Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2021-input.r273-smll-162123880000296.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2021-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is ViralEpidemic-PT-S04D1C1A04, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r273-smll-162123880000296
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 2.7M
-rw-r--r-- 1 mcc users 17K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 107K May 10 09:44 CTLCardinality.xml
-rw-r--r-- 1 mcc users 15K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 102K May 10 09:44 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.0K Mar 28 16:48 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Mar 28 16:48 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K Mar 28 16:48 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Mar 28 16:48 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.3K Mar 27 15:10 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K Mar 27 15:10 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.9K Mar 26 06:15 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 14K Mar 26 06:15 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Mar 22 08:17 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K Mar 22 08:17 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 5 16:52 equiv_col
-rw-r--r-- 1 mcc users 11 May 5 16:52 instance
-rw-r--r-- 1 mcc users 6 May 5 16:52 iscolored
-rw-r--r-- 1 mcc users 2.4M May 5 16:52 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1621536529918

Running Version 0
[2021-05-20 18:48:53] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2021-05-20 18:48:53] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-20 18:48:53] [INFO ] Load time of PNML (sax parser for PT used): 571 ms
[2021-05-20 18:48:53] [INFO ] Transformed 2047 places.
[2021-05-20 18:48:53] [INFO ] Transformed 3069 transitions.
[2021-05-20 18:48:53] [INFO ] Found NUPN structural information;
[2021-05-20 18:48:53] [INFO ] Parsed PT model containing 2047 places and 3069 transitions in 715 ms.
Starting structural reductions, iteration 0 : 2047/2047 places, 3069/3069 transitions.
[2021-05-20 18:48:54] [INFO ] Redundant transitions in 327 ms returned []
// Phase 1: matrix 3069 rows 2047 cols
[2021-05-20 18:48:55] [INFO ] Computed 1 place invariants in 567 ms
[2021-05-20 18:48:56] [INFO ] SMT solver returned unknown. Retrying;
[2021-05-20 18:48:58] [INFO ] Dead Transitions using invariants and state equation in 4335 ms returned []
Finished structural reductions, in 1 iterations. Remains : 2047/2047 places, 3069/3069 transitions.
Final net has 2047 places and 3069 transitions.
[2021-05-20 18:48:59] [INFO ] Flatten gal took : 555 ms
[2021-05-20 18:48:59] [INFO ] Applying decomposition
[2021-05-20 18:49:00] [INFO ] Flatten gal took : 197 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph10272788722633306780.txt, -o, /tmp/graph10272788722633306780.bin, -w, /tmp/graph10272788722633306780.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph10272788722633306780.bin, -l, -1, -v, -w, /tmp/graph10272788722633306780.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-20 18:49:00] [INFO ] Decomposing Gal with order
[2021-05-20 18:49:00] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-20 18:49:01] [INFO ] Removed a total of 3428 redundant transitions.
[2021-05-20 18:49:01] [INFO ] Flatten gal took : 470 ms
[2021-05-20 18:49:02] [INFO ] Fuse similar labels procedure discarded/fused a total of 2940 labels/synchronizations in 275 ms.
[2021-05-20 18:49:02] [INFO ] Time to serialize gal into /tmp/StateSpace3038515060151123002.gal : 49 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/StateSpace3038515060151123002.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/StateSpace3038515060151123002.gal -t CGAL --stats
Detected timeout of ITS tools.
[2021-05-20 19:09:04] [INFO ] Applying decomposition
[2021-05-20 19:09:04] [INFO ] Flatten gal took : 157 ms
[2021-05-20 19:09:04] [INFO ] Decomposing Gal with order
[2021-05-20 19:09:05] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-20 19:09:05] [INFO ] Removed a total of 3410 redundant transitions.
[2021-05-20 19:09:05] [INFO ] Flatten gal took : 302 ms
[2021-05-20 19:09:05] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 13 ms.
[2021-05-20 19:09:05] [INFO ] Time to serialize gal into /tmp/StateSpace5298458438591741779.gal : 48 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/StateSpace5298458438591741779.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/StateSpace5298458438591741779.gal -t CGAL --stats
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst\_mod\_flat,9.04332e+319,282.322,3352784,1.66359e+06,28,7.43449e+06,5510,6500,3.87539e+06,34,3832,0
Total reachable state count : 9.04331765805127487650992468809626722242e+319

Max variable value : 1
STATE_SPACE MAX_TOKEN_IN_PLACE 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Maximum sum along a path : 1706
STATE_SPACE MAX_TOKEN_PER_MARKING 1706 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Exact state count : 90433176580512748828159409718764487883681574752917848759275377943099175550654383867224879113394209637104063115100453164656319134850372339293234801832388501737072571386503811294105335300802264129033907564479011059831066012742496460167194974259611943040640365740868051417695532732630697560111817146001981690666299140403216
STATE_SPACE STATES 90433176580512748828159409718764487883681574752917848759275377943099175550654383867224879113394209637104063115100453164656319134850372339293234801832388501737072571386503811294105335300802264129033907564479011059831066012742496460167194974259611943040640365740868051417695532732630697560111817146001981690666299140403216 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN

BK_STOP 1621538053858

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S04D1C1A04"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is ViralEpidemic-PT-S04D1C1A04, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r273-smll-162123880000296"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S04D1C1A04.tgz
mv ViralEpidemic-PT-S04D1C1A04 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;