Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2021-input.r007-tall-162037989900363.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2021-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is Angiogenesis-PT-50, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r007-tall-162037989900363
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 404K
-rw-r--r-- 1 mcc users 17K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 113K May 10 09:42 CTLCardinality.xml
-rw-r--r-- 1 mcc users 9.2K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 91K May 10 09:42 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K May 6 14:48 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.5K Apr 26 07:41 LTLCardinality.txt
-rw-r--r-- 1 mcc users 23K Apr 26 07:41 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K Apr 26 07:41 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 26 07:41 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.8K Mar 23 01:46 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Mar 23 01:46 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.5K Mar 22 10:14 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K Mar 22 10:14 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Mar 22 09:09 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Mar 22 09:09 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 5 16:51 equiv_col
-rw-r--r-- 1 mcc users 3 May 5 16:51 instance
-rw-r--r-- 1 mcc users 6 May 5 16:51 iscolored
-rw-r--r-- 1 mcc users 33K May 5 16:51 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-00
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-01
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-02
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-03
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-04
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-05
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-06
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-07
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-08
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-09
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-10
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-11
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-12
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-13
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-14
FORMULA_NAME Angiogenesis-PT-50-CTLCardinality-15

=== Now, execution of the tool begins

BK_START 1620745992176

Running Version 0
[2021-05-11 15:13:14] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLCardinality, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2021-05-11 15:13:14] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2021-05-11 15:13:14] [INFO ] Load time of PNML (sax parser for PT used): 35 ms
[2021-05-11 15:13:14] [INFO ] Transformed 39 places.
[2021-05-11 15:13:14] [INFO ] Transformed 64 transitions.
[2021-05-11 15:13:14] [INFO ] Parsed PT model containing 39 places and 64 transitions in 75 ms.
Parsed 16 properties from file /home/mcc/execution/CTLCardinality.xml in 17 ms.
Support contains 39 out of 39 places. Attempting structural reductions.
Starting structural reductions, iteration 0 : 39/39 places, 64/64 transitions.
Applied a total of 0 rules in 8 ms. Remains 39 /39 variables (removed 0) and now considering 64/64 (removed 0) transitions.
// Phase 1: matrix 64 rows 39 cols
[2021-05-11 15:13:14] [INFO ] Computed 8 place invariants in 10 ms
[2021-05-11 15:13:14] [INFO ] Implicit Places using invariants in 90 ms returned []
// Phase 1: matrix 64 rows 39 cols
[2021-05-11 15:13:14] [INFO ] Computed 8 place invariants in 5 ms
[2021-05-11 15:13:14] [INFO ] Implicit Places using invariants and state equation in 59 ms returned []
Implicit Place search using SMT with State Equation took 176 ms to find 0 implicit places.
// Phase 1: matrix 64 rows 39 cols
[2021-05-11 15:13:14] [INFO ] Computed 8 place invariants in 2 ms
[2021-05-11 15:13:14] [INFO ] Dead Transitions using invariants and state equation in 52 ms returned []
Finished structural reductions, in 1 iterations. Remains : 39/39 places, 64/64 transitions.
[2021-05-11 15:13:15] [INFO ] Flatten gal took : 28 ms
[2021-05-11 15:13:15] [INFO ] Flatten gal took : 11 ms
[2021-05-11 15:13:15] [INFO ] Input system was already deterministic with 64 transitions.
Incomplete random walk after 100044 steps, including 2 resets, run finished after 99 ms. (steps per millisecond=1010 ) properties (out of 78) seen :73
Running SMT prover for 5 properties.
// Phase 1: matrix 64 rows 39 cols
[2021-05-11 15:13:15] [INFO ] Computed 8 place invariants in 3 ms
[2021-05-11 15:13:15] [INFO ] [Real]Absence check using 8 positive place invariants in 40 ms returned sat
[2021-05-11 15:13:15] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-11 15:13:15] [INFO ] [Real]Absence check using state equation in 21 ms returned sat
[2021-05-11 15:13:15] [INFO ] Solution in real domain found non-integer solution.
[2021-05-11 15:13:15] [INFO ] [Nat]Absence check using 8 positive place invariants in 2 ms returned sat
[2021-05-11 15:13:15] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2021-05-11 15:13:15] [INFO ] [Nat]Absence check using state equation in 21 ms returned sat
[2021-05-11 15:13:15] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 7 ms.
[2021-05-11 15:13:15] [INFO ] Added : 55 causal constraints over 12 iterations in 85 ms. Result :sat
[2021-05-11 15:13:15] [INFO ] [Real]Absence check using 8 positive place invariants in 1 ms returned unsat
[2021-05-11 15:13:15] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned unsat
[2021-05-11 15:13:15] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned sat
[2021-05-11 15:13:15] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2021-05-11 15:13:15] [INFO ] [Real]Absence check using state equation in 13 ms returned sat
[2021-05-11 15:13:15] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 9 ms.
[2021-05-11 15:13:15] [INFO ] Solution in real domain found non-integer solution.
[2021-05-11 15:13:15] [INFO ] [Nat]Absence check using 8 positive place invariants in 1 ms returned sat
[2021-05-11 15:13:15] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2021-05-11 15:13:15] [INFO ] [Nat]Absence check using state equation in 13 ms returned sat
[2021-05-11 15:13:15] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 4 ms.
[2021-05-11 15:13:15] [INFO ] Added : 55 causal constraints over 11 iterations in 60 ms. Result :sat
[2021-05-11 15:13:15] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned unsat
Successfully simplified 3 atomic propositions for a total of 16 simplifications.
Partial Post-agglomeration rule applied 1 times.
Drop transitions removed 1 transitions
Iterating global reduction 0 with 1 rules applied. Total rules applied 1 place count 39 transition count 64
Applied a total of 1 rules in 8 ms. Remains 39 /39 variables (removed 0) and now considering 64/64 (removed 0) transitions.
[2021-05-11 15:13:15] [INFO ] Flatten gal took : 6 ms
[2021-05-11 15:13:15] [INFO ] Flatten gal took : 5 ms
[2021-05-11 15:13:15] [INFO ] Input system was already deterministic with 64 transitions.
[2021-05-11 15:13:15] [INFO ] Flatten gal took : 5 ms
[2021-05-11 15:13:15] [INFO ] Flatten gal took : 6 ms
[2021-05-11 15:13:15] [INFO ] Time to serialize gal into /tmp/CTLCardinality17761845228231233888.gal : 1 ms
[2021-05-11 15:13:15] [INFO ] Time to serialize properties into /tmp/CTLCardinality6879865638160290745.ctl : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality17761845228231233888.gal, -t, CGAL, -ctl, /tmp/CTLCardinality6879865638160290745.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality17761845228231233888.gal -t CGAL -ctl /tmp/CTLCardinality6879865638160290745.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-11 15:13:45] [INFO ] Flatten gal took : 4 ms
[2021-05-11 15:13:45] [INFO ] Applying decomposition
[2021-05-11 15:13:45] [INFO ] Flatten gal took : 7 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph8052359619288134529.txt, -o, /tmp/graph8052359619288134529.bin, -w, /tmp/graph8052359619288134529.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph8052359619288134529.bin, -l, -1, -v, -w, /tmp/graph8052359619288134529.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-11 15:13:46] [INFO ] Decomposing Gal with order
[2021-05-11 15:13:46] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-11 15:13:46] [INFO ] Removed a total of 46 redundant transitions.
[2021-05-11 15:13:46] [INFO ] Flatten gal took : 99 ms
[2021-05-11 15:13:46] [INFO ] Fuse similar labels procedure discarded/fused a total of 29 labels/synchronizations in 8 ms.
[2021-05-11 15:13:46] [INFO ] Time to serialize gal into /tmp/CTLCardinality3065466536286318627.gal : 2 ms
[2021-05-11 15:13:46] [INFO ] Time to serialize properties into /tmp/CTLCardinality17438902977101545671.ctl : 13 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality3065466536286318627.gal, -t, CGAL, -ctl, /tmp/CTLCardinality17438902977101545671.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality3065466536286318627.gal -t CGAL -ctl /tmp/CTLCardinality17438902977101545671.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
Performed 3 Post agglomeration using F-continuation condition.Transition count delta: 3
Deduced a syphon composed of 3 places in 1 ms
Reduce places removed 3 places and 0 transitions.
Iterating global reduction 0 with 6 rules applied. Total rules applied 6 place count 36 transition count 61
Applied a total of 6 rules in 7 ms. Remains 36 /39 variables (removed 3) and now considering 61/64 (removed 3) transitions.
[2021-05-11 15:14:16] [INFO ] Flatten gal took : 4 ms
[2021-05-11 15:14:16] [INFO ] Flatten gal took : 4 ms
[2021-05-11 15:14:16] [INFO ] Input system was already deterministic with 61 transitions.
[2021-05-11 15:14:16] [INFO ] Flatten gal took : 4 ms
[2021-05-11 15:14:16] [INFO ] Flatten gal took : 3 ms
[2021-05-11 15:14:16] [INFO ] Time to serialize gal into /tmp/CTLCardinality5686626098898240359.gal : 1 ms
[2021-05-11 15:14:16] [INFO ] Time to serialize properties into /tmp/CTLCardinality6137534567232623430.ctl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality5686626098898240359.gal, -t, CGAL, -ctl, /tmp/CTLCardinality6137534567232623430.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality5686626098898240359.gal -t CGAL -ctl /tmp/CTLCardinality6137534567232623430.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-11 15:14:46] [INFO ] Flatten gal took : 18 ms
[2021-05-11 15:14:46] [INFO ] Applying decomposition
[2021-05-11 15:14:46] [INFO ] Flatten gal took : 4 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph14722025642112166404.txt, -o, /tmp/graph14722025642112166404.bin, -w, /tmp/graph14722025642112166404.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph14722025642112166404.bin, -l, -1, -v, -w, /tmp/graph14722025642112166404.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-11 15:14:46] [INFO ] Decomposing Gal with order
[2021-05-11 15:14:46] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-11 15:14:46] [INFO ] Removed a total of 51 redundant transitions.
[2021-05-11 15:14:46] [INFO ] Flatten gal took : 10 ms
[2021-05-11 15:14:46] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 1 ms.
[2021-05-11 15:14:46] [INFO ] Time to serialize gal into /tmp/CTLCardinality18264045631562058065.gal : 20 ms
[2021-05-11 15:14:46] [INFO ] Time to serialize properties into /tmp/CTLCardinality8986329306034492633.ctl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality18264045631562058065.gal, -t, CGAL, -ctl, /tmp/CTLCardinality8986329306034492633.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality18264045631562058065.gal -t CGAL -ctl /tmp/CTLCardinality8986329306034492633.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
Applied a total of 0 rules in 2 ms. Remains 39 /39 variables (removed 0) and now considering 64/64 (removed 0) transitions.
[2021-05-11 15:15:16] [INFO ] Flatten gal took : 4 ms
[2021-05-11 15:15:16] [INFO ] Flatten gal took : 4 ms
[2021-05-11 15:15:16] [INFO ] Input system was already deterministic with 64 transitions.
[2021-05-11 15:15:16] [INFO ] Flatten gal took : 4 ms
[2021-05-11 15:15:16] [INFO ] Flatten gal took : 3 ms
[2021-05-11 15:15:16] [INFO ] Time to serialize gal into /tmp/CTLCardinality8096428612392068837.gal : 1 ms
[2021-05-11 15:15:16] [INFO ] Time to serialize properties into /tmp/CTLCardinality3256236001326716983.ctl : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality8096428612392068837.gal, -t, CGAL, -ctl, /tmp/CTLCardinality3256236001326716983.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality8096428612392068837.gal -t CGAL -ctl /tmp/CTLCardinality3256236001326716983.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-11 15:15:46] [INFO ] Flatten gal took : 3 ms
[2021-05-11 15:15:46] [INFO ] Applying decomposition
[2021-05-11 15:15:46] [INFO ] Flatten gal took : 8 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph4208618984184612632.txt, -o, /tmp/graph4208618984184612632.bin, -w, /tmp/graph4208618984184612632.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph4208618984184612632.bin, -l, -1, -v, -w, /tmp/graph4208618984184612632.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-11 15:15:46] [INFO ] Decomposing Gal with order
[2021-05-11 15:15:46] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-11 15:15:46] [INFO ] Removed a total of 40 redundant transitions.
[2021-05-11 15:15:46] [INFO ] Flatten gal took : 11 ms
[2021-05-11 15:15:46] [INFO ] Fuse similar labels procedure discarded/fused a total of 10 labels/synchronizations in 1 ms.
[2021-05-11 15:15:46] [INFO ] Time to serialize gal into /tmp/CTLCardinality18072499991318978493.gal : 2 ms
[2021-05-11 15:15:46] [INFO ] Time to serialize properties into /tmp/CTLCardinality6846167694087960831.ctl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality18072499991318978493.gal, -t, CGAL, -ctl, /tmp/CTLCardinality6846167694087960831.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality18072499991318978493.gal -t CGAL -ctl /tmp/CTLCardinality6846167694087960831.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.1 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 7 Post agglomeration using F-continuation condition.Transition count delta: 7
Deduced a syphon composed of 7 places in 0 ms
Reduce places removed 7 places and 0 transitions.
Iterating global reduction 0 with 14 rules applied. Total rules applied 15 place count 31 transition count 57
Performed 1 Post agglomeration using F-continuation condition.Transition count delta: 0
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 0 with 2 rules applied. Total rules applied 17 place count 30 transition count 57
Drop transitions removed 1 transitions
Redundant transition composition rules discarded 1 transitions
Iterating global reduction 0 with 1 rules applied. Total rules applied 18 place count 30 transition count 56
Applied a total of 18 rules in 7 ms. Remains 30 /39 variables (removed 9) and now considering 56/64 (removed 8) transitions.
[2021-05-11 15:16:16] [INFO ] Flatten gal took : 2 ms
[2021-05-11 15:16:16] [INFO ] Flatten gal took : 5 ms
[2021-05-11 15:16:16] [INFO ] Input system was already deterministic with 56 transitions.
[2021-05-11 15:16:16] [INFO ] Flatten gal took : 2 ms
[2021-05-11 15:16:16] [INFO ] Flatten gal took : 3 ms
[2021-05-11 15:16:16] [INFO ] Time to serialize gal into /tmp/CTLCardinality1917849961562812999.gal : 1 ms
[2021-05-11 15:16:16] [INFO ] Time to serialize properties into /tmp/CTLCardinality2106157732631692082.ctl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality1917849961562812999.gal, -t, CGAL, -ctl, /tmp/CTLCardinality2106157732631692082.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality1917849961562812999.gal -t CGAL -ctl /tmp/CTLCardinality2106157732631692082.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-11 15:16:46] [INFO ] Flatten gal took : 3 ms
[2021-05-11 15:16:46] [INFO ] Applying decomposition
[2021-05-11 15:16:46] [INFO ] Flatten gal took : 3 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph17943040226257334268.txt, -o, /tmp/graph17943040226257334268.bin, -w, /tmp/graph17943040226257334268.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph17943040226257334268.bin, -l, -1, -v, -w, /tmp/graph17943040226257334268.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-11 15:16:46] [INFO ] Decomposing Gal with order
[2021-05-11 15:16:46] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-11 15:16:46] [INFO ] Removed a total of 41 redundant transitions.
[2021-05-11 15:16:46] [INFO ] Flatten gal took : 6 ms
[2021-05-11 15:16:46] [INFO ] Fuse similar labels procedure discarded/fused a total of 6 labels/synchronizations in 1 ms.
[2021-05-11 15:16:46] [INFO ] Time to serialize gal into /tmp/CTLCardinality8598172699636637059.gal : 21 ms
[2021-05-11 15:16:46] [INFO ] Time to serialize properties into /tmp/CTLCardinality2927357357795825862.ctl : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality8598172699636637059.gal, -t, CGAL, -ctl, /tmp/CTLCardinality2927357357795825862.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality8598172699636637059.gal -t CGAL -ctl /tmp/CTLCardinality2927357357795825862.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.1 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 1 Post agglomeration using F-continuation condition.Transition count delta: 0
Deduced a syphon composed of 1 places in 1 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 0 with 2 rules applied. Total rules applied 3 place count 37 transition count 64
Partial Post-agglomeration rule applied 2 times.
Drop transitions removed 2 transitions
Iterating global reduction 0 with 2 rules applied. Total rules applied 5 place count 37 transition count 64
Applied a total of 5 rules in 14 ms. Remains 37 /39 variables (removed 2) and now considering 64/64 (removed 0) transitions.
[2021-05-11 15:17:16] [INFO ] Flatten gal took : 3 ms
[2021-05-11 15:17:16] [INFO ] Flatten gal took : 3 ms
[2021-05-11 15:17:16] [INFO ] Input system was already deterministic with 64 transitions.
[2021-05-11 15:17:16] [INFO ] Flatten gal took : 3 ms
[2021-05-11 15:17:16] [INFO ] Flatten gal took : 7 ms
[2021-05-11 15:17:16] [INFO ] Time to serialize gal into /tmp/CTLCardinality1112561418221395905.gal : 0 ms
[2021-05-11 15:17:16] [INFO ] Time to serialize properties into /tmp/CTLCardinality5905914466929233791.ctl : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality1112561418221395905.gal, -t, CGAL, -ctl, /tmp/CTLCardinality5905914466929233791.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality1112561418221395905.gal -t CGAL -ctl /tmp/CTLCardinality5905914466929233791.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-11 15:17:47] [INFO ] Flatten gal took : 3 ms
[2021-05-11 15:17:47] [INFO ] Applying decomposition
[2021-05-11 15:17:47] [INFO ] Flatten gal took : 13 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph2470464614358039269.txt, -o, /tmp/graph2470464614358039269.bin, -w, /tmp/graph2470464614358039269.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph2470464614358039269.bin, -l, -1, -v, -w, /tmp/graph2470464614358039269.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-11 15:17:47] [INFO ] Decomposing Gal with order
[2021-05-11 15:17:47] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-11 15:17:47] [INFO ] Removed a total of 42 redundant transitions.
[2021-05-11 15:17:47] [INFO ] Flatten gal took : 7 ms
[2021-05-11 15:17:47] [INFO ] Fuse similar labels procedure discarded/fused a total of 4 labels/synchronizations in 2 ms.
[2021-05-11 15:17:47] [INFO ] Time to serialize gal into /tmp/CTLCardinality1765509437024362685.gal : 1 ms
[2021-05-11 15:17:47] [INFO ] Time to serialize properties into /tmp/CTLCardinality11042237429798913602.ctl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality1765509437024362685.gal, -t, CGAL, -ctl, /tmp/CTLCardinality11042237429798913602.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality1765509437024362685.gal -t CGAL -ctl /tmp/CTLCardinality11042237429798913602.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 1 CTL formulae.
Detected timeout of ITS tools.
[2021-05-11 15:18:17] [INFO ] Initial state reduction rules for CTL removed 1 formulas.
[2021-05-11 15:18:17] [INFO ] Flatten gal took : 5 ms
FORMULA Angiogenesis-PT-50-CTLCardinality-08 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2021-05-11 15:18:17] [INFO ] Flatten gal took : 4 ms
[2021-05-11 15:18:17] [INFO ] Applying decomposition
[2021-05-11 15:18:17] [INFO ] Flatten gal took : 3 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/convert-linux64, -i, /tmp/graph1517050671949594074.txt, -o, /tmp/graph1517050671949594074.bin, -w, /tmp/graph1517050671949594074.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202104292328/bin/louvain-linux64, /tmp/graph1517050671949594074.bin, -l, -1, -v, -w, /tmp/graph1517050671949594074.weights, -q, 0, -e, 0.001], workingDir=null]
[2021-05-11 15:18:17] [INFO ] Decomposing Gal with order
[2021-05-11 15:18:17] [INFO ] Rewriting arrays to variables to allow decomposition.
[2021-05-11 15:18:17] [INFO ] Removed a total of 45 redundant transitions.
[2021-05-11 15:18:17] [INFO ] Flatten gal took : 12 ms
[2021-05-11 15:18:17] [INFO ] Fuse similar labels procedure discarded/fused a total of 10 labels/synchronizations in 1 ms.
[2021-05-11 15:18:17] [INFO ] Time to serialize gal into /tmp/CTLCardinality11756096121769281529.gal : 1 ms
[2021-05-11 15:18:17] [INFO ] Time to serialize properties into /tmp/CTLCardinality15276601292447653639.ctl : 2 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality11756096121769281529.gal, -t, CGAL, -ctl, /tmp/CTLCardinality15276601292447653639.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality11756096121769281529.gal -t CGAL -ctl /tmp/CTLCardinality15276601292447653639.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 15 CTL formulae.
Detected timeout of ITS tools.
[2021-05-11 15:39:58] [INFO ] Flatten gal took : 122 ms
[2021-05-11 15:39:58] [INFO ] Time to serialize gal into /tmp/CTLCardinality12873371064527518584.gal : 12 ms
[2021-05-11 15:39:58] [INFO ] Time to serialize properties into /tmp/CTLCardinality11612004384811213905.ctl : 9 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality12873371064527518584.gal, -t, CGAL, -ctl, /tmp/CTLCardinality11612004384811213905.ctl, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality12873371064527518584.gal -t CGAL -ctl /tmp/CTLCardinality11612004384811213905.ctl --gen-order FOLLOW
No direction supplied, using forward translation only.
Parsed 15 CTL formulae.
Detected timeout of ITS tools.
[2021-05-11 16:01:39] [INFO ] Flatten gal took : 18 ms
[2021-05-11 16:01:39] [INFO ] Input system was already deterministic with 64 transitions.
[2021-05-11 16:01:39] [INFO ] Transformed 39 places.
[2021-05-11 16:01:39] [INFO ] Transformed 64 transitions.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit/bin//..//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit/bin//..//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2021-05-11 16:01:39] [INFO ] Time to serialize gal into /tmp/CTLCardinality5991475145807604530.gal : 1 ms
[2021-05-11 16:01:39] [INFO ] Time to serialize properties into /tmp/CTLCardinality5134626235186070362.ctl : 4 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /tmp/CTLCardinality5991475145807604530.gal, -t, CGAL, -ctl, /tmp/CTLCardinality5134626235186070362.ctl, --load-order, /home/mcc/execution/model.ord, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202104292328/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /tmp/CTLCardinality5991475145807604530.gal -t CGAL -ctl /tmp/CTLCardinality5134626235186070362.ctl --load-order /home/mcc/execution/model.ord --gen-order FOLLOW
Successfully loaded order from file /home/mcc/execution/model.ord
No direction supplied, using forward translation only.
Parsed 15 CTL formulae.

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution CTLCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ cut -d . -f 9
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202104292328.jar
+ VERSION=0
+ echo 'Running Version 0'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLCardinality -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-50"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is Angiogenesis-PT-50, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r007-tall-162037989900363"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-50.tgz
mv Angiogenesis-PT-50 execution
cd execution
if [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "UpperBounds" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] || [ "CTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;