Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fko/mcc2021-input.r159-oct2-162089267900152.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fko/mcc2021-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.......................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is PolyORBLF-COL-S04J06T06, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r159-oct2-162089267900152
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 524K
-rw-r--r-- 1 mcc users 17K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 109K May 10 09:43 CTLCardinality.xml
-rw-r--r-- 1 mcc users 12K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 90K May 10 09:43 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.1K Mar 28 16:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Mar 28 16:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K Mar 28 16:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K Mar 28 16:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.3K Mar 27 09:23 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Mar 27 09:23 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.9K Mar 25 11:58 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 16K Mar 25 11:58 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Mar 22 09:16 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K Mar 22 09:16 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 5 16:51 equiv_pt
-rw-r--r-- 1 mcc users 10 May 5 16:51 instance
-rw-r--r-- 1 mcc users 5 May 5 16:51 iscolored
-rw-r--r-- 1 mcc users 154K May 5 16:51 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1621187910494

Running Version 0
[2021-05-16 17:58:32] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2021-05-16 17:58:32] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-16 17:58:32] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
[2021-05-16 17:58:32] [WARNING] Using fallBack plugin, rng conformance not checked
[2021-05-16 17:58:33] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 566 ms
[2021-05-16 17:58:33] [INFO ] ms1 symmetric to ms2 in transition T_1124
[2021-05-16 17:58:33] [INFO ] ms1 symmetric to ms2 in transition T_1125
[2021-05-16 17:58:33] [INFO ] ms2 symmetric to ms3 in transition T_1125
[2021-05-16 17:58:33] [INFO ] ms1 symmetric to ms4 in transition T_1126
[2021-05-16 17:58:33] [INFO ] ms4 symmetric to ms2 in transition T_1126
[2021-05-16 17:58:33] [INFO ] ms2 symmetric to ms3 in transition T_1126
[2021-05-16 17:58:33] [INFO ] Imported 81 HL places and 65 HL transitions for a total of 618 PT places and 3232.0 transition bindings in 32 ms.
[2021-05-16 17:58:33] [INFO ] Unfolded HLPN to a Petri net with 618 places and 1564 transitions in 81 ms.
[2021-05-16 17:58:33] [INFO ] Unfolded HLPN properties in 0 ms.
Starting structural reductions, iteration 0 : 618/618 places, 1564/1564 transitions.
[2021-05-16 17:58:33] [INFO ] Flow matrix only has 1540 transitions (discarded 24 similar events)
// Phase 1: matrix 1540 rows 618 cols
[2021-05-16 17:58:33] [INFO ] Computed 54 place invariants in 104 ms
[2021-05-16 17:58:34] [INFO ] Dead Transitions using invariants and state equation in 1418 ms returned [772, 773, 774, 775, 776, 777, 784, 785, 786, 787, 788, 789, 802, 803, 804, 805, 806, 807, 826, 827, 828, 829, 830, 831, 832, 833, 834, 835, 836, 837, 838, 839, 840, 841, 842, 843, 844, 845, 846, 847, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 868, 869, 870, 871, 872, 873, 874, 875, 876, 877, 878, 879, 880, 881, 882, 883, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 894, 895, 896, 897, 904, 905, 906, 907, 908, 909, 922, 923, 924, 925, 926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 980, 981, 982, 983, 984, 985, 986, 987, 988, 989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1029, 1030, 1031, 1032, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1063, 1064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1088, 1089, 1090, 1091, 1092, 1093, 1094, 1095, 1096, 1097, 1098, 1099, 1100, 1101, 1102, 1103, 1104, 1105, 1106, 1107, 1108, 1109, 1110, 1111, 1112, 1113, 1114, 1115, 1116, 1117, 1118, 1119, 1120, 1121, 1122, 1123, 1124, 1125, 1126, 1127, 1128, 1129, 1130, 1131, 1132, 1133, 1134, 1135, 1136, 1137, 1138, 1139, 1140, 1141, 1142, 1143, 1144, 1145, 1146, 1147, 1148, 1149, 1150, 1151, 1152, 1153, 1154, 1155, 1156, 1157, 1158, 1159, 1160, 1161]
Found 324 dead transitions using SMT.
Drop transitions removed 324 transitions
Dead transitions reduction (with SMT) triggered by suspicious arc values removed 324 transitions :[1161, 1160, 1159, 1158, 1157, 1156, 1155, 1154, 1153, 1152, 1151, 1150, 1149, 1148, 1147, 1146, 1145, 1144, 1143, 1142, 1141, 1140, 1139, 1138, 1137, 1136, 1135, 1134, 1133, 1132, 1131, 1130, 1129, 1128, 1127, 1126, 1125, 1124, 1123, 1122, 1121, 1120, 1119, 1118, 1117, 1116, 1115, 1114, 1113, 1112, 1111, 1110, 1109, 1108, 1107, 1106, 1105, 1104, 1103, 1102, 1101, 1100, 1099, 1098, 1097, 1096, 1095, 1094, 1093, 1092, 1091, 1090, 1089, 1088, 1087, 1086, 1085, 1084, 1083, 1082, 1081, 1080, 1079, 1078, 1071, 1070, 1069, 1068, 1067, 1066, 1065, 1064, 1063, 1062, 1061, 1060, 1059, 1058, 1057, 1056, 1055, 1054, 1053, 1052, 1051, 1050, 1049, 1048, 1047, 1046, 1045, 1044, 1043, 1042, 1041, 1040, 1039, 1038, 1037, 1036, 1035, 1034, 1033, 1032, 1031, 1030, 1029, 1028, 1027, 1026, 1025, 1024, 1023, 1022, 1021, 1020, 1019, 1018, 1017, 1016, 1015, 1014, 1013, 1012, 1011, 1010, 1009, 1008, 1007, 1006, 1005, 1004, 1003, 1002, 1001, 1000, 999, 998, 997, 996, 995, 994, 993, 992, 991, 990, 989, 988, 987, 986, 985, 984, 983, 982, 981, 980, 979, 978, 977, 976, 975, 974, 973, 972, 971, 970, 969, 968, 967, 966, 965, 964, 963, 962, 961, 960, 959, 958, 957, 956, 955, 954, 953, 952, 951, 950, 949, 948, 947, 946, 945, 944, 943, 942, 941, 940, 939, 938, 937, 936, 935, 934, 933, 932, 931, 930, 929, 928, 927, 926, 925, 924, 923, 922, 909, 908, 907, 906, 905, 904, 897, 896, 895, 894, 893, 892, 891, 890, 889, 888, 887, 886, 885, 884, 883, 882, 881, 880, 879, 878, 877, 876, 875, 874, 873, 872, 871, 870, 869, 868, 861, 860, 859, 858, 857, 856, 855, 854, 853, 852, 851, 850, 849, 848, 847, 846, 845, 844, 843, 842, 841, 840, 839, 838, 837, 836, 835, 834, 833, 832, 831, 830, 829, 828, 827, 826, 807, 806, 805, 804, 803, 802, 789, 788, 787, 786, 785, 784, 777, 776, 775, 774, 773, 772]
[2021-05-16 17:58:34] [INFO ] Redundant transitions in 52 ms returned []
[2021-05-16 17:58:34] [INFO ] Flow matrix only has 1216 transitions (discarded 24 similar events)
// Phase 1: matrix 1216 rows 618 cols
[2021-05-16 17:58:34] [INFO ] Computed 54 place invariants in 65 ms
[2021-05-16 17:58:35] [INFO ] Dead Transitions using invariants and state equation in 516 ms returned []
Starting structural reductions, iteration 1 : 618/618 places, 1240/1564 transitions.
[2021-05-16 17:58:35] [INFO ] Redundant transitions in 12 ms returned []
[2021-05-16 17:58:35] [INFO ] Flow matrix only has 1216 transitions (discarded 24 similar events)
// Phase 1: matrix 1216 rows 618 cols
[2021-05-16 17:58:35] [INFO ] Computed 54 place invariants in 34 ms
[2021-05-16 17:58:35] [INFO ] Dead Transitions using invariants and state equation in 504 ms returned []
Finished structural reductions, in 2 iterations. Remains : 618/618 places, 1240/1564 transitions.
Final net has 618 places and 1240 transitions.
[2021-05-16 17:58:36] [INFO ] Flatten gal took : 269 ms
[2021-05-16 17:58:36] [INFO ] Applying decomposition
[2021-05-16 17:58:36] [INFO ] Flatten gal took : 119 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph16332262386894345143.txt, -o, /tmp/graph16332262386894345143.bin, -w, /tmp/graph16332262386894345143.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph16332262386894345143.bin, -l, -1, -v, -w, /tmp/graph16332262386894345143.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-16 17:58:36] [INFO ] Decomposing Gal with order
[2021-05-16 17:58:36] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-16 17:58:37] [INFO ] Removed a total of 1060 redundant transitions.
[2021-05-16 17:58:37] [INFO ] Flatten gal took : 308 ms
[2021-05-16 17:58:37] [INFO ] Fuse similar labels procedure discarded/fused a total of 122 labels/synchronizations in 33 ms.
[2021-05-16 17:58:37] [INFO ] Time to serialize gal into /tmp/StateSpace4678895342546081049.gal : 44 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/StateSpace4678895342546081049.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/StateSpace4678895342546081049.gal -t CGAL --stats
Detected timeout of ITS tools.
[2021-05-16 18:18:40] [INFO ] Applying decomposition
[2021-05-16 18:18:41] [INFO ] Flatten gal took : 366 ms
[2021-05-16 18:18:41] [INFO ] Decomposing Gal with order
[2021-05-16 18:18:41] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-16 18:18:41] [INFO ] Removed a total of 3751 redundant transitions.
[2021-05-16 18:18:41] [INFO ] Flatten gal took : 530 ms
[2021-05-16 18:18:41] [INFO ] Fuse similar labels procedure discarded/fused a total of 60 labels/synchronizations in 24 ms.
[2021-05-16 18:18:41] [INFO ] Time to serialize gal into /tmp/StateSpace3309492906810255491.gal : 14 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/StateSpace3309492906810255491.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/StateSpace3309492906810255491.gal -t CGAL --stats
Detected timeout of ITS tools.
[2021-05-16 18:38:45] [INFO ] Flatten gal took : 606 ms
[2021-05-16 18:38:46] [INFO ] Input system was already deterministic with 1240 transitions.
[2021-05-16 18:38:46] [INFO ] Transformed 618 places.
[2021-05-16 18:38:46] [INFO ] Transformed 1240 transitions.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit/bin//..//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit/bin//..//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2021-05-16 18:39:16] [INFO ] Time to serialize gal into /tmp/StateSpace4847798957254116904.gal : 14 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/StateSpace4847798957254116904.gal, -t, CGAL, --stats, --load-order, /home/mcc/execution/model.ord, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/StateSpace4847798957254116904.gal -t CGAL --stats --load-order /home/mcc/execution/model.ord --gen-order FOLLOW
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBLF-COL-S04J06T06"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is PolyORBLF-COL-S04J06T06, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r159-oct2-162089267900152"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBLF-COL-S04J06T06.tgz
mv PolyORBLF-COL-S04J06T06 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;