About the Execution of ITS-Tools for Echo-PT-d02r19
| Execution Summary | |||||
| Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
| 2589.176 | 136791.00 | 143293.00 | 22455.60 | FTFFFFFFFFTFFTFT | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/data/fkordon/mcc2021-input.r083-tall-162048875600630.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2021-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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Generated by BenchKit 2-4028
Executing tool itstools
Input is Echo-PT-d02r19, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r083-tall-162048875600630
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 1.9M
-rw-r--r-- 1 mcc users 11K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 93K May 5 16:58 CTLCardinality.xml
-rw-r--r-- 1 mcc users 11K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 91K May 5 16:58 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 6 14:48 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.1K Mar 28 16:07 LTLCardinality.txt
-rw-r--r-- 1 mcc users 20K Mar 28 16:07 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K Mar 28 16:07 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K Mar 28 16:07 LTLFireability.xml
-rw-r--r-- 1 mcc users 2.8K Mar 23 10:41 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 12K Mar 23 10:41 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.5K Mar 22 18:43 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K Mar 22 18:43 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Mar 22 09:11 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K Mar 22 09:11 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 5 16:51 equiv_col
-rw-r--r-- 1 mcc users 7 May 5 16:51 instance
-rw-r--r-- 1 mcc users 6 May 5 16:51 iscolored
-rw-r--r-- 1 mcc users 1.5M May 5 16:51 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-00
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-01
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-02
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-03
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-04
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-05
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-06
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-07
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-08
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-09
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-10
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-11
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-12
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-13
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-14
FORMULA_NAME Echo-PT-d02r19-ReachabilityCardinality-15
=== Now, execution of the tool begins
BK_START 1620641977081
Running Version 0
[2021-05-10 10:19:42] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2021-05-10 10:19:42] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-10 10:19:42] [INFO ] Load time of PNML (sax parser for PT used): 200 ms
[2021-05-10 10:19:42] [INFO ] Transformed 3455 places.
[2021-05-10 10:19:42] [INFO ] Transformed 2730 transitions.
[2021-05-10 10:19:42] [INFO ] Found NUPN structural information;
[2021-05-10 10:19:42] [INFO ] Parsed PT model containing 3455 places and 2730 transitions in 269 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityCardinality.xml in 9 ms.
Working with output stream class java.io.PrintStream
FORMULA Echo-PT-d02r19-ReachabilityCardinality-00 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Echo-PT-d02r19-ReachabilityCardinality-02 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Echo-PT-d02r19-ReachabilityCardinality-04 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Echo-PT-d02r19-ReachabilityCardinality-07 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Echo-PT-d02r19-ReachabilityCardinality-12 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Echo-PT-d02r19-ReachabilityCardinality-14 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Incomplete random walk after 10000 steps, including 13 resets, run finished after 312 ms. (steps per millisecond=32 ) properties (out of 10) seen :9
FORMULA Echo-PT-d02r19-ReachabilityCardinality-15 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Echo-PT-d02r19-ReachabilityCardinality-11 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Echo-PT-d02r19-ReachabilityCardinality-10 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Echo-PT-d02r19-ReachabilityCardinality-09 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Echo-PT-d02r19-ReachabilityCardinality-08 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Echo-PT-d02r19-ReachabilityCardinality-06 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Echo-PT-d02r19-ReachabilityCardinality-05 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Echo-PT-d02r19-ReachabilityCardinality-03 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Echo-PT-d02r19-ReachabilityCardinality-01 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 107 ms. (steps per millisecond=93 ) properties (out of 1) seen :0
Running SMT prover for 1 properties.
// Phase 1: matrix 2730 rows 3455 cols
[2021-05-10 10:19:43] [INFO ] Computed 1729 place invariants in 327 ms
[2021-05-10 10:19:44] [INFO ] [Real]Absence check using 233 positive place invariants in 116 ms returned sat
[2021-05-10 10:19:44] [INFO ] [Real]Absence check using 233 positive and 1496 generalized place invariants in 561 ms returned sat
[2021-05-10 10:19:44] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-10 10:19:48] [INFO ] [Real]Absence check using state equation in 3415 ms returned sat
[2021-05-10 10:19:57] [INFO ] Deduced a trap composed of 5 places in 4071 ms of which 14 ms to minimize.
[2021-05-10 10:19:57] [WARNING] SMT solver failed with error :java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Failed to assert expression: java.io.IOException: Stream close... while checking expression at index 0
Support contains 5 out of 3455 places. Attempting structural reductions.
Starting structural reductions, iteration 0 : 3455/3455 places, 2730/2730 transitions.
Graph (complete) has 12066 edges and 3455 vertex of which 3085 are kept as prefixes of interest. Removing 370 places using SCC suffix rule.23 ms
Discarding 370 places :
Also discarding 1 output transitions
Drop transitions removed 1 transitions
Drop transitions removed 4 transitions
Reduce isomorphic transitions removed 4 transitions.
Iterating post reduction 0 with 4 rules applied. Total rules applied 5 place count 3085 transition count 2725
Reduce places removed 1 places and 1 transitions.
Iterating global reduction 1 with 1 rules applied. Total rules applied 6 place count 3084 transition count 2724
Applied a total of 6 rules in 659 ms. Remains 3084 /3455 variables (removed 371) and now considering 2724/2730 (removed 6) transitions.
Finished structural reductions, in 1 iterations. Remains : 3084/3455 places, 2724/2730 transitions.
[2021-05-10 10:19:59] [INFO ] Flatten gal took : 327 ms
[2021-05-10 10:19:59] [INFO ] Flatten gal took : 178 ms
[2021-05-10 10:20:06] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality3674399717296628604.gal : 77 ms
[2021-05-10 10:20:06] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality7353606854436573843.prop : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality3674399717296628604.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality7353606854436573843.prop, --nowitness, --gen-order, FOLLOW], workingDir=/home/mcc/execution]
its-reach command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality3674399717296628604.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality7353606854436573843.prop --nowitness --gen-order FOLLOW
Loading property file /tmp/ReachabilityCardinality7353606854436573843.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 3
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :3 after 6
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :6 after 16
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :16 after 41
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :41 after 144
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :144 after 461
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :461 after 3297
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :3297 after 11544
Detected timeout of ITS tools.
[2021-05-10 10:20:21] [INFO ] Flatten gal took : 165 ms
[2021-05-10 10:20:21] [INFO ] Applying decomposition
[2021-05-10 10:20:22] [INFO ] Flatten gal took : 195 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph2053104313496405610.txt, -o, /tmp/graph2053104313496405610.bin, -w, /tmp/graph2053104313496405610.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph2053104313496405610.bin, -l, -1, -v, -w, /tmp/graph2053104313496405610.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-10 10:20:22] [INFO ] Decomposing Gal with order
[2021-05-10 10:20:22] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-10 10:20:23] [INFO ] Removed a total of 3466 redundant transitions.
[2021-05-10 10:20:23] [INFO ] Flatten gal took : 428 ms
[2021-05-10 10:20:23] [INFO ] Fuse similar labels procedure discarded/fused a total of 173 labels/synchronizations in 123 ms.
[2021-05-10 10:20:23] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality10420015639917349361.gal : 32 ms
[2021-05-10 10:20:23] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality11164204129533839680.prop : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality10420015639917349361.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality11164204129533839680.prop, --nowitness], workingDir=/home/mcc/execution]
its-reach command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality10420015639917349361.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality11164204129533839680.prop --nowitness
Loading property file /tmp/ReachabilityCardinality11164204129533839680.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 1
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :1 after 1
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :1 after 1
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :1 after 1
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :1 after 1
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :1 after 1
Detected timeout of ITS tools.
Built C files in :
/tmp/ltsmin11755288474172983121
[2021-05-10 10:20:38] [INFO ] Built C files in 56ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin11755288474172983121
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin11755288474172983121]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin11755288474172983121] killed by timeout after 1 SECONDS
java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin11755288474172983121] killed by timeout after 1 SECONDS
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:79)
at java.base/java.lang.Thread.run(Thread.java:834)
Incomplete random walk after 1000000 steps, including 1393 resets, run finished after 23040 ms. (steps per millisecond=43 ) properties (out of 1) seen :0
Interrupted Best-First random walk after 409307 steps, including 9 resets, run timeout after 5001 ms. (steps per millisecond=81 ) properties seen :{}
Interrupted probabilistic random walk after 3213107 steps, run timeout after 30001 ms. (steps per millisecond=107 ) properties seen :{}
Probabilistic random walk after 3213107 steps, saw 496479 distinct states, run finished after 30001 ms. (steps per millisecond=107 ) properties seen :{}
Running SMT prover for 1 properties.
// Phase 1: matrix 2724 rows 3084 cols
[2021-05-10 10:21:41] [INFO ] Invariants computation overflowed in 3417 ms
[2021-05-10 10:21:42] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-10 10:21:43] [INFO ] [Real]Absence check using state equation in 1569 ms returned sat
[2021-05-10 10:21:52] [INFO ] Solution in real domain found non-integer solution.
FORMULA Echo-PT-d02r19-ReachabilityCardinality-13 TRUE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
Fused 1 Parikh solutions to 0 different solutions.
All properties solved without resorting to model-checking.
BK_STOP 1620642113872
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityCardinality -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Echo-PT-d02r19"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is Echo-PT-d02r19, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r083-tall-162048875600630"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/Echo-PT-d02r19.tgz
mv Echo-PT-d02r19 execution
cd execution
if [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "UpperBounds" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] || [ "ReachabilityCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;