Redundant transition composition rules discarded 256 transitions
[2022-05-17 12:55:58] [INFO ] Flow matrix only has 199 transitions (discarded 2630 similar events)
// Phase 1: matrix 199 rows 299 cols
[2022-05-17 12:55:58] [INFO ] Computed 100 place invariants in 19 ms
[2022-05-17 12:55:59] [INFO ] Dead Transitions using invariants and state equation in 1044 ms found 364 transitions.
Found 364 dead transitions using SMT.
Drop transitions removed 364 transitions
Dead transitions reduction (with SMT) triggered by suspicious arc values removed 364 transitions.
[2022-05-17 12:55:59] [INFO ] Redundant transitions in 138 ms returned []
Starting structural reductions in STATESPACE mode, iteration 1 : 299/299 places, 2465/3085 transitions.
Finished structural reductions, in 1 iterations. Remains : 299/299 places, 2465/3085 transitions.
Final net has 299 places and 2465 transitions.
[2022-05-17 12:56:00] [INFO ] Flatten gal took : 258 ms
[2022-05-17 12:56:00] [INFO ] Applying decomposition
[2022-05-17 12:56:00] [INFO ] Flatten gal took : 153 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202205111006/bin/convert-linux64' '-i' '/tmp/graph18399895330095469904.txt' '-o' '/tmp/graph18399895330095469904.bin' '-w' '/tmp/graph18399895330095469904.weights'
Built communities with : '/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202205111006/bin/louvain-linux64' '/tmp/graph18399895330095469904.bin' '-l' '-1' '-v' '-w' '/tmp/graph18399895330095469904.weights' '-q' '0' '-e' '0.001'
[2022-05-17 12:56:00] [INFO ] Decomposing Gal with order
[2022-05-17 12:56:01] [INFO ] Rewriting arrays to variables to allow decomposition.
[2022-05-17 12:56:01] [INFO ] Removed a total of 6801 redundant transitions.
[2022-05-17 12:56:01] [INFO ] Flatten gal took : 255 ms
[2022-05-17 12:56:01] [INFO ] Fuse similar labels procedure discarded/fused a total of 942 labels/synchronizations in 84 ms.
[2022-05-17 12:56:01] [INFO ] Time to serialize gal into /tmp/StateSpace17742821364295573613.gal : 18 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace17742821364295573613.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...211
Detected timeout of ITS tools.
[2022-05-17 13:16:05] [INFO ] Flatten gal took : 900 ms
[2022-05-17 13:16:05] [INFO ] Time to serialize gal into /tmp/StateSpace1903650014288294496.gal : 83 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace1903650014288294496.gal' '-t' 'CGAL' '--stats' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...231
Detected timeout of ITS tools.
[2022-05-17 13:36:07] [INFO ] Flatten gal took : 303 ms
[2022-05-17 13:36:07] [INFO ] Input system was already deterministic with 2465 transitions.
[2022-05-17 13:36:07] [INFO ] Transformed 299 places.
[2022-05-17 13:36:07] [INFO ] Transformed 2465 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2022-05-17 13:36:07] [INFO ] Time to serialize gal into /tmp/StateSpace10537415547490304291.gal : 9 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace10537415547490304291.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...277
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination StateSpace -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PhaseVariation-PT-D10CS010"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is PhaseVariation-PT-D10CS010, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r168-tall-165277016300136"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PhaseVariation-PT-D10CS010.tgz
mv PhaseVariation-PT-D10CS010 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;