fond
Model Checking Contest 2022
12th edition, Bergen, Norway, June 21, 2022
Execution of r006-tajo-165245689200365
Last Updated
Jun 22, 2022

About the Execution of ITS-Tools for Angiogenesis-PT-50

Execution Summary
Max Memory
Used (MB)
Time wait (ms) CPU Usage (ms) I/O Wait (ms) Computed Result Execution
Status
178.000 3394.00 6787.00 37.50 50 50 25 50 50 25 50 50 50 50 50 50 50 50 50 50 normal

Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/mnt/tpsp/fkordon/mcc2022-input.r006-tajo-165245689200365.qcow2', fmt=qcow2 size=4294967296 backing_file='/mnt/tpsp/fkordon/mcc2022-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is Angiogenesis-PT-50, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r006-tajo-165245689200365
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 272K
-rw-r--r-- 1 mcc users 7.6K Apr 29 19:36 CTLCardinality.txt
-rw-r--r-- 1 mcc users 74K Apr 29 19:36 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.9K Apr 29 19:35 CTLFireability.txt
-rw-r--r-- 1 mcc users 58K Apr 29 19:35 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 10 09:33 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.9K May 9 07:03 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K May 9 07:03 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 9 07:03 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 9 07:03 LTLFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 9 07:03 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 9 07:03 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 10 09:33 equiv_col
-rw-r--r-- 1 mcc users 3 May 10 09:33 instance
-rw-r--r-- 1 mcc users 6 May 10 09:33 iscolored
-rw-r--r-- 1 mcc users 33K May 10 09:33 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-00
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-01
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-02
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-03
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-04
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-05
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-06
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-07
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-08
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-09
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-10
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-11
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-12
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-13
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-14
FORMULA_NAME Angiogenesis-PT-50-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1652659953767

Running Version 202205111006
[2022-05-16 00:12:35] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2022-05-16 00:12:35] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2022-05-16 00:12:35] [INFO ] Load time of PNML (sax parser for PT used): 58 ms
[2022-05-16 00:12:35] [INFO ] Transformed 39 places.
[2022-05-16 00:12:35] [INFO ] Transformed 64 transitions.
[2022-05-16 00:12:35] [INFO ] Parsed PT model containing 39 places and 64 transitions in 158 ms.
Parsed 16 properties from file /home/mcc/execution/UpperBounds.xml in 5 ms.
// Phase 1: matrix 64 rows 39 cols
[2022-05-16 00:12:35] [INFO ] Computed 8 place invariants in 12 ms
FORMULA Angiogenesis-PT-50-UpperBounds-14 50 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-50-UpperBounds-11 50 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-50-UpperBounds-08 50 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-50-UpperBounds-04 50 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-50-UpperBounds-00 50 TECHNIQUES TOPOLOGICAL INITIAL_STATE
Incomplete random walk after 10044 steps, including 2 resets, run finished after 18 ms. (steps per millisecond=558 ) properties (out of 11) seen :251
FORMULA Angiogenesis-PT-50-UpperBounds-15 50 TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Angiogenesis-PT-50-UpperBounds-12 50 TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Angiogenesis-PT-50-UpperBounds-10 50 TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Angiogenesis-PT-50-UpperBounds-07 50 TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Angiogenesis-PT-50-UpperBounds-06 50 TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 11 ms. (steps per millisecond=909 ) properties (out of 6) seen :17
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 11 ms. (steps per millisecond=909 ) properties (out of 6) seen :13
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 8 ms. (steps per millisecond=1250 ) properties (out of 6) seen :13
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 9 ms. (steps per millisecond=1111 ) properties (out of 6) seen :10
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=1428 ) properties (out of 6) seen :30
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=1428 ) properties (out of 6) seen :16
// Phase 1: matrix 64 rows 39 cols
[2022-05-16 00:12:35] [INFO ] Computed 8 place invariants in 6 ms
[2022-05-16 00:12:35] [INFO ] [Real]Absence check using 8 positive place invariants in 5 ms returned sat
[2022-05-16 00:12:35] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:35] [INFO ] [Real]Absence check using state equation in 26 ms returned sat
[2022-05-16 00:12:35] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 8 ms.
[2022-05-16 00:12:35] [INFO ] Solution in real domain found non-integer solution.
[2022-05-16 00:12:35] [INFO ] [Nat]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:35] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:35] [INFO ] [Nat]Absence check using state equation in 18 ms returned sat
[2022-05-16 00:12:35] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 5 ms.
[2022-05-16 00:12:35] [INFO ] Added : 55 causal constraints over 11 iterations in 65 ms. Result :sat
Minimization took 16 ms.
[2022-05-16 00:12:35] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:35] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:35] [INFO ] [Real]Absence check using state equation in 12 ms returned sat
[2022-05-16 00:12:35] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 5 ms.
[2022-05-16 00:12:35] [INFO ] Solution in real domain found non-integer solution.
[2022-05-16 00:12:35] [INFO ] [Nat]Absence check using 8 positive place invariants in 1 ms returned sat
[2022-05-16 00:12:35] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:35] [INFO ] [Nat]Absence check using state equation in 12 ms returned sat
[2022-05-16 00:12:35] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 6 ms.
[2022-05-16 00:12:35] [INFO ] Added : 55 causal constraints over 11 iterations in 67 ms. Result :sat
Minimization took 19 ms.
[2022-05-16 00:12:36] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:36] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:36] [INFO ] [Real]Absence check using state equation in 13 ms returned sat
[2022-05-16 00:12:36] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 4 ms.
[2022-05-16 00:12:36] [INFO ] Solution in real domain found non-integer solution.
[2022-05-16 00:12:36] [INFO ] [Nat]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:36] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:36] [INFO ] [Nat]Absence check using state equation in 17 ms returned sat
[2022-05-16 00:12:36] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 5 ms.
[2022-05-16 00:12:36] [INFO ] Added : 54 causal constraints over 11 iterations in 64 ms. Result :sat
Minimization took 28 ms.
[2022-05-16 00:12:36] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:36] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:36] [INFO ] [Real]Absence check using state equation in 11 ms returned sat
[2022-05-16 00:12:36] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 3 ms.
[2022-05-16 00:12:36] [INFO ] Solution in real domain found non-integer solution.
[2022-05-16 00:12:36] [INFO ] [Nat]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:36] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:36] [INFO ] [Nat]Absence check using state equation in 14 ms returned sat
[2022-05-16 00:12:36] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 4 ms.
[2022-05-16 00:12:36] [INFO ] Added : 55 causal constraints over 11 iterations in 58 ms. Result :sat
Minimization took 20 ms.
[2022-05-16 00:12:36] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:36] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:36] [INFO ] [Real]Absence check using state equation in 23 ms returned sat
[2022-05-16 00:12:36] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 8 ms.
[2022-05-16 00:12:36] [INFO ] Solution in real domain found non-integer solution.
[2022-05-16 00:12:36] [INFO ] [Nat]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:36] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:36] [INFO ] [Nat]Absence check using state equation in 14 ms returned sat
[2022-05-16 00:12:36] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 4 ms.
[2022-05-16 00:12:36] [INFO ] Added : 54 causal constraints over 11 iterations in 74 ms. Result :sat
Minimization took 15 ms.
[2022-05-16 00:12:36] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:36] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:36] [INFO ] [Real]Absence check using state equation in 19 ms returned sat
[2022-05-16 00:12:36] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 5 ms.
[2022-05-16 00:12:36] [INFO ] Solution in real domain found non-integer solution.
[2022-05-16 00:12:36] [INFO ] [Nat]Absence check using 8 positive place invariants in 2 ms returned sat
[2022-05-16 00:12:36] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2022-05-16 00:12:36] [INFO ] [Nat]Absence check using state equation in 13 ms returned sat
[2022-05-16 00:12:36] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 5 ms.
[2022-05-16 00:12:36] [INFO ] Added : 55 causal constraints over 11 iterations in 55 ms. Result :sat
Minimization took 14 ms.
Current structural bounds on expressions (after SMT) : [50, 25, 50, 25, 50, 50] Max seen :[2, 1, 8, 4, 26, 2]
FORMULA Angiogenesis-PT-50-UpperBounds-13 50 TECHNIQUES TOPOLOGICAL PARIKH_WALK
FORMULA Angiogenesis-PT-50-UpperBounds-09 50 TECHNIQUES TOPOLOGICAL PARIKH_WALK
FORMULA Angiogenesis-PT-50-UpperBounds-05 25 TECHNIQUES TOPOLOGICAL PARIKH_WALK
FORMULA Angiogenesis-PT-50-UpperBounds-03 50 TECHNIQUES TOPOLOGICAL PARIKH_WALK
FORMULA Angiogenesis-PT-50-UpperBounds-02 25 TECHNIQUES TOPOLOGICAL PARIKH_WALK
FORMULA Angiogenesis-PT-50-UpperBounds-01 50 TECHNIQUES TOPOLOGICAL PARIKH_WALK
All properties solved without resorting to model-checking.
Total runtime 1958 ms.

BK_STOP 1652659957161

--------------------
content from stderr:

+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ UpperBounds = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination UpperBounds -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-50"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is Angiogenesis-PT-50, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r006-tajo-165245689200365"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-50.tgz
mv Angiogenesis-PT-50 execution
cd execution
if [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "UpperBounds" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] || [ "UpperBounds" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] ; then
echo "FORMULA_NAME UpperBounds"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;