Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2022-input.r029-tall-165251940600333.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2022-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
......................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool gold2021
Input is CANConstruction-PT-060, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r029-tall-165251940600333
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 5.7M
-rw-r--r-- 1 mcc users 8.5K Apr 29 12:34 CTLCardinality.txt
-rw-r--r-- 1 mcc users 74K Apr 29 12:34 CTLCardinality.xml
-rw-r--r-- 1 mcc users 8.7K Apr 29 12:16 CTLFireability.txt
-rw-r--r-- 1 mcc users 68K Apr 29 12:16 CTLFireability.xml
-rw-r--r-- 1 mcc users 5.2K May 9 07:11 LTLCardinality.txt
-rw-r--r-- 1 mcc users 28K May 9 07:11 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.0K May 9 07:11 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 9 07:11 LTLFireability.xml
-rw-r--r-- 1 mcc users 1.9K May 9 07:11 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 9 07:11 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 10 09:33 equiv_col
-rw-r--r-- 1 mcc users 4 May 10 09:33 instance
-rw-r--r-- 1 mcc users 6 May 10 09:33 iscolored
-rw-r--r-- 1 mcc users 5.4M May 10 09:33 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1652538548158

Running Version 0
[2022-05-14 14:29:09] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2022-05-14 14:29:09] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-05-14 14:29:10] [INFO ] Load time of PNML (sax parser for PT used): 503 ms
[2022-05-14 14:29:10] [INFO ] Transformed 7922 places.
[2022-05-14 14:29:10] [INFO ] Transformed 14880 transitions.
[2022-05-14 14:29:10] [INFO ] Parsed PT model containing 7922 places and 14880 transitions in 684 ms.
Incomplete random walk after 10000 steps, including 8 resets, run finished after 2459 ms. (steps per millisecond=4 ) properties (out of 7922) seen :2565
Running SMT prover for 5357 properties.
// Phase 1: matrix 14880 rows 7922 cols
[2022-05-14 14:29:13] [INFO ] Computed 121 place invariants in 206 ms
[2022-05-14 14:29:38] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
Fused 5357 Parikh solutions to 1 different solutions.
Support contains 5357 out of 7922 places. Attempting structural reductions.
Starting structural reductions, iteration 0 : 7922/7922 places, 14880/14880 transitions.
Drop transitions removed 264 transitions
Trivial Post-agglo rules discarded 264 transitions
Performed 264 trivial Post agglomeration. Transition count delta: 264
Iterating post reduction 0 with 264 rules applied. Total rules applied 264 place count 7922 transition count 14616
Reduce places removed 264 places and 0 transitions.
Iterating post reduction 1 with 264 rules applied. Total rules applied 528 place count 7658 transition count 14616
Discarding 879 places :
Symmetric choice reduction at 2 with 879 rule applications. Total rules 1407 place count 6779 transition count 12858
Iterating global reduction 2 with 879 rules applied. Total rules applied 2286 place count 6779 transition count 12858
Performed 60 Post agglomeration using F-continuation condition.Transition count delta: 60
Deduced a syphon composed of 60 places in 17 ms
Reduce places removed 60 places and 0 transitions.
Iterating global reduction 2 with 120 rules applied. Total rules applied 2406 place count 6719 transition count 12798
Performed 34 Post agglomeration using F-continuation condition.Transition count delta: -376
Deduced a syphon composed of 34 places in 4 ms
Reduce places removed 34 places and 0 transitions.
Iterating global reduction 2 with 68 rules applied. Total rules applied 2474 place count 6685 transition count 13174
Partial Free-agglomeration rule applied 52 times.
Drop transitions removed 52 transitions
Iterating global reduction 2 with 52 rules applied. Total rules applied 2526 place count 6685 transition count 13174
Applied a total of 2526 rules in 1982 ms. Remains 6685 /7922 variables (removed 1237) and now considering 13174/14880 (removed 1706) transitions.
Finished structural reductions, in 1 iterations. Remains : 6685/7922 places, 13174/14880 transitions.
[2022-05-14 14:29:41] [INFO ] Flatten gal took : 637 ms
[2022-05-14 14:29:41] [INFO ] Flatten gal took : 409 ms
[2022-05-14 14:29:42] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality6315964616482924307.gal : 136 ms
[2022-05-14 14:29:42] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality11354004407914439057.prop : 11 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality6315964616482924307.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality11354004407914439057.prop, --nowitness, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality6315964616482924307.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality11354004407914439057.prop --nowitness --gen-order FOLLOW
Loading property file /tmp/ReachabilityCardinality11354004407914439057.prop.
Detected timeout of ITS tools.
[2022-05-14 14:29:57] [INFO ] Flatten gal took : 387 ms
[2022-05-14 14:29:57] [INFO ] Applying decomposition
[2022-05-14 14:29:58] [INFO ] Flatten gal took : 349 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph15662445608153047402.txt, -o, /tmp/graph15662445608153047402.bin, -w, /tmp/graph15662445608153047402.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph15662445608153047402.bin, -l, -1, -v, -w, /tmp/graph15662445608153047402.weights, -q, 0, -e, 0.001], workingDir=null]
[2022-05-14 14:29:59] [INFO ] Decomposing Gal with order
[2022-05-14 14:29:59] [INFO ] Rewriting arrays to variables to allow decomposition.
[2022-05-14 14:30:01] [INFO ] Removed a total of 7226 redundant transitions.
[2022-05-14 14:30:01] [INFO ] Flatten gal took : 1332 ms
[2022-05-14 14:30:02] [INFO ] Fuse similar labels procedure discarded/fused a total of 3854 labels/synchronizations in 486 ms.
[2022-05-14 14:30:02] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality8185891036363671758.gal : 93 ms
[2022-05-14 14:30:02] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality11844453565129350271.prop : 29 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality8185891036363671758.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality11844453565129350271.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality8185891036363671758.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality11844453565129350271.prop --nowitness
Loading property file /tmp/ReachabilityCardinality11844453565129350271.prop.
SDD proceeding with computation,5357 properties remain. new max is 4
SDD size :1 after 1
SDD proceeding with computation,5357 properties remain. new max is 8
SDD size :1 after 1
SDD proceeding with computation,5357 properties remain. new max is 16
SDD size :1 after 1
SDD proceeding with computation,5357 properties remain. new max is 32
SDD size :1 after 1
SDD proceeding with computation,5357 properties remain. new max is 64
SDD size :1 after 1
SDD proceeding with computation,5357 properties remain. new max is 128
SDD size :1 after 1
SDD proceeding with computation,5357 properties remain. new max is 256
SDD size :1 after 1
SDD proceeding with computation,5357 properties remain. new max is 512
SDD size :1 after 1
Detected timeout of ITS tools.
Built C files in :
/tmp/ltsmin15446355093603911874
[2022-05-14 14:30:18] [INFO ] Built C files in 184ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin15446355093603911874
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin15446355093603911874]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin15446355093603911874] killed by timeout after 1 SECONDS
java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin15446355093603911874] killed by timeout after 1 SECONDS
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:79)
at java.base/java.lang.Thread.run(Thread.java:834)
Finished random walk after 120871 steps, including 240 resets, run visited all 5357 properties in 6288 ms. (steps per millisecond=19 )
Able to resolve query StableMarking after proving 7922 properties.
FORMULA StableMarking FALSE TECHNIQUES RANDOM_WALK TOPOLOGICAL

BK_STOP 1652538626770

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StableMarking = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StableMarking -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="CANConstruction-PT-060"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="gold2021"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool gold2021"
echo " Input is CANConstruction-PT-060, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r029-tall-165251940600333"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/CANConstruction-PT-060.tgz
mv CANConstruction-PT-060 execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StableMarking.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;