Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2022-input.r168-tall-165277016200096.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2022-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..........................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is Peterson-PT-7, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r168-tall-165277016200096
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 5.1M
-rw-r--r-- 1 mcc users 283K Apr 30 10:02 CTLCardinality.txt
-rw-r--r-- 1 mcc users 1.2M Apr 30 10:02 CTLCardinality.xml
-rw-r--r-- 1 mcc users 190K Apr 30 09:52 CTLFireability.txt
-rw-r--r-- 1 mcc users 861K Apr 30 09:52 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 10 09:34 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 168K May 9 08:24 LTLCardinality.txt
-rw-r--r-- 1 mcc users 481K May 9 08:24 LTLCardinality.xml
-rw-r--r-- 1 mcc users 122K May 9 08:24 LTLFireability.txt
-rw-r--r-- 1 mcc users 417K May 9 08:24 LTLFireability.xml
-rw-r--r-- 1 mcc users 27K May 9 08:24 UpperBounds.txt
-rw-r--r-- 1 mcc users 59K May 9 08:24 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 10 09:34 equiv_col
-rw-r--r-- 1 mcc users 2 May 10 09:34 instance
-rw-r--r-- 1 mcc users 6 May 10 09:34 iscolored
-rw-r--r-- 1 mcc users 1.3M May 10 09:34 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1652789761949

Running Version 202205111006
[2022-05-17 12:16:03] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2022-05-17 12:16:03] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-05-17 12:16:03] [INFO ] Load time of PNML (sax parser for PT used): 180 ms
[2022-05-17 12:16:03] [INFO ] Transformed 1992 places.
[2022-05-17 12:16:03] [INFO ] Transformed 3096 transitions.
[2022-05-17 12:16:03] [INFO ] Found NUPN structural information;
[2022-05-17 12:16:03] [INFO ] Completing missing partition info from NUPN : creating a component with [IsEndLoop_3_0_5, IsEndLoop_2_0_5, IsEndLoop_0_3_6, IsEndLoop_0_2_7, EndTurn_4_2, EndTurn_4_1, EndTurn_7_0, EndTurn_6_0, EndTurn_5_0, IsEndLoop_7_6_7, IsEndLoop_6_6_7, IsEndLoop_5_6_7, BeginLoop_1_4_2, BeginLoop_0_4_2, BeginLoop_3_0_4, BeginLoop_3_6_3, BeginLoop_0_6_5, BeginLoop_3_6_5, BeginLoop_4_2_7, BeginLoop_7_1_7, BeginLoop_5_1_7, BeginLoop_6_1_7, BeginLoop_4_1_7, BeginLoop_7_0_7, BeginLoop_6_0_7, BeginLoop_5_0_7, TestAlone_2_4_0, TestAlone_2_5_0, TestAlone_3_6_1, TestAlone_3_0_2, TestAlone_1_5_5, TestAlone_0_5_5, TestAlone_3_5_6, TestAlone_2_5_6, TestIdentity_4_2_1, TestIdentity_4_3_1, TestIdentity_7_2_1, TestIdentity_5_2_1, TestIdentity_6_2_1, TestIdentity_7_6_0, TestIdentity_6_6_0, TestIdentity_5_6_0, TestIdentity_0_2_3, TestIdentity_1_2_3, TestIdentity_1_1_6, TestIdentity_0_2_6, TestIdentity_2_4_4, TestIdentity_1_4_4, TestIdentity_4_5_7, TestIdentity_6_4_7, TestIdentity_5_4_7, TestIdentity_7_4_7, TestIdentity_4_4_7, TestIdentity_6_3_7, TestIdentity_5_3_7, TestIdentity_7_3_7, CS_0, CS_2, AskForSection_2_5, AskForSection_0_5]
[2022-05-17 12:16:03] [INFO ] Parsed PT model containing 1992 places and 3096 transitions in 314 ms.
Starting structural reductions in STATESPACE mode, iteration 0 : 1992/1992 places, 3096/3096 transitions.
[2022-05-17 12:16:03] [INFO ] Redundant transitions in 166 ms returned []
[2022-05-17 12:16:03] [INFO ] Flow matrix only has 2760 transitions (discarded 336 similar events)
// Phase 1: matrix 2760 rows 1992 cols
[2022-05-17 12:16:03] [INFO ] Computed 31 place invariants in 35 ms
[2022-05-17 12:16:05] [INFO ] Dead Transitions using invariants and state equation in 2064 ms found 0 transitions.
Finished structural reductions, in 1 iterations. Remains : 1992/1992 places, 3096/3096 transitions.
Final net has 1992 places and 3096 transitions.
[2022-05-17 12:16:06] [INFO ] Flatten gal took : 225 ms
[2022-05-17 12:16:06] [INFO ] Applying decomposition
[2022-05-17 12:16:06] [INFO ] Flatten gal took : 212 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202205111006/bin/convert-linux64' '-i' '/tmp/graph4988590386213903157.txt' '-o' '/tmp/graph4988590386213903157.bin' '-w' '/tmp/graph4988590386213903157.weights'
Built communities with : '/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202205111006/bin/louvain-linux64' '/tmp/graph4988590386213903157.bin' '-l' '-1' '-v' '-w' '/tmp/graph4988590386213903157.weights' '-q' '0' '-e' '0.001'
[2022-05-17 12:16:07] [INFO ] Decomposing Gal with order
[2022-05-17 12:16:07] [INFO ] Rewriting arrays to variables to allow decomposition.
[2022-05-17 12:16:07] [INFO ] Removed a total of 2834 redundant transitions.
[2022-05-17 12:16:08] [INFO ] Flatten gal took : 375 ms
[2022-05-17 12:16:08] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 45 ms.
[2022-05-17 12:16:08] [INFO ] Time to serialize gal into /tmp/StateSpace10638944790536818820.gal : 62 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace10638944790536818820.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...211
Detected timeout of ITS tools.
[2022-05-17 12:36:15] [INFO ] Applying decomposition
[2022-05-17 12:36:16] [INFO ] Flatten gal took : 220 ms
[2022-05-17 12:36:16] [INFO ] Decomposing Gal with order
[2022-05-17 12:36:16] [INFO ] Rewriting arrays to variables to allow decomposition.
[2022-05-17 12:36:17] [INFO ] Removed a total of 2137 redundant transitions.
[2022-05-17 12:36:17] [INFO ] Flatten gal took : 1200 ms
[2022-05-17 12:36:17] [INFO ] Fuse similar labels procedure discarded/fused a total of 977 labels/synchronizations in 120 ms.
[2022-05-17 12:36:17] [INFO ] Time to serialize gal into /tmp/StateSpace18370701219727194157.gal : 20 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace18370701219727194157.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...211
Detected timeout of ITS tools.
[2022-05-17 12:56:35] [INFO ] Flatten gal took : 739 ms
[2022-05-17 12:56:36] [INFO ] Input system was already deterministic with 3096 transitions.
[2022-05-17 12:56:37] [INFO ] Transformed 1992 places.
[2022-05-17 12:56:37] [INFO ] Transformed 3096 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2022-05-17 12:56:37] [INFO ] Time to serialize gal into /tmp/StateSpace8341131440523366272.gal : 11 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace8341131440523366272.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp...276
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination StateSpace -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Peterson-PT-7"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is Peterson-PT-7, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r168-tall-165277016200096"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Peterson-PT-7.tgz
mv Peterson-PT-7 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;