Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2021-input.r299-tall-162124165100333.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2021-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is LeafsetExtension-PT-S32C3, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r299-tall-162124165100333
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 8.9M
-rw-r--r-- 1 mcc users 52K May 15 08:57 CTLCardinality.txt
-rw-r--r-- 1 mcc users 191K May 15 08:57 CTLCardinality.xml
-rw-r--r-- 1 mcc users 42K May 15 08:57 CTLFireability.txt
-rw-r--r-- 1 mcc users 140K May 15 08:57 CTLFireability.xml
-rw-r--r-- 1 mcc users 5.5K May 12 07:58 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K May 12 07:58 LTLCardinality.xml
-rw-r--r-- 1 mcc users 4.2K May 12 07:58 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 12 07:58 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 12 08:13 NewModel
-rw-r--r-- 1 mcc users 4.7K May 11 18:44 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K May 11 18:44 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 4.6K May 11 15:50 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K May 11 15:50 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K May 12 04:40 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 12 04:40 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 12 08:13 equiv_col
-rw-r--r-- 1 mcc users 6 May 12 08:13 instance
-rw-r--r-- 1 mcc users 6 May 12 08:13 iscolored
-rw-r--r-- 1 mcc users 8.4M May 12 08:13 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1621321798193

Running Version 0
[2021-05-18 07:09:59] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2021-05-18 07:09:59] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-18 07:10:00] [INFO ] Load time of PNML (sax parser for PT used): 339 ms
[2021-05-18 07:10:00] [INFO ] Transformed 5622 places.
[2021-05-18 07:10:00] [INFO ] Transformed 5449 transitions.
[2021-05-18 07:10:00] [INFO ] Parsed PT model containing 5622 places and 5449 transitions in 406 ms.
Incomplete random walk after 10000 steps, including 386 resets, run finished after 1396 ms. (steps per millisecond=7 ) properties (out of 5622) seen :3816
Running SMT prover for 1806 properties.
// Phase 1: matrix 5449 rows 5622 cols
[2021-05-18 07:10:02] [INFO ] Computed 173 place invariants in 800 ms
[2021-05-18 07:10:27] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
Fused 1806 Parikh solutions to 1 different solutions.
Support contains 1806 out of 5622 places. Attempting structural reductions.
Starting structural reductions, iteration 0 : 5622/5622 places, 5449/5449 transitions.
Graph (complete) has 11001 edges and 5622 vertex of which 3565 are kept as prefixes of interest. Removing 2057 places using SCC suffix rule.18 ms
Discarding 2057 places :
Also discarding 674 output transitions
Drop transitions removed 674 transitions
Drop transitions removed 674 transitions
Reduce isomorphic transitions removed 674 transitions.
Drop transitions removed 710 transitions
Trivial Post-agglo rules discarded 710 transitions
Performed 710 trivial Post agglomeration. Transition count delta: 710
Iterating post reduction 0 with 1384 rules applied. Total rules applied 1385 place count 3565 transition count 3391
Reduce places removed 712 places and 0 transitions.
Drop transitions removed 66 transitions
Trivial Post-agglo rules discarded 66 transitions
Performed 66 trivial Post agglomeration. Transition count delta: 66
Iterating post reduction 1 with 778 rules applied. Total rules applied 2163 place count 2853 transition count 3325
Reduce places removed 66 places and 0 transitions.
Iterating post reduction 2 with 66 rules applied. Total rules applied 2229 place count 2787 transition count 3325
Performed 66 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 3 with 66 Pre rules applied. Total rules applied 2229 place count 2787 transition count 3259
Deduced a syphon composed of 66 places in 6 ms
Reduce places removed 66 places and 0 transitions.
Iterating global reduction 3 with 132 rules applied. Total rules applied 2361 place count 2721 transition count 3259
Applied a total of 2361 rules in 435 ms. Remains 2721 /5622 variables (removed 2901) and now considering 3259/5449 (removed 2190) transitions.
Finished structural reductions, in 1 iterations. Remains : 2721/5622 places, 3259/5449 transitions.
[2021-05-18 07:10:28] [INFO ] Flatten gal took : 228 ms
[2021-05-18 07:10:28] [INFO ] Flatten gal took : 147 ms
[2021-05-18 07:10:28] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality16170351368735726393.gal : 53 ms
[2021-05-18 07:10:28] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality9641516649256585818.prop : 6 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality16170351368735726393.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality9641516649256585818.prop, --nowitness, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality16170351368735726393.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality9641516649256585818.prop --nowitness --gen-order FOLLOW
Loading property file /tmp/ReachabilityCardinality9641516649256585818.prop.
Invariant property smplace_55 does not hold.
Invariant property smplace_54 does not hold.
Invariant property smplace_53 does not hold.
SDD proceeding with computation,1803 properties remain. new max is 2
SDD size :1 after 13
Invariant property smplace_57 does not hold.
Invariant property smplace_56 does not hold.
SDD proceeding with computation,1801 properties remain. new max is 2
SDD size :13 after 15
Detected timeout of ITS tools.
[2021-05-18 07:10:43] [INFO ] Flatten gal took : 118 ms
[2021-05-18 07:10:43] [INFO ] Applying decomposition
[2021-05-18 07:10:44] [INFO ] Flatten gal took : 108 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph6643014519317996185.txt, -o, /tmp/graph6643014519317996185.bin, -w, /tmp/graph6643014519317996185.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph6643014519317996185.bin, -l, -1, -v, -w, /tmp/graph6643014519317996185.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-18 07:10:44] [INFO ] Decomposing Gal with order
[2021-05-18 07:10:44] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-18 07:10:45] [INFO ] Removed a total of 3307 redundant transitions.
[2021-05-18 07:10:45] [INFO ] Flatten gal took : 321 ms
[2021-05-18 07:10:45] [INFO ] Fuse similar labels procedure discarded/fused a total of 18 labels/synchronizations in 59 ms.
[2021-05-18 07:10:45] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality16490279116630041901.gal : 31 ms
[2021-05-18 07:10:45] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality15574396594165355628.prop : 4 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality16490279116630041901.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality15574396594165355628.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality16490279116630041901.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality15574396594165355628.prop --nowitness
Loading property file /tmp/ReachabilityCardinality15574396594165355628.prop.
Invariant property smplace_689 does not hold.
Invariant property smplace_688 does not hold.
Invariant property smplace_687 does not hold.
Invariant property smplace_686 does not hold.
Invariant property smplace_685 does not hold.
Invariant property smplace_521 does not hold.
Invariant property smplace_520 does not hold.
Invariant property smplace_180 does not hold.
Invariant property smplace_179 does not hold.
Invariant property smplace_178 does not hold.
Invariant property smplace_177 does not hold.
Invariant property smplace_176 does not hold.
Invariant property smplace_12 does not hold.
Invariant property smplace_11 does not hold.
Invariant property smplace_10 does not hold.
Invariant property smplace_9 does not hold.
Invariant property smplace_8 does not hold.
SDD proceeding with computation,1784 properties remain. new max is 2
SDD size :1 after 45
Detected timeout of ITS tools.
Built C files in :
/tmp/ltsmin3984701060455671910
[2021-05-18 07:11:00] [INFO ] Built C files in 74ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin3984701060455671910
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin3984701060455671910]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin3984701060455671910] killed by timeout after 1 SECONDS
java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin3984701060455671910] killed by timeout after 1 SECONDS
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:79)
at java.base/java.lang.Thread.run(Thread.java:834)
Finished random walk after 33354 steps, including 2530 resets, run visited all 1784 properties in 719 ms. (steps per millisecond=46 )
Able to resolve query StableMarking after proving 5622 properties.
FORMULA StableMarking FALSE TECHNIQUES RANDOM_WALK DECISION_DIAGRAMS COLLATERAL_PROCESSING TOPOLOGICAL USE_NUPN

BK_STOP 1621321863416

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StableMarking = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StableMarking -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="LeafsetExtension-PT-S32C3"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is LeafsetExtension-PT-S32C3, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r299-tall-162124165100333"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/LeafsetExtension-PT-S32C3.tgz
mv LeafsetExtension-PT-S32C3 execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StableMarking.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;