About the Execution of ITS-Tools for ViralEpidemic-PT-S04D1C1A06
| Execution Summary | |||||
| Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
| 12753.304 | 3600000.00 | 3730468.00 | 9982.50 | ??T??????F?F??TT | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/data/fkordon/mcc2021-input.r273-smll-162123880000297.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2021-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is ViralEpidemic-PT-S04D1C1A06, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r273-smll-162123880000297
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 39M
-rw-r--r-- 1 mcc users 24K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 143K May 10 09:44 CTLCardinality.xml
-rw-r--r-- 1 mcc users 18K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 110K May 10 09:44 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.8K May 6 14:48 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.2K Mar 28 16:48 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K Mar 28 16:48 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K Mar 28 16:48 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Mar 28 16:48 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K Mar 27 15:20 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 17K Mar 27 15:20 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 3.7K Mar 26 06:23 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 20K Mar 26 06:23 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Mar 22 08:17 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K Mar 22 08:17 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 5 16:52 equiv_col
-rw-r--r-- 1 mcc users 11 May 5 16:52 instance
-rw-r--r-- 1 mcc users 6 May 5 16:52 iscolored
-rw-r--r-- 1 mcc users 39M May 5 16:52 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-00
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-01
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-02
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-03
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-04
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-05
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-06
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-07
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-08
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-09
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-10
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-11
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-12
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-13
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-14
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-CTLCardinality-15
=== Now, execution of the tool begins
BK_START 1621536878945
Running Version 0
[2021-05-20 18:54:41] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLCardinality, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2021-05-20 18:54:41] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-20 18:54:44] [INFO ] Load time of PNML (sax parser for PT used): 2179 ms
[2021-05-20 18:54:44] [INFO ] Transformed 32767 places.
[2021-05-20 18:54:44] [INFO ] Transformed 49149 transitions.
[2021-05-20 18:54:44] [INFO ] Found NUPN structural information;
[2021-05-20 18:54:44] [INFO ] Parsed PT model containing 32767 places and 49149 transitions in 2578 ms.
Parsed 16 properties from file /home/mcc/execution/CTLCardinality.xml in 356 ms.
Support contains 893 out of 32767 places. Attempting structural reductions.
Starting structural reductions, iteration 0 : 32767/32767 places, 49149/49149 transitions.
Applied a total of 0 rules in 3244 ms. Remains 32767 /32767 variables (removed 0) and now considering 49149/49149 (removed 0) transitions.
// Phase 1: matrix 49149 rows 32767 cols
[2021-05-20 18:55:23] [INFO ] Invariants computation overflowed in 35122 ms
[2021-05-20 18:55:30] [INFO ] Implicit Places using invariants in 41773 ms returned []
Implicit Place search using SMT only with invariants took 41814 ms to find 0 implicit places.
// Phase 1: matrix 49149 rows 32767 cols
[2021-05-20 18:56:07] [INFO ] Invariants computation overflowed in 36613 ms
[2021-05-20 18:56:13] [INFO ] Dead Transitions using invariants and state equation in 42759 ms returned []
Finished structural reductions, in 1 iterations. Remains : 32767/32767 places, 49149/49149 transitions.
[2021-05-20 18:56:16] [INFO ] Flatten gal took : 2237 ms
[2021-05-20 18:56:18] [INFO ] Flatten gal took : 1776 ms
[2021-05-20 18:56:22] [INFO ] Input system was already deterministic with 49149 transitions.
Interrupted random walk after 81554 steps, including 124 resets, run timeout after 30001 ms. (steps per millisecond=2 ) properties seen :{1=1, 2=1, 9=1, 10=1, 12=1, 17=1, 26=1, 27=1, 28=1, 29=1, 31=1, 32=1, 40=1, 42=1, 44=1, 50=1, 55=1, 58=1, 61=1, 67=1, 88=1}
Running SMT prover for 70 properties.
// Phase 1: matrix 49149 rows 32767 cols
[2021-05-20 18:57:26] [INFO ] Invariants computation overflowed in 33691 ms
[2021-05-20 18:57:57] [INFO ] SMT Verify possible in real domain returnedunsat :48 sat :0 real:22
[2021-05-20 18:58:44] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2021-05-20 18:59:37] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
Successfully simplified 49 atomic propositions for a total of 16 simplifications.
[2021-05-20 18:59:37] [INFO ] Initial state test concluded for 3 properties.
FORMULA ViralEpidemic-PT-S04D1C1A06-CTLCardinality-11 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA ViralEpidemic-PT-S04D1C1A06-CTLCardinality-14 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA ViralEpidemic-PT-S04D1C1A06-CTLCardinality-15 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Reduce places removed 1 places and 1 transitions.
Applied a total of 0 rules in 3410 ms. Remains 32766 /32767 variables (removed 1) and now considering 49148/49149 (removed 1) transitions.
[2021-05-20 18:59:44] [INFO ] Flatten gal took : 1320 ms
[2021-05-20 18:59:46] [INFO ] Flatten gal took : 1735 ms
[2021-05-20 18:59:48] [INFO ] Input system was already deterministic with 49148 transitions.
[2021-05-20 18:59:51] [INFO ] Flatten gal took : 1797 ms
[2021-05-20 18:59:53] [INFO ] Flatten gal took : 2069 ms
[2021-05-20 18:59:53] [INFO ] Time to serialize gal into /tmp/CTLCardinality5435587335972453176.gal : 507 ms
[2021-05-20 18:59:53] [INFO ] Time to serialize properties into /tmp/CTLCardinality14467017526193301735.ctl : 3 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality5435587335972453176.gal, -t, CGAL, -ctl, /tmp/CTLCardinality14467017526193301735.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]
its-ctl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality5435587335972453176.gal -t CGAL -ctl /tmp/CTLCardinality14467017526193301735.ctl --gen-order FOLLOW
Detected timeout of ITS tools.
[2021-05-20 19:00:25] [INFO ] Flatten gal took : 1712 ms
[2021-05-20 19:00:25] [INFO ] Applying decomposition
[2021-05-20 19:00:27] [INFO ] Flatten gal took : 1556 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph13582956508955957267.txt, -o, /tmp/graph13582956508955957267.bin, -w, /tmp/graph13582956508955957267.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph13582956508955957267.bin, -l, -1, -v, -w, /tmp/graph13582956508955957267.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-20 19:00:31] [INFO ] Decomposing Gal with order
[2021-05-20 19:00:49] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-20 19:11:00] [INFO ] Removed a total of 54888 redundant transitions.
[2021-05-20 19:11:01] [INFO ] Flatten gal took : 3671 ms
[2021-05-20 19:11:34] [INFO ] Fuse similar labels procedure discarded/fused a total of 116374 labels/synchronizations in 25629 ms.
[2021-05-20 19:11:39] [INFO ] Time to serialize gal into /tmp/CTLCardinality13112771006639281008.gal : 289 ms
[2021-05-20 19:11:39] [INFO ] Time to serialize properties into /tmp/CTLCardinality15550142624740708778.ctl : 6 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality13112771006639281008.gal, -t, CGAL, -ctl, /tmp/CTLCardinality15550142624740708778.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]
its-ctl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality13112771006639281008.gal -t CGAL -ctl /tmp/CTLCardinality15550142624740708778.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-20 19:12:11] [INFO ] Initial state reduction rules for CTL removed 1 formulas.
[2021-05-20 19:12:11] [INFO ] Flatten gal took : 2309 ms
[2021-05-20 19:12:11] [INFO ] Initial state reduction rules for CTL removed 1 formulas.
FORMULA ViralEpidemic-PT-S04D1C1A06-CTLCardinality-09 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA ViralEpidemic-PT-S04D1C1A06-CTLCardinality-02 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2021-05-20 19:12:13] [INFO ] Flatten gal took : 1914 ms
[2021-05-20 19:12:14] [INFO ] Applying decomposition
[2021-05-20 19:12:16] [INFO ] Flatten gal took : 1809 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph16465150401989106336.txt, -o, /tmp/graph16465150401989106336.bin, -w, /tmp/graph16465150401989106336.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph16465150401989106336.bin, -l, -1, -v, -w, /tmp/graph16465150401989106336.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-20 19:12:20] [INFO ] Decomposing Gal with order
[2021-05-20 19:12:39] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-20 19:21:57] [INFO ] Removed a total of 54897 redundant transitions.
[2021-05-20 19:21:58] [INFO ] Flatten gal took : 3120 ms
[2021-05-20 19:23:10] [INFO ] Fuse similar labels procedure discarded/fused a total of 119442 labels/synchronizations in 49399 ms.
[2021-05-20 19:23:18] [INFO ] Time to serialize gal into /tmp/CTLCardinality1325384467959174201.gal : 237 ms
[2021-05-20 19:23:18] [INFO ] Time to serialize properties into /tmp/CTLCardinality2846494300731000926.ctl : 2 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality1325384467959174201.gal, -t, CGAL, -ctl, /tmp/CTLCardinality2846494300731000926.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]
its-ctl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality1325384467959174201.gal -t CGAL -ctl /tmp/CTLCardinality2846494300731000926.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 11 CTL formulae.
Detected timeout of ITS tools.
[2021-05-20 19:49:09] [INFO ] Applying decomposition
[2021-05-20 19:49:11] [INFO ] Flatten gal took : 2323 ms
[2021-05-20 19:49:12] [INFO ] Decomposing Gal with order
[2021-05-20 19:49:53] [INFO ] Rewriting arrays to variables to allow decomposition.
BK_TIME_CONFINEMENT_REACHED
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution CTLCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLCardinality -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S04D1C1A06"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is ViralEpidemic-PT-S04D1C1A06, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r273-smll-162123880000297"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S04D1C1A06.tgz
mv ViralEpidemic-PT-S04D1C1A06 execution
cd execution
if [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "UpperBounds" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] || [ "CTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;