Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2022-input.r132-tall-165271821100633.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2022-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is MAPKbis-PT-5310, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r132-tall-165271821100633
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 428K
-rw-r--r-- 1 mcc users 8.8K Apr 30 00:42 CTLCardinality.txt
-rw-r--r-- 1 mcc users 84K Apr 30 00:42 CTLCardinality.xml
-rw-r--r-- 1 mcc users 9.7K Apr 30 00:19 CTLFireability.txt
-rw-r--r-- 1 mcc users 41K Apr 30 00:19 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 10 09:34 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.4K May 10 09:34 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.4K May 9 08:14 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K May 9 08:14 LTLCardinality.xml
-rw-r--r-- 1 mcc users 5.9K May 9 08:14 LTLFireability.txt
-rw-r--r-- 1 mcc users 22K May 9 08:14 LTLFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 9 08:14 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 9 08:14 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 10 09:34 equiv_col
-rw-r--r-- 1 mcc users 5 May 10 09:34 instance
-rw-r--r-- 1 mcc users 6 May 10 09:34 iscolored
-rw-r--r-- 1 mcc users 170K May 10 09:34 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-00
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-01
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-02
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-03
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-04
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-05
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-06
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-07
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-08
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-09
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-10
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-11
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-12
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-13
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-14
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-15

=== Now, execution of the tool begins

BK_START 1652821238761

Running Version 202205111006
[2022-05-17 21:00:39] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLCardinality, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2022-05-17 21:00:39] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-05-17 21:00:40] [INFO ] Load time of PNML (sax parser for PT used): 84 ms
[2022-05-17 21:00:40] [INFO ] Transformed 106 places.
[2022-05-17 21:00:40] [INFO ] Transformed 173 transitions.
[2022-05-17 21:00:40] [INFO ] Found NUPN structural information;
[2022-05-17 21:00:40] [INFO ] Parsed PT model containing 106 places and 173 transitions in 182 ms.
Parsed 16 properties from file /home/mcc/execution/CTLCardinality.xml in 12 ms.
Deduced a syphon composed of 11 places in 2 ms
Reduce places removed 15 places and 41 transitions.
Reduce places removed 7 places and 0 transitions.
FORMULA MAPKbis-PT-5310-CTLCardinality-08 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5310-CTLCardinality-12 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5310-CTLCardinality-14 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Support contains 55 out of 84 places. Attempting structural reductions.
Starting structural reductions in LTL mode, iteration 0 : 84/84 places, 132/132 transitions.
Ensure Unique test removed 2 transitions
Reduce isomorphic transitions removed 2 transitions.
Iterating post reduction 0 with 2 rules applied. Total rules applied 2 place count 84 transition count 130
Applied a total of 2 rules in 11 ms. Remains 84 /84 variables (removed 0) and now considering 130/132 (removed 2) transitions.
[2022-05-17 21:00:40] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:40] [INFO ] Computed 42 place invariants in 12 ms
[2022-05-17 21:00:40] [INFO ] Implicit Places using invariants in 177 ms returned []
[2022-05-17 21:00:40] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:40] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:40] [INFO ] State equation strengthened by 42 read => feed constraints.
[2022-05-17 21:00:40] [INFO ] Implicit Places using invariants and state equation in 116 ms returned []
Implicit Place search using SMT with State Equation took 319 ms to find 0 implicit places.
[2022-05-17 21:00:40] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:40] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:40] [INFO ] Dead Transitions using invariants and state equation in 85 ms found 0 transitions.
Starting structural reductions in LTL mode, iteration 1 : 84/84 places, 130/132 transitions.
Finished structural reductions, in 1 iterations. Remains : 84/84 places, 130/132 transitions.
Support contains 55 out of 84 places after structural reductions.
[2022-05-17 21:00:40] [INFO ] Flatten gal took : 30 ms
[2022-05-17 21:00:40] [INFO ] Flatten gal took : 13 ms
[2022-05-17 21:00:40] [INFO ] Input system was already deterministic with 130 transitions.
Incomplete random walk after 10000 steps, including 2 resets, run finished after 486 ms. (steps per millisecond=20 ) properties (out of 56) seen :39
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 4 ms. (steps per millisecond=250 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 4 ms. (steps per millisecond=250 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 4 ms. (steps per millisecond=250 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 4 ms. (steps per millisecond=250 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 4 ms. (steps per millisecond=250 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 15 ms. (steps per millisecond=66 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 19 ms. (steps per millisecond=52 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 4 ms. (steps per millisecond=250 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=200 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 4 ms. (steps per millisecond=250 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 4 ms. (steps per millisecond=250 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=200 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=166 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 4 ms. (steps per millisecond=250 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=200 ) properties (out of 17) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 3 ms. (steps per millisecond=333 ) properties (out of 17) seen :0
Running SMT prover for 17 properties.
[2022-05-17 21:00:41] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:41] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:41] [INFO ] After 27ms SMT Verify possible using all constraints in real domain returned unsat :17 sat :0
Fused 17 Parikh solutions to 0 different solutions.
Parikh walk visited 0 properties in 1 ms.
Successfully simplified 17 atomic propositions for a total of 13 simplifications.
Initial state reduction rules removed 1 formulas.
FORMULA MAPKbis-PT-5310-CTLCardinality-00 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5310-CTLCardinality-02 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2022-05-17 21:00:41] [INFO ] Initial state reduction rules for CTL removed 2 formulas.
[2022-05-17 21:00:41] [INFO ] Flatten gal took : 8 ms
[2022-05-17 21:00:41] [INFO ] Initial state reduction rules for CTL removed 2 formulas.
[2022-05-17 21:00:41] [INFO ] Initial state reduction rules for CTL removed 1 formulas.
FORMULA MAPKbis-PT-5310-CTLCardinality-13 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5310-CTLCardinality-09 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5310-CTLCardinality-07 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5310-CTLCardinality-05 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5310-CTLCardinality-03 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2022-05-17 21:00:41] [INFO ] Flatten gal took : 9 ms
[2022-05-17 21:00:41] [INFO ] Input system was already deterministic with 130 transitions.
Support contains 29 out of 84 places (down from 40) after GAL structural reductions.
Computed a total of 0 stabilizing places and 0 stable transitions
Starting structural reductions in LTL mode, iteration 0 : 84/84 places, 130/130 transitions.
Applied a total of 0 rules in 2 ms. Remains 84 /84 variables (removed 0) and now considering 130/130 (removed 0) transitions.
[2022-05-17 21:00:41] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:41] [INFO ] Computed 42 place invariants in 3 ms
[2022-05-17 21:00:41] [INFO ] Implicit Places using invariants in 87 ms returned []
[2022-05-17 21:00:41] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:41] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:41] [INFO ] State equation strengthened by 42 read => feed constraints.
[2022-05-17 21:00:41] [INFO ] Implicit Places using invariants and state equation in 95 ms returned []
Implicit Place search using SMT with State Equation took 184 ms to find 0 implicit places.
[2022-05-17 21:00:41] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:41] [INFO ] Computed 42 place invariants in 3 ms
[2022-05-17 21:00:41] [INFO ] Dead Transitions using invariants and state equation in 70 ms found 0 transitions.
Finished structural reductions, in 1 iterations. Remains : 84/84 places, 130/130 transitions.
[2022-05-17 21:00:41] [INFO ] Flatten gal took : 7 ms
[2022-05-17 21:00:41] [INFO ] Flatten gal took : 7 ms
[2022-05-17 21:00:41] [INFO ] Input system was already deterministic with 130 transitions.
[2022-05-17 21:00:41] [INFO ] Flatten gal took : 7 ms
[2022-05-17 21:00:41] [INFO ] Flatten gal took : 7 ms
[2022-05-17 21:00:41] [INFO ] Time to serialize gal into /tmp/CTLCardinality2054351303286477572.gal : 4 ms
[2022-05-17 21:00:41] [INFO ] Time to serialize properties into /tmp/CTLCardinality750123890151316049.ctl : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/CTLCardinality2054351303286477572.gal' '-t' 'CGAL' '-ctl' '/tmp/CTLCardinality750123890151316049.ctl' '--gen-order' 'FOLLOW'

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/C...273
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,3.84641e+12,0.520269,24164,2,285,5,95918,6,0,469,111066,0


Converting to forward existential form...Done !
original formula: AG((!(E(EG(((ERK_equals_1==1)&&(MEK1_2_equals_1==1))) U AG(((AP1_equals_1==0)||(Growth_Arrest_equals_1==1))))) + (EX(((((FOS_equals_1==0)...408
=> equivalent forward existential formula: ([((FwdU(Init,TRUE) * !(!(E(EG(((ERK_equals_1==1)&&(MEK1_2_equals_1==1))) U !(E(TRUE U !(((AP1_equals_1==0)||(Gr...641
Reverse transition relation is NOT exact ! Due to transitions t23, t24, t29, t42, t58, t67, t69, t74, t86, t87, t90, t102, t103, t106, t108, t109, t117, t1...277
(forward)formula 0,1,1.91695,73892,1,0,371,326635,308,182,3193,572999,380
FORMULA MAPKbis-PT-5310-CTLCardinality-01 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

Starting structural reductions in SI_CTL mode, iteration 0 : 84/84 places, 130/130 transitions.
Applied a total of 0 rules in 18 ms. Remains 84 /84 variables (removed 0) and now considering 130/130 (removed 0) transitions.
[2022-05-17 21:00:43] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:43] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:43] [INFO ] Implicit Places using invariants in 75 ms returned []
[2022-05-17 21:00:43] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:43] [INFO ] Computed 42 place invariants in 0 ms
[2022-05-17 21:00:43] [INFO ] State equation strengthened by 42 read => feed constraints.
[2022-05-17 21:00:43] [INFO ] Implicit Places using invariants and state equation in 95 ms returned []
Implicit Place search using SMT with State Equation took 173 ms to find 0 implicit places.
[2022-05-17 21:00:43] [INFO ] Redundant transitions in 3 ms returned []
[2022-05-17 21:00:43] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:43] [INFO ] Computed 42 place invariants in 0 ms
[2022-05-17 21:00:43] [INFO ] Dead Transitions using invariants and state equation in 76 ms found 0 transitions.
Finished structural reductions, in 1 iterations. Remains : 84/84 places, 130/130 transitions.
[2022-05-17 21:00:44] [INFO ] Flatten gal took : 7 ms
[2022-05-17 21:00:44] [INFO ] Flatten gal took : 7 ms
[2022-05-17 21:00:44] [INFO ] Input system was already deterministic with 130 transitions.
[2022-05-17 21:00:44] [INFO ] Flatten gal took : 7 ms
[2022-05-17 21:00:44] [INFO ] Flatten gal took : 10 ms
[2022-05-17 21:00:44] [INFO ] Time to serialize gal into /tmp/CTLCardinality14491018818158967916.gal : 4 ms
[2022-05-17 21:00:44] [INFO ] Time to serialize properties into /tmp/CTLCardinality13983176527829996489.ctl : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/CTLCardinality14491018818158967916.gal' '-t' 'CGAL' '-ctl' '/tmp/CTLCardinality13983176527829996489.ctl' '--gen-order' 'FOLLOW'

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/C...276
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,3.84641e+12,0.528294,24348,2,285,5,95918,6,0,469,111066,0


Converting to forward existential form...Done !
original formula: AF(AG(AF((((GRB2_equals_0==0)||(GRB2_equals_0==1))&&((ELK1_equals_1==0)||(DUSP1_equals_0==1))))))
=> equivalent forward existential formula: [FwdG(Init,!(!(E(TRUE U !(!(EG(!((((GRB2_equals_0==0)||(GRB2_equals_0==1))&&((ELK1_equals_1==0)||(DUSP1_equals_0...178
Reverse transition relation is NOT exact ! Due to transitions t23, t24, t29, t42, t58, t67, t69, t74, t86, t87, t90, t102, t103, t106, t108, t109, t117, t1...277
(forward)formula 0,0,1.35318,44208,1,0,292,198681,290,143,3301,236929,300
FORMULA MAPKbis-PT-5310-CTLCardinality-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

Starting structural reductions in LTL mode, iteration 0 : 84/84 places, 130/130 transitions.
Applied a total of 0 rules in 4 ms. Remains 84 /84 variables (removed 0) and now considering 130/130 (removed 0) transitions.
[2022-05-17 21:00:45] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:45] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:45] [INFO ] Implicit Places using invariants in 66 ms returned []
[2022-05-17 21:00:45] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:45] [INFO ] Computed 42 place invariants in 3 ms
[2022-05-17 21:00:45] [INFO ] State equation strengthened by 42 read => feed constraints.
[2022-05-17 21:00:45] [INFO ] Implicit Places using invariants and state equation in 97 ms returned []
Implicit Place search using SMT with State Equation took 165 ms to find 0 implicit places.
[2022-05-17 21:00:45] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:45] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:45] [INFO ] Dead Transitions using invariants and state equation in 63 ms found 0 transitions.
Finished structural reductions, in 1 iterations. Remains : 84/84 places, 130/130 transitions.
[2022-05-17 21:00:45] [INFO ] Flatten gal took : 6 ms
[2022-05-17 21:00:45] [INFO ] Flatten gal took : 6 ms
[2022-05-17 21:00:45] [INFO ] Input system was already deterministic with 130 transitions.
[2022-05-17 21:00:45] [INFO ] Flatten gal took : 6 ms
[2022-05-17 21:00:45] [INFO ] Flatten gal took : 6 ms
[2022-05-17 21:00:45] [INFO ] Time to serialize gal into /tmp/CTLCardinality9241705969272563.gal : 1 ms
[2022-05-17 21:00:45] [INFO ] Time to serialize properties into /tmp/CTLCardinality1100617824384193166.ctl : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/CTLCardinality9241705969272563.gal' '-t' 'CGAL' '-ctl' '/tmp/CTLCardinality1100617824384193166.ctl' '--gen-order' 'FOLLOW'

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/C...271
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,3.84641e+12,0.530986,24320,2,285,5,95918,6,0,469,111066,0


Converting to forward existential form...Done !
original formula: EF((EX((JNK_equals_1==0)) * AX(AG((MAX_equals_0==1)))))
=> equivalent forward existential formula: [((FwdU(Init,TRUE) * EX((JNK_equals_1==0))) * !(EX(!(!(E(TRUE U !((MAX_equals_0==1))))))))] != FALSE
Reverse transition relation is NOT exact ! Due to transitions t23, t24, t29, t42, t58, t67, t69, t74, t86, t87, t90, t102, t103, t106, t108, t109, t117, t1...277
(forward)formula 0,0,0.736957,24700,1,0,295,95918,282,144,3103,111066,300
FORMULA MAPKbis-PT-5310-CTLCardinality-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

Starting structural reductions in LTL mode, iteration 0 : 84/84 places, 130/130 transitions.
Applied a total of 0 rules in 2 ms. Remains 84 /84 variables (removed 0) and now considering 130/130 (removed 0) transitions.
[2022-05-17 21:00:46] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:46] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:46] [INFO ] Implicit Places using invariants in 59 ms returned []
[2022-05-17 21:00:46] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:46] [INFO ] Computed 42 place invariants in 0 ms
[2022-05-17 21:00:46] [INFO ] State equation strengthened by 42 read => feed constraints.
[2022-05-17 21:00:46] [INFO ] Implicit Places using invariants and state equation in 97 ms returned []
Implicit Place search using SMT with State Equation took 157 ms to find 0 implicit places.
[2022-05-17 21:00:46] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:46] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:46] [INFO ] Dead Transitions using invariants and state equation in 62 ms found 0 transitions.
Finished structural reductions, in 1 iterations. Remains : 84/84 places, 130/130 transitions.
[2022-05-17 21:00:46] [INFO ] Flatten gal took : 5 ms
[2022-05-17 21:00:46] [INFO ] Flatten gal took : 8 ms
[2022-05-17 21:00:46] [INFO ] Input system was already deterministic with 130 transitions.
[2022-05-17 21:00:46] [INFO ] Flatten gal took : 5 ms
[2022-05-17 21:00:46] [INFO ] Flatten gal took : 6 ms
[2022-05-17 21:00:46] [INFO ] Time to serialize gal into /tmp/CTLCardinality8297291720226486587.gal : 1 ms
[2022-05-17 21:00:46] [INFO ] Time to serialize properties into /tmp/CTLCardinality17296368205869597753.ctl : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/CTLCardinality8297291720226486587.gal' '-t' 'CGAL' '-ctl' '/tmp/CTLCardinality17296368205869597753.ctl' '--gen-order' 'FOLLOW'

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/C...275
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,3.84641e+12,0.525236,24420,2,285,5,95918,6,0,469,111066,0


Converting to forward existential form...Done !
original formula: AX(AG((AF((Apoptosis_equals_0==1)) + (GRB2_equals_1==1))))
=> equivalent forward existential formula: [FwdG((FwdU(EY(Init),TRUE) * !((GRB2_equals_1==1))),!((Apoptosis_equals_0==1)))] = FALSE
Hit Full ! (commute/partial/dont) 125/0/5
(forward)formula 0,0,0.909268,28380,1,0,11,112804,23,4,2684,133439,12
FORMULA MAPKbis-PT-5310-CTLCardinality-10 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

Starting structural reductions in LTL mode, iteration 0 : 84/84 places, 130/130 transitions.
Applied a total of 0 rules in 6 ms. Remains 84 /84 variables (removed 0) and now considering 130/130 (removed 0) transitions.
[2022-05-17 21:00:47] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:47] [INFO ] Computed 42 place invariants in 0 ms
[2022-05-17 21:00:47] [INFO ] Implicit Places using invariants in 77 ms returned []
[2022-05-17 21:00:47] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:47] [INFO ] Computed 42 place invariants in 0 ms
[2022-05-17 21:00:47] [INFO ] State equation strengthened by 42 read => feed constraints.
[2022-05-17 21:00:47] [INFO ] Implicit Places using invariants and state equation in 92 ms returned []
Implicit Place search using SMT with State Equation took 170 ms to find 0 implicit places.
[2022-05-17 21:00:47] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:47] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:47] [INFO ] Dead Transitions using invariants and state equation in 70 ms found 0 transitions.
Finished structural reductions, in 1 iterations. Remains : 84/84 places, 130/130 transitions.
[2022-05-17 21:00:47] [INFO ] Flatten gal took : 6 ms
[2022-05-17 21:00:47] [INFO ] Flatten gal took : 6 ms
[2022-05-17 21:00:47] [INFO ] Input system was already deterministic with 130 transitions.
[2022-05-17 21:00:47] [INFO ] Flatten gal took : 5 ms
[2022-05-17 21:00:47] [INFO ] Flatten gal took : 6 ms
[2022-05-17 21:00:47] [INFO ] Time to serialize gal into /tmp/CTLCardinality5861332629740551343.gal : 1 ms
[2022-05-17 21:00:47] [INFO ] Time to serialize properties into /tmp/CTLCardinality6514625920378168647.ctl : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/CTLCardinality5861332629740551343.gal' '-t' 'CGAL' '-ctl' '/tmp/CTLCardinality6514625920378168647.ctl' '--gen-order' 'FOLLOW'

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/C...274
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,3.84641e+12,0.519998,24200,2,285,5,95918,6,0,469,111066,0


Converting to forward existential form...Done !
original formula: A(AG((A(!(((CREB_equals_1==1)||(PDK1_equals_1==1))) U ((GADD45_equals_0==0)||(MYC_equals_1==1))) + (p14_equals_0==1))) U (AG(((EF((PDK1_e...364
=> equivalent forward existential formula: [((Init * !(EG(!((!(E(TRUE U !(((E(TRUE U (PDK1_equals_1==1)) + EX(TRUE)) + ((EX(TRUE) * !(EG(!((PLCG_equals_1==...1120
Reverse transition relation is NOT exact ! Due to transitions t23, t24, t29, t42, t58, t67, t69, t74, t86, t87, t90, t102, t103, t106, t108, t109, t117, t1...277
(forward)formula 0,1,1.23657,43996,1,0,356,189701,306,180,3183,312882,369
FORMULA MAPKbis-PT-5310-CTLCardinality-11 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

Starting structural reductions in LTL mode, iteration 0 : 84/84 places, 130/130 transitions.
Applied a total of 0 rules in 2 ms. Remains 84 /84 variables (removed 0) and now considering 130/130 (removed 0) transitions.
[2022-05-17 21:00:49] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:49] [INFO ] Computed 42 place invariants in 0 ms
[2022-05-17 21:00:49] [INFO ] Implicit Places using invariants in 57 ms returned []
[2022-05-17 21:00:49] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:49] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:49] [INFO ] State equation strengthened by 42 read => feed constraints.
[2022-05-17 21:00:49] [INFO ] Implicit Places using invariants and state equation in 86 ms returned []
Implicit Place search using SMT with State Equation took 144 ms to find 0 implicit places.
[2022-05-17 21:00:49] [INFO ] Flow matrix only has 84 transitions (discarded 46 similar events)
// Phase 1: matrix 84 rows 84 cols
[2022-05-17 21:00:49] [INFO ] Computed 42 place invariants in 1 ms
[2022-05-17 21:00:49] [INFO ] Dead Transitions using invariants and state equation in 67 ms found 0 transitions.
Finished structural reductions, in 1 iterations. Remains : 84/84 places, 130/130 transitions.
[2022-05-17 21:00:49] [INFO ] Flatten gal took : 5 ms
[2022-05-17 21:00:49] [INFO ] Flatten gal took : 5 ms
[2022-05-17 21:00:49] [INFO ] Input system was already deterministic with 130 transitions.
[2022-05-17 21:00:49] [INFO ] Flatten gal took : 4 ms
[2022-05-17 21:00:49] [INFO ] Flatten gal took : 4 ms
[2022-05-17 21:00:49] [INFO ] Time to serialize gal into /tmp/CTLCardinality8164542634836406112.gal : 1 ms
[2022-05-17 21:00:49] [INFO ] Time to serialize properties into /tmp/CTLCardinality14307900183012798229.ctl : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/CTLCardinality8164542634836406112.gal' '-t' 'CGAL' '-ctl' '/tmp/CTLCardinality14307900183012798229.ctl' '--gen-order' 'FOLLOW'

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202205111006/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/C...275
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,3.84641e+12,0.510162,24492,2,285,5,95918,6,0,469,111066,0


Converting to forward existential form...Done !
original formula: EF((AF(EG((((MAP3K1_3_equals_1==0)||(MAP3K1_3_equals_1==1))&&((AP1_equals_1==0)||(p21_equals_1==1))))) * AX(FALSE)))
=> equivalent forward existential formula: [((FwdU(Init,TRUE) * !(EG(!(EG((((MAP3K1_3_equals_1==0)||(MAP3K1_3_equals_1==1))&&((AP1_equals_1==0)||(p21_equal...198
Reverse transition relation is NOT exact ! Due to transitions t23, t24, t29, t42, t58, t67, t69, t74, t86, t87, t90, t102, t103, t106, t108, t109, t117, t1...277
(forward)formula 0,0,0.592006,24492,1,0,278,95918,275,133,2987,111066,266
FORMULA MAPKbis-PT-5310-CTLCardinality-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

[2022-05-17 21:00:50] [INFO ] Flatten gal took : 8 ms
[2022-05-17 21:00:50] [INFO ] Flatten gal took : 5 ms
Total runtime 10161 ms.

BK_STOP 1652821250066

--------------------
content from stderr:

+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution CTLCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
++ perl -pe 's/.*\.//g'
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination CTLCardinality -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5310"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is MAPKbis-PT-5310, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r132-tall-165271821100633"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5310.tgz
mv MAPKbis-PT-5310 execution
cd execution
if [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "UpperBounds" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] || [ "CTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;