Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2021-input.r071-tall-162039089100406.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2021-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is DNAwalker-PT-16redondantChoiceR, examination is ReachabilityDeadlock
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r071-tall-162039089100406
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 588K
-rw-r--r-- 1 mcc users 13K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 129K May 5 16:58 CTLCardinality.xml
-rw-r--r-- 1 mcc users 12K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 91K May 5 16:58 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.4K Mar 28 16:00 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K Mar 28 16:00 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Mar 28 16:00 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Mar 28 16:00 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.7K Mar 23 10:03 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Mar 23 10:03 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.9K Mar 22 17:37 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K Mar 22 17:37 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Mar 22 09:10 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K Mar 22 09:10 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 5 16:51 equiv_col
-rw-r--r-- 1 mcc users 19 May 5 16:51 instance
-rw-r--r-- 1 mcc users 6 May 5 16:51 iscolored
-rw-r--r-- 1 mcc users 211K May 5 16:51 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME ReachabilityDeadlock

=== Now, execution of the tool begins

BK_START 1620480823149

Running Version 0
[2021-05-08 13:33:44] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2021-05-08 13:33:44] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-08 13:33:44] [INFO ] Load time of PNML (sax parser for PT used): 77 ms
[2021-05-08 13:33:44] [INFO ] Transformed 43 places.
[2021-05-08 13:33:44] [INFO ] Transformed 490 transitions.
[2021-05-08 13:33:44] [INFO ] Parsed PT model containing 43 places and 490 transitions in 117 ms.
Parsed 1 properties from file /home/mcc/execution/ReachabilityDeadlock.xml in 24 ms.
Working with output stream class java.io.PrintStream
Built sparse matrix representations for Structural reductions in 4 ms.16467KB memory used
Starting structural reductions, iteration 0 : 43/43 places, 490/490 transitions.
Applied a total of 0 rules in 48 ms. Remains 43 /43 variables (removed 0) and now considering 490/490 (removed 0) transitions.
[2021-05-08 13:33:44] [INFO ] Flow matrix only has 489 transitions (discarded 1 similar events)
// Phase 1: matrix 489 rows 43 cols
[2021-05-08 13:33:44] [INFO ] Computed 0 place invariants in 12 ms
[2021-05-08 13:33:45] [INFO ] Dead Transitions using invariants and state equation in 310 ms returned []
Finished structural reductions, in 1 iterations. Remains : 43/43 places, 490/490 transitions.
Starting structural reductions, iteration 0 : 43/43 places, 490/490 transitions.
Applied a total of 0 rules in 20 ms. Remains 43 /43 variables (removed 0) and now considering 490/490 (removed 0) transitions.
[2021-05-08 13:33:45] [INFO ] Flow matrix only has 489 transitions (discarded 1 similar events)
// Phase 1: matrix 489 rows 43 cols
[2021-05-08 13:33:45] [INFO ] Computed 0 place invariants in 6 ms
[2021-05-08 13:33:45] [INFO ] Implicit Places using invariants in 64 ms returned []
[2021-05-08 13:33:45] [INFO ] Flow matrix only has 489 transitions (discarded 1 similar events)
// Phase 1: matrix 489 rows 43 cols
[2021-05-08 13:33:45] [INFO ] Computed 0 place invariants in 4 ms
[2021-05-08 13:33:45] [INFO ] State equation strengthened by 161 read => feed constraints.
[2021-05-08 13:33:45] [INFO ] Implicit Places using invariants and state equation in 552 ms returned []
Implicit Place search using SMT with State Equation took 617 ms to find 0 implicit places.
[2021-05-08 13:33:45] [INFO ] Redundant transitions in 28 ms returned []
[2021-05-08 13:33:45] [INFO ] Flow matrix only has 489 transitions (discarded 1 similar events)
// Phase 1: matrix 489 rows 43 cols
[2021-05-08 13:33:45] [INFO ] Computed 0 place invariants in 1 ms
[2021-05-08 13:33:46] [INFO ] Dead Transitions using invariants and state equation in 177 ms returned []
Finished structural reductions, in 1 iterations. Remains : 43/43 places, 490/490 transitions.
Finished random walk after 33 steps, including 0 resets, run found a deadlock after 2 ms. (steps per millisecond=16 )
FORMULA ReachabilityDeadlock TRUE TECHNIQUES TOPOLOGICAL STRUCTURAL_REDUCTION RANDOM_WALK

BK_STOP 1620480827212

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityDeadlock = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DNAwalker-PT-16redondantChoiceR"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is DNAwalker-PT-16redondantChoiceR, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r071-tall-162039089100406"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/DNAwalker-PT-16redondantChoiceR.tgz
mv DNAwalker-PT-16redondantChoiceR execution
cd execution
if [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "UpperBounds" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] || [ "ReachabilityDeadlock" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityDeadlock"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;