Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2021-input.r121-tall-162075406500119.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2021-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is HexagonalGrid-PT-516, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r121-tall-162075406500119
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 1.8M
-rw-r--r-- 1 mcc users 19K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 147K May 10 09:43 CTLCardinality.xml
-rw-r--r-- 1 mcc users 12K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 81K May 10 09:43 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.4K May 6 14:48 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.7K Apr 26 07:41 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Apr 26 07:41 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Apr 26 07:41 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 26 07:41 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.8K Mar 23 11:28 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Mar 23 11:28 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.9K Mar 22 21:01 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K Mar 22 21:01 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Mar 22 09:15 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Mar 22 09:15 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 5 16:51 equiv_col
-rw-r--r-- 1 mcc users 4 May 5 16:51 instance
-rw-r--r-- 1 mcc users 6 May 5 16:51 iscolored
-rwxr-xr-x 1 mcc users 1.4M May 5 16:51 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-00
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-01
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-02
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-03
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-04
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-05
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-06
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-07
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-08
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-09
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-10
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-11
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-12
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-13
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-14
FORMULA_NAME HexagonalGrid-PT-516-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1620790075168

Running Version 0
[2021-05-12 03:28:08] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityFireability, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2021-05-12 03:28:08] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-12 03:28:08] [INFO ] Load time of PNML (sax parser for PT used): 150 ms
[2021-05-12 03:28:08] [INFO ] Transformed 1267 places.
[2021-05-12 03:28:08] [INFO ] Transformed 2250 transitions.
[2021-05-12 03:28:08] [INFO ] Parsed PT model containing 1267 places and 2250 transitions in 213 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityFireability.xml in 9 ms.
Working with output stream class java.io.PrintStream
Incomplete random walk after 10000 steps, including 2 resets, run finished after 779 ms. (steps per millisecond=12 ) properties (out of 16) seen :14
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-15 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-14 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-13 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-12 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-11 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-10 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-09 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-06 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-05 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-04 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-03 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-02 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-01 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-00 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 114 ms. (steps per millisecond=87 ) properties (out of 2) seen :1
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-07 TRUE TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 114 ms. (steps per millisecond=87 ) properties (out of 1) seen :0
Running SMT prover for 1 properties.
// Phase 1: matrix 2250 rows 1267 cols
[2021-05-12 03:28:10] [INFO ] Computed 482 place invariants in 175 ms
[2021-05-12 03:28:10] [INFO ] [Real]Absence check using 481 positive place invariants in 93 ms returned sat
[2021-05-12 03:28:10] [INFO ] [Real]Absence check using 481 positive and 1 generalized place invariants in 28 ms returned sat
[2021-05-12 03:28:10] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-12 03:28:11] [INFO ] [Real]Absence check using state equation in 652 ms returned sat
[2021-05-12 03:28:11] [INFO ] Solution in real domain found non-integer solution.
[2021-05-12 03:28:11] [INFO ] [Nat]Absence check using 481 positive place invariants in 77 ms returned sat
[2021-05-12 03:28:11] [INFO ] [Nat]Absence check using 481 positive and 1 generalized place invariants in 25 ms returned sat
[2021-05-12 03:28:11] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2021-05-12 03:28:11] [INFO ] [Nat]Absence check using state equation in 601 ms returned sat
[2021-05-12 03:28:12] [INFO ] Computed and/alt/rep : 1884/1884/1884 causal constraints (skipped 0 transitions) in 122 ms.
[2021-05-12 03:28:16] [WARNING] SMT solver failed with error :java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Failed to assert expression: java.io.IOException: Stream close... while checking expression at index 0
Support contains 8 out of 1267 places. Attempting structural reductions.
Starting structural reductions, iteration 0 : 1267/1267 places, 2250/2250 transitions.
Applied a total of 0 rules in 8060 ms. Remains 1267 /1267 variables (removed 0) and now considering 2250/2250 (removed 0) transitions.
Finished structural reductions, in 1 iterations. Remains : 1267/1267 places, 2250/2250 transitions.
[2021-05-12 03:28:24] [INFO ] Flatten gal took : 218 ms
[2021-05-12 03:28:24] [INFO ] Flatten gal took : 129 ms
[2021-05-12 03:28:24] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality11955531011014435169.gal : 45 ms
[2021-05-12 03:28:24] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality11110909931906111176.prop : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality11955531011014435169.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality11110909931906111176.prop, --nowitness, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality11955531011014435169.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality11110909931906111176.prop --nowitness --gen-order FOLLOW
Loading property file /tmp/ReachabilityCardinality11110909931906111176.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 6
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :6 after 25
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :25 after 160
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :160 after 1752
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :1752 after 759200
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :759200 after 6.51802e+06
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :6.51802e+06 after 4.11726e+07
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :4.11726e+07 after 1.03035e+08
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :1.03035e+08 after 9.89789e+09
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :9.89789e+09 after 1.31034e+10
SDD proceeding with computation,1 properties remain. new max is 4096
SDD size :1.31034e+10 after 8.87643e+11
Detected timeout of ITS tools.
[2021-05-12 03:28:39] [INFO ] Flatten gal took : 95 ms
[2021-05-12 03:28:39] [INFO ] Applying decomposition
[2021-05-12 03:28:39] [INFO ] Flatten gal took : 94 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph7675774739866978644.txt, -o, /tmp/graph7675774739866978644.bin, -w, /tmp/graph7675774739866978644.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph7675774739866978644.bin, -l, -1, -v, -w, /tmp/graph7675774739866978644.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-12 03:28:41] [INFO ] Decomposing Gal with order
[2021-05-12 03:28:41] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-12 03:28:41] [INFO ] Removed a total of 2928 redundant transitions.
[2021-05-12 03:28:41] [INFO ] Flatten gal took : 239 ms
[2021-05-12 03:28:41] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 15 ms.
[2021-05-12 03:28:41] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality14491804923439615750.gal : 33 ms
[2021-05-12 03:28:41] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality11767400274437966156.prop : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality14491804923439615750.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality11767400274437966156.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality14491804923439615750.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality11767400274437966156.prop --nowitness
Loading property file /tmp/ReachabilityCardinality11767400274437966156.prop.
Detected timeout of ITS tools.
Built C files in :
/tmp/ltsmin3106685755818930023
[2021-05-12 03:28:57] [INFO ] Built C files in 38ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin3106685755818930023
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin3106685755818930023]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin3106685755818930023] killed by timeout after 1 SECONDS
java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202104292328/bin/include/, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/tmp/ltsmin3106685755818930023] killed by timeout after 1 SECONDS
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:79)
at java.base/java.lang.Thread.run(Thread.java:834)
Finished random walk after 20817 steps, including 0 resets, run visited all 1 properties in 1387 ms. (steps per millisecond=15 )
FORMULA HexagonalGrid-PT-516-ReachabilityFireability-08 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
All properties solved without resorting to model-checking.

BK_STOP 1620790141177

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityFireability = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution ReachabilityFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityFireability -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="HexagonalGrid-PT-516"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is HexagonalGrid-PT-516, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r121-tall-162075406500119"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/HexagonalGrid-PT-516.tgz
mv HexagonalGrid-PT-516 execution
cd execution
if [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "UpperBounds" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] || [ "ReachabilityFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;