Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2021-input.r003-tall-162037984500345.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2021-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool gspn
Input is Angiogenesis-PT-20, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r003-tall-162037984500345
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 388K
-rw-r--r-- 1 mcc users 17K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 112K May 5 16:58 CTLCardinality.xml
-rw-r--r-- 1 mcc users 8.2K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 79K May 5 16:58 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K May 6 14:48 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.7K Apr 26 07:40 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K Apr 26 07:40 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K Apr 26 07:40 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Apr 26 07:40 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K Mar 23 01:45 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 16K Mar 23 01:45 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.4K Mar 22 10:14 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 14K Mar 22 10:14 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Mar 22 09:09 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Mar 22 09:09 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 5 16:51 equiv_col
-rw-r--r-- 1 mcc users 3 May 5 16:51 instance
-rw-r--r-- 1 mcc users 6 May 5 16:51 iscolored
-rw-r--r-- 1 mcc users 33K May 5 16:51 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-20-00
FORMULA_NAME Angiogenesis-PT-20-01
FORMULA_NAME Angiogenesis-PT-20-02
FORMULA_NAME Angiogenesis-PT-20-03
FORMULA_NAME Angiogenesis-PT-20-04
FORMULA_NAME Angiogenesis-PT-20-05
FORMULA_NAME Angiogenesis-PT-20-06
FORMULA_NAME Angiogenesis-PT-20-07
FORMULA_NAME Angiogenesis-PT-20-08
FORMULA_NAME Angiogenesis-PT-20-09
FORMULA_NAME Angiogenesis-PT-20-10
FORMULA_NAME Angiogenesis-PT-20-11
FORMULA_NAME Angiogenesis-PT-20-12
FORMULA_NAME Angiogenesis-PT-20-13
FORMULA_NAME Angiogenesis-PT-20-14
FORMULA_NAME Angiogenesis-PT-20-15

=== Now, execution of the tool begins

BK_START 1620478620856

----------------------------------------------------------------------
GreatSPN-meddly tool, MCC 2021
----------------------------------------------------------------------

Running Angiogenesis-PT-20

IS_COLORED=
IS_NUPN=

LOADING PETRI NET FILE /home/mcc/execution/model.pnml (PNML) ...
PNML VERSION 2009, P/T NET.
COLOR CLASSES: 0
CONSTANTS: 0
PLACES: 39
TRANSITIONS: 64
COLOR VARS: 0
MEASURES: 0
LOADING TIME: [User 0.001s, Sys 0.000s]


SAVING FILE /home/mcc/execution/model (.net / .def) ...
EXPORT TIME: [User 0.000s, Sys 0.000s]


----------------------------------------------------------------------
GreatSPN/Meddly.
Copyright (C) 1987-2020, University of Torino, Italy.

Based on MEDDLY version 0.16.0
Copyright (C) 2009, Iowa State University Research Foundation, Inc.
website: http://meddly.sourceforge.net

Process ID: 427
MODEL NAME: /home/mcc/execution/model
39 places, 64 transitions.

Creating all event NSFs..
Creating all event NSFs..
Creating all event NSFs..
Creating all event NSFs..
Split: SplitSubtract
Start RS construction.
Split: SplitSubtract
Start RS construction.
Split: SplitSubtract
Start RS construction.
Split: SplitSubtract
Start RS construction.
Building monolithic NSF...
FORMULA Angiogenesis-PT-20-06 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-20-05 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-20-01 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-20-09 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-20-04 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-20-12 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-20-00 CANNOT_COMPUTE
FORMULA Angiogenesis-PT-20-02 CANNOT_COMPUTE
FORMULA Angiogenesis-PT-20-03 CANNOT_COMPUTE
FORMULA Angiogenesis-PT-20-07 CANNOT_COMPUTE
FORMULA Angiogenesis-PT-20-08 CANNOT_COMPUTE
FORMULA Angiogenesis-PT-20-10 CANNOT_COMPUTE
FORMULA Angiogenesis-PT-20-11 CANNOT_COMPUTE
FORMULA Angiogenesis-PT-20-13 CANNOT_COMPUTE
FORMULA Angiogenesis-PT-20-14 CANNOT_COMPUTE
FORMULA Angiogenesis-PT-20-15 CANNOT_COMPUTE
Ok.
EXITCODE: 0
----------------------------------------------------------------------

BK_STOP 1620480548774

--------------------
content from stderr:

May 08, 2021 12:57:01 PM com.sun.xml.bind.v2.runtime.reflect.opt.AccessorInjector
INFO: The optimized code generation is disabled
MEDDLY ERROR: Insufficient memory

MEDDLY ERROR: Insufficient memory

MEDDLY ERROR: Insufficient memory

MEDDLY ERROR: Insufficient memory

MEDDLY ERROR: Insufficient memory

MEDDLY ERROR: Insufficient memory

MEDDLY ERROR: Insufficient memory

MEDDLY ERROR: Insufficient memory

MEDDLY ERROR: Insufficient memory

MEDDLY ERROR: Insufficient memory

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-20"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="gspn"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool gspn"
echo " Input is Angiogenesis-PT-20, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r003-tall-162037984500345"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-20.tgz
mv Angiogenesis-PT-20 execution
cd execution
if [ "LTLCardinality" = "ReachabilityDeadlock" ] || [ "LTLCardinality" = "UpperBounds" ] || [ "LTLCardinality" = "QuasiLiveness" ] || [ "LTLCardinality" = "StableMarking" ] || [ "LTLCardinality" = "Liveness" ] || [ "LTLCardinality" = "OneSafe" ] || [ "LTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "LTLCardinality" = "ReachabilityDeadlock" ] || [ "LTLCardinality" = "QuasiLiveness" ] || [ "LTLCardinality" = "StableMarking" ] || [ "LTLCardinality" = "Liveness" ] || [ "LTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME LTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;