Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fko/mcc2021-input.r159-oct2-162089268300376.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fko/mcc2021-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
....................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is PolyORBNT-COL-S05J30, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r159-oct2-162089268300376
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 436K
-rw-r--r-- 1 mcc users 14K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 93K May 10 09:43 CTLCardinality.xml
-rw-r--r-- 1 mcc users 12K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 85K May 10 09:43 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.8K Mar 28 16:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Mar 28 16:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K Mar 28 16:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K Mar 28 16:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.3K Mar 27 09:31 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K Mar 27 09:31 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 3.3K Mar 25 12:19 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K Mar 25 12:18 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Mar 22 08:13 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Mar 22 08:12 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 5 16:51 equiv_pt
-rw-r--r-- 1 mcc users 7 May 5 16:51 instance
-rw-r--r-- 1 mcc users 5 May 5 16:51 iscolored
-rw-r--r-- 1 mcc users 92K May 5 16:51 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1621212363570

Running Version 0
[2021-05-17 00:46:05] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2021-05-17 00:46:05] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-17 00:46:05] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
[2021-05-17 00:46:05] [WARNING] Using fallBack plugin, rng conformance not checked
[2021-05-17 00:46:05] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 557 ms
[2021-05-17 00:46:05] [INFO ] ms1 symmetric to ms4 in transition trans_489
[2021-05-17 00:46:05] [INFO ] ms4 symmetric to ms2 in transition trans_489
[2021-05-17 00:46:05] [INFO ] ms2 symmetric to ms3 in transition trans_489
[2021-05-17 00:46:05] [INFO ] ms1 symmetric to ms2 in transition trans_488
[2021-05-17 00:46:05] [INFO ] ms2 symmetric to ms3 in transition trans_488
[2021-05-17 00:46:05] [INFO ] ms1 symmetric to ms2 in transition trans_487
[2021-05-17 00:46:05] [INFO ] Imported 48 HL places and 38 HL transitions for a total of 519 PT places and 1492.0 transition bindings in 24 ms.
[2021-05-17 00:46:05] [INFO ] Unfolded HLPN to a Petri net with 519 places and 775 transitions in 25 ms.
[2021-05-17 00:46:05] [INFO ] Unfolded HLPN properties in 0 ms.
Deduced a syphon composed of 30 places in 4 ms
Reduce places removed 30 places and 30 transitions.
Starting structural reductions, iteration 0 : 489/489 places, 745/745 transitions.
[2021-05-17 00:46:06] [INFO ] Flow matrix only has 741 transitions (discarded 4 similar events)
// Phase 1: matrix 741 rows 489 cols
[2021-05-17 00:46:06] [INFO ] Computed 82 place invariants in 48 ms
[2021-05-17 00:46:06] [INFO ] Dead Transitions using invariants and state equation in 588 ms returned [227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 268, 269, 270, 271, 272, 274, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 303, 304, 305, 306, 307, 309, 312, 313, 314, 315, 316, 317, 319, 322, 326, 327, 328, 329, 330, 331, 332, 334, 337, 341, 346]
Found 95 dead transitions using SMT.
Drop transitions removed 95 transitions
Dead transitions reduction (with SMT) triggered by suspicious arc values removed 95 transitions :[346, 341, 337, 334, 332, 331, 330, 329, 328, 327, 326, 322, 319, 317, 316, 315, 314, 313, 312, 309, 307, 306, 305, 304, 303, 301, 300, 299, 298, 297, 296, 295, 294, 293, 292, 291, 290, 289, 288, 287, 286, 285, 284, 283, 282, 281, 280, 279, 278, 277, 274, 272, 271, 270, 269, 268, 266, 265, 264, 263, 262, 261, 260, 259, 258, 257, 256, 255, 254, 253, 252, 251, 250, 249, 248, 246, 245, 244, 243, 242, 241, 240, 239, 238, 237, 236, 235, 234, 233, 232, 231, 230, 229, 228, 227]
[2021-05-17 00:46:06] [INFO ] Redundant transitions in 29 ms returned []
[2021-05-17 00:46:06] [INFO ] Flow matrix only has 646 transitions (discarded 4 similar events)
// Phase 1: matrix 646 rows 489 cols
[2021-05-17 00:46:06] [INFO ] Computed 82 place invariants in 22 ms
[2021-05-17 00:46:07] [INFO ] Dead Transitions using invariants and state equation in 371 ms returned []
Starting structural reductions, iteration 1 : 489/489 places, 650/745 transitions.
[2021-05-17 00:46:07] [INFO ] Redundant transitions in 4 ms returned []
[2021-05-17 00:46:07] [INFO ] Flow matrix only has 646 transitions (discarded 4 similar events)
// Phase 1: matrix 646 rows 489 cols
[2021-05-17 00:46:07] [INFO ] Computed 82 place invariants in 10 ms
[2021-05-17 00:46:07] [INFO ] Dead Transitions using invariants and state equation in 366 ms returned []
Finished structural reductions, in 2 iterations. Remains : 489/489 places, 650/745 transitions.
Final net has 489 places and 650 transitions.
[2021-05-17 00:46:07] [INFO ] Flatten gal took : 87 ms
[2021-05-17 00:46:07] [INFO ] Applying decomposition
[2021-05-17 00:46:07] [INFO ] Flatten gal took : 56 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph14148639350974715717.txt, -o, /tmp/graph14148639350974715717.bin, -w, /tmp/graph14148639350974715717.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph14148639350974715717.bin, -l, -1, -v, -w, /tmp/graph14148639350974715717.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-17 00:46:07] [INFO ] Decomposing Gal with order
[2021-05-17 00:46:07] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-17 00:46:08] [INFO ] Removed a total of 809 redundant transitions.
[2021-05-17 00:46:08] [INFO ] Flatten gal took : 177 ms
[2021-05-17 00:46:08] [INFO ] Fuse similar labels procedure discarded/fused a total of 191 labels/synchronizations in 21 ms.
[2021-05-17 00:46:08] [INFO ] Time to serialize gal into /tmp/StateSpace1071429329701835828.gal : 11 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/StateSpace1071429329701835828.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/StateSpace1071429329701835828.gal -t CGAL --stats
Detected timeout of ITS tools.
[2021-05-17 01:06:10] [INFO ] Applying decomposition
[2021-05-17 01:06:11] [INFO ] Flatten gal took : 333 ms
[2021-05-17 01:06:11] [INFO ] Decomposing Gal with order
[2021-05-17 01:06:11] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-17 01:06:12] [INFO ] Removed a total of 2111 redundant transitions.
[2021-05-17 01:06:12] [INFO ] Flatten gal took : 384 ms
[2021-05-17 01:06:12] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 31 ms.
[2021-05-17 01:06:12] [INFO ] Time to serialize gal into /tmp/StateSpace17054996539685109151.gal : 16 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/StateSpace17054996539685109151.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/StateSpace17054996539685109151.gal -t CGAL --stats
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst\_mod\_flat,3.52927e+09,422.325,4376040,1.78263e+06,33,7.3531e+06,2176,1630,4.94606e+06,50,1927,0
Total reachable state count : 3529271162

Max variable value : 10
STATE_SPACE MAX_TOKEN_IN_PLACE 10 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Maximum sum along a path : 68
STATE_SPACE MAX_TOKEN_PER_MARKING 68 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Exact state count : 3529271162
STATE_SPACE STATES 3529271162 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN

BK_STOP 1621214022702

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBNT-COL-S05J30"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is PolyORBNT-COL-S05J30, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r159-oct2-162089268300376"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBNT-COL-S05J30.tgz
mv PolyORBNT-COL-S05J30 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;