Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2021-input.r083-tall-162048876000887.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2021-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is FamilyReunion-COL-L00400M0040C020P020G001, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r083-tall-162048876000887
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 484K
-rw-r--r-- 1 mcc users 9.3K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 88K May 5 16:58 CTLCardinality.xml
-rw-r--r-- 1 mcc users 15K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 78K May 5 16:58 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 7.0K May 6 14:48 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.7K Mar 28 16:10 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Mar 28 16:10 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.9K Mar 28 16:10 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K Mar 28 16:10 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.8K Mar 27 20:33 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Mar 27 20:26 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 3.5K Mar 27 19:49 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K Mar 27 19:43 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 22 07:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 5 16:51 equiv_pt
-rw-r--r-- 1 mcc users 24 May 5 16:51 instance
-rw-r--r-- 1 mcc users 5 May 5 16:51 iscolored
-rw-r--r-- 1 mcc users 159K May 5 16:51 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-00
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-01
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-02
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-03
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-04
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-05
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-06
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-07
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-08
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-09
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-10
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-11
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-12
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-13
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-14
FORMULA_NAME FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1620688297925

Running Version 0
[2021-05-10 23:11:39] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityFireability, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2021-05-10 23:11:39] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-10 23:11:39] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
[2021-05-10 23:11:40] [WARNING] Using fallBack plugin, rng conformance not checked
[2021-05-10 23:11:40] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 724 ms
[2021-05-10 23:11:40] [INFO ] Detected 5 constant HL places corresponding to 106 PT places.
[2021-05-10 23:11:40] [INFO ] Imported 104 HL places and 66 HL transitions for a total of 538109 PT places and 508890.0 transition bindings in 53 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityFireability.xml in 12 ms.
Working with output stream class java.io.PrintStream
[2021-05-10 23:11:40] [INFO ] Built PT skeleton of HLPN with 104 places and 66 transitions in 5 ms.
[2021-05-10 23:11:40] [INFO ] Skeletonized HLPN properties in 0 ms.
Successfully produced net in file /tmp/petri1000_16870272268282880171.dot
Reduce places removed 5 places and 0 transitions.
Finished random walk after 0 steps, including 0 resets, run visited all 0 properties in 1 ms. (steps per millisecond=0 )
[2021-05-10 23:11:40] [INFO ] Flatten gal took : 30 ms
[2021-05-10 23:11:40] [INFO ] Flatten gal took : 9 ms
[2021-05-10 23:11:42] [INFO ] Unfolded HLPN to a Petri net with 538109 places and 508489 transitions in 1850 ms.
[2021-05-10 23:11:42] [INFO ] Unfolded HLPN properties in 125 ms.
Successfully produced net in file /tmp/petri1001_11895422731546143343.dot
[2021-05-10 23:11:43] [INFO ] Reduced 8020 identical enabling conditions.
[2021-05-10 23:11:43] [INFO ] Reduced 8020 identical enabling conditions.
[2021-05-10 23:11:43] [INFO ] Reduced 16040 identical enabling conditions.
[2021-05-10 23:11:43] [INFO ] Reduced 16040 identical enabling conditions.
[2021-05-10 23:11:43] [INFO ] Reduced 16040 identical enabling conditions.
Deduced a syphon composed of 401 places in 1906 ms
Reduce places removed 507 places and 0 transitions.
Interrupted random walk after 1930 steps, including 0 resets, run timeout after 30001 ms. (steps per millisecond=0 ) properties seen :{0=1, 10=1}
FORMULA FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-10 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA FamilyReunion-COL-L00400M0040C020P020G001-ReachabilityFireability-00 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 589 ms. (steps per millisecond=16 ) properties (out of 14) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 2573 ms. (steps per millisecond=3 ) properties (out of 14) seen :0
Interrupted Best-First random walk after 3012 steps, including 0 resets, run timeout after 5261 ms. (steps per millisecond=0 ) properties seen :{}
Interrupted Best-First random walk after 7229 steps, including 1 resets, run timeout after 5026 ms. (steps per millisecond=1 ) properties seen :{}
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 697 ms. (steps per millisecond=14 ) properties (out of 14) seen :0
Interrupted Best-First random walk after 2410 steps, including 0 resets, run timeout after 6352 ms. (steps per millisecond=0 ) properties seen :{}
Interrupted Best-First random walk after 4981 steps, including 1 resets, run timeout after 5329 ms. (steps per millisecond=0 ) properties seen :{}
Interrupted Best-First random walk after 2772 steps, including 0 resets, run timeout after 5901 ms. (steps per millisecond=0 ) properties seen :{}
Interrupted Best-First random walk after 3494 steps, including 0 resets, run timeout after 5238 ms. (steps per millisecond=0 ) properties seen :{}
Interrupted Best-First random walk after 7031 steps, including 1 resets, run timeout after 5012 ms. (steps per millisecond=1 ) properties seen :{}
Interrupted Best-First random walk after 1326 steps, including 0 resets, run timeout after 7251 ms. (steps per millisecond=0 ) properties seen :{}
Interrupted Best-First random walk after 844 steps, including 0 resets, run timeout after 5829 ms. (steps per millisecond=0 ) properties seen :{}
Interrupted Best-First random walk after 3654 steps, including 0 resets, run timeout after 5171 ms. (steps per millisecond=0 ) properties seen :{}
Interrupted Best-First random walk after 1848 steps, including 0 resets, run timeout after 6682 ms. (steps per millisecond=0 ) properties seen :{}
Running SMT prover for 14 properties.
// Phase 1: matrix 508489 rows 537602 cols
[2021-05-10 23:15:41] [WARNING] Invariant computation timed out after 120 seconds.
[2021-05-10 23:16:07] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
Fused 14 Parikh solutions to 1 different solutions.
Support contains 234669 out of 537602 places. Attempting structural reductions.
Starting structural reductions, iteration 0 : 537602/537602 places, 508489/508489 transitions.
Graph (complete) has 892668 edges and 537602 vertex of which 535461 are kept as prefixes of interest. Removing 2141 places using SCC suffix rule.672 ms
Discarding 2141 places :
Also discarding 401 output transitions
Drop transitions removed 401 transitions
Drop transitions removed 4812 transitions
Reduce isomorphic transitions removed 4812 transitions.
Discarding 82205 places :
Implicit places reduction removed 82205 places
Drop transitions removed 32882 transitions
Trivial Post-agglo rules discarded 32882 transitions
Performed 32882 trivial Post agglomeration. Transition count delta: 32882
Iterating post reduction 0 with 119899 rules applied. Total rules applied 119900 place count 453256 transition count 470394
Reduce places removed 32882 places and 0 transitions.
Performed 2663 Post agglomeration using F-continuation condition.
Performed 5420 Post agglomeration using F-continuation condition.
Performed 8216 Post agglomeration using F-continuation condition.
Performed 11046 Post agglomeration using F-continuation condition.
Performed 12984 Post agglomeration using F-continuation condition.
Performed 15606 Post agglomeration using F-continuation condition.
Performed 18305 Post agglomeration using F-continuation condition.
Performed 20980 Post agglomeration using F-continuation condition.
Performed 23670 Post agglomeration using F-continuation condition.
Performed 26333 Post agglomeration using F-continuation condition.
Performed 28768 Post agglomeration using F-continuation condition.
Performed 31375 Post agglomeration using F-continuation condition.
Performed 34008 Post agglomeration using F-continuation condition.
Performed 36799 Post agglomeration using F-continuation condition.
Performed 37293 Post agglomeration using F-continuation condition.Transition count delta: 37293
Iterating post reduction 1 with 70175 rules applied. Total rules applied 190075 place count 420374 transition count 433101
Reduce places removed 37293 places and 0 transitions.
Iterating post reduction 2 with 37293 rules applied. Total rules applied 227368 place count 383081 transition count 433101
Performed 34085 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 3 with 34085 Pre rules applied. Total rules applied 227368 place count 383081 transition count 399016
Deduced a syphon composed of 34085 places in 1284 ms
Reduce places removed 34085 places and 0 transitions.
Iterating global reduction 3 with 68170 rules applied. Total rules applied 295538 place count 348996 transition count 399016
Discarding 8421 places :
Implicit places reduction removed 8421 places
Iterating post reduction 3 with 8421 rules applied. Total rules applied 303959 place count 340575 transition count 399016
Performed 802 Post agglomeration using F-continuation condition.Transition count delta: 802
Deduced a syphon composed of 802 places in 824 ms
Reduce places removed 802 places and 0 transitions.
Iterating global reduction 4 with 1604 rules applied. Total rules applied 305563 place count 339773 transition count 398214
Free-agglomeration rule (complex) applied 25263 times.
Iterating global reduction 4 with 25263 rules applied. Total rules applied 330826 place count 339773 transition count 372951
Ensure Unique test removed 401 places
Reduce places removed 25664 places and 0 transitions.
Iterating post reduction 4 with 25664 rules applied. Total rules applied 356490 place count 314109 transition count 372951
Discarding 40 places :
Symmetric choice reduction at 5 with 40 rule applications. Total rules 356530 place count 314069 transition count 356911
Iterating global reduction 5 with 40 rules applied. Total rules applied 356570 place count 314069 transition count 356911
Applied a total of 356570 rules in 1703726 ms. Remains 314069 /537602 variables (removed 223533) and now considering 356911/508489 (removed 151578) transitions.
Finished structural reductions, in 1 iterations. Remains : 314069/537602 places, 356911/508489 transitions.
[2021-05-10 23:45:02] [INFO ] Flatten gal took : 13473 ms
[2021-05-10 23:45:14] [INFO ] Flatten gal took : 12753 ms
[2021-05-10 23:45:16] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality1776450254835020965.gal : 1202 ms
[2021-05-10 23:45:17] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality6145923304396255323.prop : 632 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/ReachabilityCardinality1776450254835020965.gal, -t, CGAL, -reachable-file, /tmp/ReachabilityCardinality6145923304396255323.prop, --nowitness, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /tmp/ReachabilityCardinality1776450254835020965.gal -t CGAL -reachable-file /tmp/ReachabilityCardinality6145923304396255323.prop --nowitness --gen-order FOLLOW
Detected timeout of ITS tools.
[2021-05-10 23:45:47] [INFO ] Flatten gal took : 12947 ms
[2021-05-10 23:45:47] [INFO ] Applying decomposition
[2021-05-10 23:45:59] [INFO ] Flatten gal took : 12088 ms

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityFireability = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution ReachabilityFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityFireability -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="FamilyReunion-COL-L00400M0040C020P020G001"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is FamilyReunion-COL-L00400M0040C020P020G001, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r083-tall-162048876000887"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/FamilyReunion-COL-L00400M0040C020P020G001.tgz
mv FamilyReunion-COL-L00400M0040C020P020G001 execution
cd execution
if [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "UpperBounds" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] || [ "ReachabilityFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;