Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2022-input.r144-tall-165271831100328.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2022-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool gold2021
Input is LeafsetExtension-PT-S64C2, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r144-tall-165271831100328
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 14M
-rw-r--r-- 1 mcc users 10K Apr 29 12:39 CTLCardinality.txt
-rw-r--r-- 1 mcc users 67K Apr 29 12:39 CTLCardinality.xml
-rw-r--r-- 1 mcc users 9.3K Apr 29 12:38 CTLFireability.txt
-rw-r--r-- 1 mcc users 53K Apr 29 12:38 CTLFireability.xml
-rw-r--r-- 1 mcc users 5.8K May 9 08:12 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K May 9 08:12 LTLCardinality.xml
-rw-r--r-- 1 mcc users 4.2K May 9 08:12 LTLFireability.txt
-rw-r--r-- 1 mcc users 20K May 9 08:12 LTLFireability.xml
-rw-r--r-- 1 mcc users 2.2K May 9 08:12 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.3K May 9 08:12 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 10 09:34 equiv_col
-rw-r--r-- 1 mcc users 6 May 10 09:34 instance
-rw-r--r-- 1 mcc users 6 May 10 09:34 iscolored
-rw-r--r-- 1 mcc users 14M May 10 09:34 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1652745312933

Running Version 0
[2022-05-16 23:55:14] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2022-05-16 23:55:14] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-05-16 23:55:15] [INFO ] Load time of PNML (sax parser for PT used): 579 ms
[2022-05-16 23:55:15] [INFO ] Transformed 21462 places.
[2022-05-16 23:55:15] [INFO ] Transformed 21129 transitions.
[2022-05-16 23:55:15] [INFO ] Parsed PT model containing 21462 places and 21129 transitions in 790 ms.
Incomplete random walk after 10000 steps, including 549 resets, run finished after 6338 ms. (steps per millisecond=1 ) properties (out of 21462) seen :5366
Running SMT prover for 16096 properties.
// Phase 1: matrix 21129 rows 21462 cols
[2022-05-16 23:55:26] [INFO ] Computed 333 place invariants in 4699 ms
[2022-05-16 23:55:52] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
Fused 16096 Parikh solutions to 1 different solutions.
Support contains 16096 out of 21462 places. Attempting structural reductions.
Starting structural reductions, iteration 0 : 21462/21462 places, 21129/21129 transitions.
Graph (complete) has 42457 edges and 21462 vertex of which 18626 are kept as prefixes of interest. Removing 2836 places using SCC suffix rule.50 ms
Discarding 2836 places :
Also discarding 923 output transitions
Drop transitions removed 923 transitions
Drop transitions removed 923 transitions
Reduce isomorphic transitions removed 923 transitions.
Drop transitions removed 955 transitions
Trivial Post-agglo rules discarded 955 transitions
Performed 955 trivial Post agglomeration. Transition count delta: 955
Iterating post reduction 0 with 1878 rules applied. Total rules applied 1879 place count 18626 transition count 18328
Reduce places removed 957 places and 0 transitions.
Drop transitions removed 129 transitions
Trivial Post-agglo rules discarded 129 transitions
Performed 129 trivial Post agglomeration. Transition count delta: 129
Iterating post reduction 1 with 1086 rules applied. Total rules applied 2965 place count 17669 transition count 18199
Reduce places removed 129 places and 0 transitions.
Iterating post reduction 2 with 129 rules applied. Total rules applied 3094 place count 17540 transition count 18199
Performed 129 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 3 with 129 Pre rules applied. Total rules applied 3094 place count 17540 transition count 18070
Deduced a syphon composed of 129 places in 12 ms
Reduce places removed 129 places and 0 transitions.
Iterating global reduction 3 with 258 rules applied. Total rules applied 3352 place count 17411 transition count 18070
Applied a total of 3352 rules in 1470 ms. Remains 17411 /21462 variables (removed 4051) and now considering 18070/21129 (removed 3059) transitions.
Finished structural reductions, in 1 iterations. Remains : 17411/21462 places, 18070/21129 transitions.
[2022-05-16 23:55:54] [INFO ] Flatten gal took : 810 ms
[2022-05-16 23:55:55] [INFO ] Flatten gal took : 617 ms
[2022-05-16 23:55:55] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality1979543129285415893.gal : 115 ms
[2022-05-16 23:55:55] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality149366660661765422.prop : 33 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality1979543129285415893.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality149366660661765422.prop, --nowitness, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality1979543129285415893.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality149366660661765422.prop --nowitness --gen-order FOLLOW
Loading property file /tmp/ReachabilityCardinality149366660661765422.prop.
Detected timeout of ITS tools.
[2022-05-16 23:56:11] [INFO ] Flatten gal took : 523 ms
[2022-05-16 23:56:11] [INFO ] Applying decomposition
[2022-05-16 23:56:11] [INFO ] Flatten gal took : 520 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph2114766130792863501.txt, -o, /tmp/graph2114766130792863501.bin, -w, /tmp/graph2114766130792863501.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph2114766130792863501.bin, -l, -1, -v, -w, /tmp/graph2114766130792863501.weights, -q, 0, -e, 0.001], workingDir=null]
[2022-05-16 23:56:13] [INFO ] Decomposing Gal with order
[2022-05-16 23:56:16] [INFO ] Rewriting arrays to variables to allow decomposition.
[2022-05-16 23:56:40] [INFO ] Removed a total of 17969 redundant transitions.
[2022-05-16 23:56:40] [INFO ] Flatten gal took : 1364 ms
[2022-05-16 23:56:43] [INFO ] Fuse similar labels procedure discarded/fused a total of 6 labels/synchronizations in 216 ms.
[2022-05-16 23:56:44] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality18327315944706069581.gal : 166 ms
[2022-05-16 23:56:44] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality8688112424689254340.prop : 25 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality18327315944706069581.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality8688112424689254340.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality18327315944706069581.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality8688112424689254340.prop --nowitness
Loading property file /tmp/ReachabilityCardinality8688112424689254340.prop.
Detected timeout of ITS tools.
Built C files in :
/tmp/ltsmin12404708905916027281
[2022-05-16 23:56:59] [INFO ] Built C files in 388ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin12404708905916027281
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin12404708905916027281]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin12404708905916027281] killed by timeout after 1 SECONDS
java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin12404708905916027281] killed by timeout after 1 SECONDS
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:79)
at java.base/java.lang.Thread.run(Thread.java:834)
Finished random walk after 214516 steps, including 18346 resets, run visited all 16096 properties in 22961 ms. (steps per millisecond=9 )
Able to resolve query StableMarking after proving 21462 properties.
FORMULA StableMarking FALSE TECHNIQUES RANDOM_WALK TOPOLOGICAL

BK_STOP 1652745444673

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StableMarking = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StableMarking -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="LeafsetExtension-PT-S64C2"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="gold2021"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool gold2021"
echo " Input is LeafsetExtension-PT-S64C2, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r144-tall-165271831100328"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/LeafsetExtension-PT-S64C2.tgz
mv LeafsetExtension-PT-S64C2 execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StableMarking.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;