Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2021-input.r121-tall-162075407400762.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2021-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is MAPK-PT-02560, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r121-tall-162075407400762
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 436K
-rw-r--r-- 1 mcc users 16K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 132K May 10 09:43 CTLCardinality.xml
-rw-r--r-- 1 mcc users 9.8K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 97K May 10 09:43 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.2K May 6 14:48 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.1K Mar 28 16:20 LTLCardinality.txt
-rw-r--r-- 1 mcc users 22K Mar 28 16:20 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K Mar 28 16:20 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Mar 28 16:20 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K Mar 27 06:05 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 21K Mar 27 06:05 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.9K Mar 25 07:16 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 21K Mar 25 07:16 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Mar 22 09:15 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K Mar 22 09:15 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 5 16:51 equiv_col
-rw-r--r-- 1 mcc users 6 May 5 16:51 instance
-rw-r--r-- 1 mcc users 6 May 5 16:51 iscolored
-rw-r--r-- 1 mcc users 25K May 5 16:51 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPK-PT-02560-CTLFireability-00
FORMULA_NAME MAPK-PT-02560-CTLFireability-01
FORMULA_NAME MAPK-PT-02560-CTLFireability-02
FORMULA_NAME MAPK-PT-02560-CTLFireability-03
FORMULA_NAME MAPK-PT-02560-CTLFireability-04
FORMULA_NAME MAPK-PT-02560-CTLFireability-05
FORMULA_NAME MAPK-PT-02560-CTLFireability-06
FORMULA_NAME MAPK-PT-02560-CTLFireability-07
FORMULA_NAME MAPK-PT-02560-CTLFireability-08
FORMULA_NAME MAPK-PT-02560-CTLFireability-09
FORMULA_NAME MAPK-PT-02560-CTLFireability-10
FORMULA_NAME MAPK-PT-02560-CTLFireability-11
FORMULA_NAME MAPK-PT-02560-CTLFireability-12
FORMULA_NAME MAPK-PT-02560-CTLFireability-13
FORMULA_NAME MAPK-PT-02560-CTLFireability-14
FORMULA_NAME MAPK-PT-02560-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1620898026147

Running Version 0
[2021-05-13 09:27:08] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2021-05-13 09:27:08] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-13 09:27:08] [INFO ] Load time of PNML (sax parser for PT used): 26 ms
[2021-05-13 09:27:08] [INFO ] Transformed 22 places.
[2021-05-13 09:27:08] [INFO ] Transformed 30 transitions.
[2021-05-13 09:27:08] [INFO ] Parsed PT model containing 22 places and 30 transitions in 61 ms.
Parsed 16 properties from file /home/mcc/execution/CTLFireability.xml in 15 ms.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 3 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 3 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 1 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
[2021-05-13 09:27:08] [INFO ] Reduced 2 identical enabling conditions.
Support contains 22 out of 22 places. Attempting structural reductions.
Starting structural reductions, iteration 0 : 22/22 places, 30/30 transitions.
Applied a total of 0 rules in 8 ms. Remains 22 /22 variables (removed 0) and now considering 30/30 (removed 0) transitions.
// Phase 1: matrix 30 rows 22 cols
[2021-05-13 09:27:08] [INFO ] Computed 7 place invariants in 5 ms
[2021-05-13 09:27:08] [INFO ] Implicit Places using invariants in 71 ms returned []
// Phase 1: matrix 30 rows 22 cols
[2021-05-13 09:27:08] [INFO ] Computed 7 place invariants in 6 ms
[2021-05-13 09:27:08] [INFO ] Implicit Places using invariants and state equation in 38 ms returned []
Implicit Place search using SMT with State Equation took 134 ms to find 0 implicit places.
// Phase 1: matrix 30 rows 22 cols
[2021-05-13 09:27:08] [INFO ] Computed 7 place invariants in 1 ms
[2021-05-13 09:27:08] [INFO ] Dead Transitions using invariants and state equation in 51 ms returned []
Finished structural reductions, in 1 iterations. Remains : 22/22 places, 30/30 transitions.
[2021-05-13 09:27:08] [INFO ] Initial state reduction rules for CTL removed 2 formulas.
[2021-05-13 09:27:08] [INFO ] Flatten gal took : 24 ms
FORMULA MAPK-PT-02560-CTLFireability-14 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPK-PT-02560-CTLFireability-09 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2021-05-13 09:27:08] [INFO ] Flatten gal took : 9 ms
[2021-05-13 09:27:08] [INFO ] Input system was already deterministic with 30 transitions.
Incomplete random walk after 100003 steps, including 2 resets, run finished after 62 ms. (steps per millisecond=1612 ) properties (out of 82) seen :75
Running SMT prover for 7 properties.
// Phase 1: matrix 30 rows 22 cols
[2021-05-13 09:27:08] [INFO ] Computed 7 place invariants in 1 ms
[2021-05-13 09:27:08] [INFO ] [Real]Absence check using 7 positive place invariants in 2 ms returned unsat
[2021-05-13 09:27:08] [INFO ] [Real]Absence check using 7 positive place invariants in 2 ms returned sat
[2021-05-13 09:27:08] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:08] [INFO ] [Real]Absence check using state equation in 13 ms returned sat
[2021-05-13 09:27:08] [INFO ] Computed and/alt/rep : 27/54/27 causal constraints (skipped 2 transitions) in 3 ms.
[2021-05-13 09:27:08] [INFO ] Solution in real domain found non-integer solution.
[2021-05-13 09:27:08] [INFO ] [Nat]Absence check using 7 positive place invariants in 2 ms returned sat
[2021-05-13 09:27:08] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:08] [INFO ] [Nat]Absence check using state equation in 7 ms returned sat
[2021-05-13 09:27:08] [INFO ] Computed and/alt/rep : 27/54/27 causal constraints (skipped 2 transitions) in 2 ms.
[2021-05-13 09:27:08] [INFO ] Added : 15 causal constraints over 3 iterations in 25 ms. Result :sat
[2021-05-13 09:27:08] [INFO ] [Real]Absence check using 7 positive place invariants in 2 ms returned sat
[2021-05-13 09:27:08] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:08] [INFO ] [Real]Absence check using state equation in 9 ms returned sat
[2021-05-13 09:27:08] [INFO ] Solution in real domain found non-integer solution.
[2021-05-13 09:27:08] [INFO ] [Nat]Absence check using 7 positive place invariants in 2 ms returned sat
[2021-05-13 09:27:08] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:08] [INFO ] [Nat]Absence check using state equation in 12 ms returned sat
[2021-05-13 09:27:08] [INFO ] Computed and/alt/rep : 27/54/27 causal constraints (skipped 2 transitions) in 4 ms.
[2021-05-13 09:27:08] [INFO ] Added : 16 causal constraints over 4 iterations in 23 ms. Result :sat
[2021-05-13 09:27:08] [INFO ] [Real]Absence check using 7 positive place invariants in 1 ms returned unsat
[2021-05-13 09:27:08] [INFO ] [Real]Absence check using 7 positive place invariants in 1 ms returned sat
[2021-05-13 09:27:08] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:08] [INFO ] [Real]Absence check using state equation in 8 ms returned sat
[2021-05-13 09:27:09] [INFO ] Computed and/alt/rep : 27/54/27 causal constraints (skipped 2 transitions) in 4 ms.
[2021-05-13 09:27:09] [INFO ] Solution in real domain found non-integer solution.
[2021-05-13 09:27:09] [INFO ] [Nat]Absence check using 7 positive place invariants in 1 ms returned sat
[2021-05-13 09:27:09] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:09] [INFO ] [Nat]Absence check using state equation in 9 ms returned sat
[2021-05-13 09:27:09] [INFO ] Computed and/alt/rep : 27/54/27 causal constraints (skipped 2 transitions) in 4 ms.
[2021-05-13 09:27:09] [INFO ] Added : 17 causal constraints over 5 iterations in 20 ms. Result :sat
[2021-05-13 09:27:09] [INFO ] [Real]Absence check using 7 positive place invariants in 2 ms returned sat
[2021-05-13 09:27:09] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:09] [INFO ] [Real]Absence check using state equation in 8 ms returned sat
[2021-05-13 09:27:09] [INFO ] Solution in real domain found non-integer solution.
[2021-05-13 09:27:09] [INFO ] [Nat]Absence check using 7 positive place invariants in 2 ms returned sat
[2021-05-13 09:27:09] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:09] [INFO ] [Nat]Absence check using state equation in 12 ms returned sat
[2021-05-13 09:27:09] [INFO ] Computed and/alt/rep : 27/54/27 causal constraints (skipped 2 transitions) in 5 ms.
[2021-05-13 09:27:09] [INFO ] Added : 15 causal constraints over 3 iterations in 17 ms. Result :sat
[2021-05-13 09:27:09] [INFO ] [Real]Absence check using 7 positive place invariants in 1 ms returned sat
[2021-05-13 09:27:09] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:09] [INFO ] [Real]Absence check using state equation in 7 ms returned sat
[2021-05-13 09:27:09] [INFO ] Computed and/alt/rep : 27/54/27 causal constraints (skipped 2 transitions) in 2 ms.
[2021-05-13 09:27:09] [INFO ] Solution in real domain found non-integer solution.
[2021-05-13 09:27:09] [INFO ] [Nat]Absence check using 7 positive place invariants in 1 ms returned sat
[2021-05-13 09:27:09] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2021-05-13 09:27:09] [INFO ] [Nat]Absence check using state equation in 7 ms returned sat
[2021-05-13 09:27:09] [INFO ] Computed and/alt/rep : 27/54/27 causal constraints (skipped 2 transitions) in 2 ms.
[2021-05-13 09:27:09] [INFO ] Added : 15 causal constraints over 3 iterations in 13 ms. Result :sat
Successfully simplified 2 atomic propositions for a total of 14 simplifications.
Partial Post-agglomeration rule applied 2 times.
Drop transitions removed 2 transitions
Iterating global reduction 0 with 2 rules applied. Total rules applied 2 place count 22 transition count 30
Discarding 1 places :
Symmetric choice reduction at 0 with 1 rule applications. Total rules 3 place count 21 transition count 29
Iterating global reduction 0 with 1 rules applied. Total rules applied 4 place count 21 transition count 29
Applied a total of 4 rules in 9 ms. Remains 21 /22 variables (removed 1) and now considering 29/30 (removed 1) transitions.
[2021-05-13 09:27:09] [INFO ] Flatten gal took : 3 ms
[2021-05-13 09:27:09] [INFO ] Flatten gal took : 3 ms
[2021-05-13 09:27:09] [INFO ] Input system was already deterministic with 29 transitions.
[2021-05-13 09:27:09] [INFO ] Flatten gal took : 3 ms
[2021-05-13 09:27:09] [INFO ] Flatten gal took : 3 ms
[2021-05-13 09:27:09] [INFO ] Time to serialize gal into /tmp/CTLFireability5669322289304814346.gal : 1 ms
[2021-05-13 09:27:09] [INFO ] Time to serialize properties into /tmp/CTLFireability10948415544665702881.ctl : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLFireability5669322289304814346.gal, -t, CGAL, -ctl, /tmp/CTLFireability10948415544665702881.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLFireability5669322289304814346.gal -t CGAL -ctl /tmp/CTLFireability10948415544665702881.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-13 09:27:39] [INFO ] Flatten gal took : 3 ms
[2021-05-13 09:27:39] [INFO ] Applying decomposition
[2021-05-13 09:27:39] [INFO ] Flatten gal took : 2 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph1128993748106721114.txt, -o, /tmp/graph1128993748106721114.bin, -w, /tmp/graph1128993748106721114.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph1128993748106721114.bin, -l, -1, -v, -w, /tmp/graph1128993748106721114.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-13 09:27:39] [INFO ] Decomposing Gal with order
[2021-05-13 09:27:39] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-13 09:27:39] [INFO ] Removed a total of 5 redundant transitions.
[2021-05-13 09:27:39] [INFO ] Flatten gal took : 49 ms
[2021-05-13 09:27:39] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 1 ms.
[2021-05-13 09:27:39] [INFO ] Time to serialize gal into /tmp/CTLFireability4399034253326703019.gal : 6 ms
[2021-05-13 09:27:39] [INFO ] Time to serialize properties into /tmp/CTLFireability15338292502199554800.ctl : 12 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLFireability4399034253326703019.gal, -t, CGAL, -ctl, /tmp/CTLFireability15338292502199554800.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLFireability4399034253326703019.gal -t CGAL -ctl /tmp/CTLFireability15338292502199554800.ctl
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
Applied a total of 0 rules in 1 ms. Remains 22 /22 variables (removed 0) and now considering 30/30 (removed 0) transitions.
[2021-05-13 09:28:09] [INFO ] Flatten gal took : 2 ms
[2021-05-13 09:28:09] [INFO ] Flatten gal took : 2 ms
[2021-05-13 09:28:09] [INFO ] Input system was already deterministic with 30 transitions.
[2021-05-13 09:28:09] [INFO ] Flatten gal took : 2 ms
[2021-05-13 09:28:09] [INFO ] Flatten gal took : 2 ms
[2021-05-13 09:28:09] [INFO ] Time to serialize gal into /tmp/CTLFireability11828452808665122439.gal : 0 ms
[2021-05-13 09:28:09] [INFO ] Time to serialize properties into /tmp/CTLFireability17570203653980299497.ctl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLFireability11828452808665122439.gal, -t, CGAL, -ctl, /tmp/CTLFireability17570203653980299497.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLFireability11828452808665122439.gal -t CGAL -ctl /tmp/CTLFireability17570203653980299497.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-13 09:28:39] [INFO ] Flatten gal took : 7 ms
[2021-05-13 09:28:39] [INFO ] Applying decomposition
[2021-05-13 09:28:39] [INFO ] Flatten gal took : 3 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph4204579733043696381.txt, -o, /tmp/graph4204579733043696381.bin, -w, /tmp/graph4204579733043696381.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph4204579733043696381.bin, -l, -1, -v, -w, /tmp/graph4204579733043696381.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-13 09:28:39] [INFO ] Decomposing Gal with order
[2021-05-13 09:28:39] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-13 09:28:39] [INFO ] Removed a total of 7 redundant transitions.
[2021-05-13 09:28:39] [INFO ] Flatten gal took : 4 ms
[2021-05-13 09:28:39] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 2 ms.
[2021-05-13 09:28:39] [INFO ] Time to serialize gal into /tmp/CTLFireability155283548820741498.gal : 3 ms
[2021-05-13 09:28:39] [INFO ] Time to serialize properties into /tmp/CTLFireability6501014057522507918.ctl : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLFireability155283548820741498.gal, -t, CGAL, -ctl, /tmp/CTLFireability6501014057522507918.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLFireability155283548820741498.gal -t CGAL -ctl /tmp/CTLFireability6501014057522507918.ctl
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 0 place count 22 transition count 29
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 3 place count 20 transition count 29
Performed 6 Post agglomeration using F-continuation condition.Transition count delta: 6
Deduced a syphon composed of 6 places in 0 ms
Reduce places removed 8 places and 0 transitions.
Iterating global reduction 0 with 14 rules applied. Total rules applied 17 place count 12 transition count 23
Graph (trivial) has 8 edges and 12 vertex of which 2 / 12 are part of one of the 1 SCC in 7 ms
Free SCC test removed 1 places
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 0 with 2 rules applied. Total rules applied 19 place count 10 transition count 23
Ensure Unique test removed 4 transitions
Reduce isomorphic transitions removed 4 transitions.
Graph (trivial) has 7 edges and 10 vertex of which 3 / 10 are part of one of the 1 SCC in 0 ms
Free SCC test removed 2 places
Iterating post reduction 0 with 5 rules applied. Total rules applied 24 place count 8 transition count 19
Ensure Unique test removed 6 transitions
Reduce isomorphic transitions removed 6 transitions.
Iterating post reduction 1 with 6 rules applied. Total rules applied 30 place count 8 transition count 13
Drop transitions removed 2 transitions
Redundant transition composition rules discarded 2 transitions
Iterating global reduction 2 with 2 rules applied. Total rules applied 32 place count 8 transition count 11
Partial Post-agglomeration rule applied 1 times.
Drop transitions removed 1 transitions
Iterating global reduction 2 with 1 rules applied. Total rules applied 33 place count 8 transition count 11
Drop transitions removed 1 transitions
Redundant transition composition rules discarded 1 transitions
Iterating global reduction 2 with 1 rules applied. Total rules applied 34 place count 8 transition count 10
Applied a total of 34 rules in 14 ms. Remains 8 /22 variables (removed 14) and now considering 10/30 (removed 20) transitions.
[2021-05-13 09:29:09] [INFO ] Flatten gal took : 1 ms
[2021-05-13 09:29:09] [INFO ] Flatten gal took : 0 ms
[2021-05-13 09:29:09] [INFO ] Input system was already deterministic with 10 transitions.
[2021-05-13 09:29:09] [INFO ] Flatten gal took : 1 ms
[2021-05-13 09:29:09] [INFO ] Flatten gal took : 1 ms
[2021-05-13 09:29:09] [INFO ] Time to serialize gal into /tmp/CTLFireability11808015639955829369.gal : 0 ms
[2021-05-13 09:29:09] [INFO ] Time to serialize properties into /tmp/CTLFireability4242373429506872747.ctl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLFireability11808015639955829369.gal, -t, CGAL, -ctl, /tmp/CTLFireability4242373429506872747.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLFireability11808015639955829369.gal -t CGAL -ctl /tmp/CTLFireability4242373429506872747.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-13 09:29:39] [INFO ] Flatten gal took : 2 ms
[2021-05-13 09:29:39] [INFO ] Applying decomposition
[2021-05-13 09:29:39] [INFO ] Flatten gal took : 1 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph7134811252684118663.txt, -o, /tmp/graph7134811252684118663.bin, -w, /tmp/graph7134811252684118663.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph7134811252684118663.bin, -l, -1, -v, -w, /tmp/graph7134811252684118663.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-13 09:29:39] [INFO ] Decomposing Gal with order
[2021-05-13 09:29:39] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-13 09:29:39] [INFO ] Removed a total of 1 redundant transitions.
[2021-05-13 09:29:39] [INFO ] Flatten gal took : 1 ms
[2021-05-13 09:29:39] [INFO ] Fuse similar labels procedure discarded/fused a total of 2 labels/synchronizations in 0 ms.
[2021-05-13 09:29:39] [INFO ] Time to serialize gal into /tmp/CTLFireability11519062558143819723.gal : 0 ms
[2021-05-13 09:29:39] [INFO ] Time to serialize properties into /tmp/CTLFireability15742957017734126833.ctl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLFireability11519062558143819723.gal, -t, CGAL, -ctl, /tmp/CTLFireability15742957017734126833.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLFireability11519062558143819723.gal -t CGAL -ctl /tmp/CTLFireability15742957017734126833.ctl
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-13 09:30:10] [INFO ] Flatten gal took : 5 ms
[2021-05-13 09:30:10] [INFO ] Flatten gal took : 5 ms
[2021-05-13 09:30:10] [INFO ] Applying decomposition
[2021-05-13 09:30:10] [INFO ] Flatten gal took : 5 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph5276704799072106612.txt, -o, /tmp/graph5276704799072106612.bin, -w, /tmp/graph5276704799072106612.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph5276704799072106612.bin, -l, -1, -v, -w, /tmp/graph5276704799072106612.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-13 09:30:10] [INFO ] Decomposing Gal with order
[2021-05-13 09:30:10] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-13 09:30:10] [INFO ] Removed a total of 7 redundant transitions.
[2021-05-13 09:30:10] [INFO ] Flatten gal took : 7 ms
[2021-05-13 09:30:10] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 0 ms.
[2021-05-13 09:30:10] [INFO ] Time to serialize gal into /tmp/CTLFireability6942203721026674329.gal : 1 ms
[2021-05-13 09:30:10] [INFO ] Time to serialize properties into /tmp/CTLFireability18127190739876981092.ctl : 7 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLFireability6942203721026674329.gal, -t, CGAL, -ctl, /tmp/CTLFireability18127190739876981092.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLFireability6942203721026674329.gal -t CGAL -ctl /tmp/CTLFireability18127190739876981092.ctl
No direction supplied, using forward translation only.
Parsed 14 CTL formulae.
Detected timeout of ITS tools.
[2021-05-13 09:51:10] [INFO ] Flatten gal took : 13 ms
[2021-05-13 09:51:10] [INFO ] Time to serialize gal into /tmp/CTLFireability8832915106567021054.gal : 3 ms
[2021-05-13 09:51:10] [INFO ] Time to serialize properties into /tmp/CTLFireability13460931083420710742.ctl : 10 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLFireability8832915106567021054.gal, -t, CGAL, -ctl, /tmp/CTLFireability13460931083420710742.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLFireability8832915106567021054.gal -t CGAL -ctl /tmp/CTLFireability13460931083420710742.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 14 CTL formulae.
Detected timeout of ITS tools.
[2021-05-13 10:12:10] [INFO ] Flatten gal took : 4 ms
[2021-05-13 10:12:10] [INFO ] Input system was already deterministic with 30 transitions.
[2021-05-13 10:12:10] [INFO ] Transformed 22 places.
[2021-05-13 10:12:10] [INFO ] Transformed 30 transitions.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit/bin//..//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit/bin//..//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2021-05-13 10:12:11] [INFO ] Time to serialize gal into /tmp/CTLFireability2235901548069843277.gal : 5 ms
[2021-05-13 10:12:11] [INFO ] Time to serialize properties into /tmp/CTLFireability10998270163100084940.ctl : 3 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLFireability2235901548069843277.gal, -t, CGAL, -ctl, /tmp/CTLFireability10998270163100084940.ctl, --load-order, /home/mcc/execution/model.ord, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLFireability2235901548069843277.gal -t CGAL -ctl /tmp/CTLFireability10998270163100084940.ctl --load-order /home/mcc/execution/model.ord --gen-order FOLLOW
Successfully loaded order from file /home/mcc/execution/model.ord
No direction supplied, using forward translation only.
Parsed 14 CTL formulae.

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPK-PT-02560"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is MAPK-PT-02560, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r121-tall-162075407400762"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPK-PT-02560.tgz
mv MAPK-PT-02560 execution
cd execution
if [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "UpperBounds" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] || [ "CTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;