Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2021-input.r003-tall-162037984400314.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2021-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
..................
=====================================================================
Generated by BenchKit 2-4028
Executing tool gspn
Input is Angiogenesis-PT-01, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r003-tall-162037984400314
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 500K
-rw-r--r-- 1 mcc users 25K May 5 16:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 175K May 5 16:58 CTLCardinality.xml
-rw-r--r-- 1 mcc users 11K May 5 16:58 CTLFireability.txt
-rw-r--r-- 1 mcc users 106K May 5 16:58 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 6 14:48 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K May 6 14:48 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.2K Apr 26 07:40 LTLCardinality.txt
-rw-r--r-- 1 mcc users 29K Apr 26 07:40 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K Apr 26 07:40 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Apr 26 07:40 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.3K Mar 23 01:45 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 14K Mar 23 01:45 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.6K Mar 22 10:14 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 16K Mar 22 10:14 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Mar 22 09:09 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Mar 22 09:09 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 5 16:51 equiv_col
-rw-r--r-- 1 mcc users 3 May 5 16:51 instance
-rw-r--r-- 1 mcc users 6 May 5 16:51 iscolored
-rw-r--r-- 1 mcc users 34K May 5 16:51 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-01-00
FORMULA_NAME Angiogenesis-PT-01-01
FORMULA_NAME Angiogenesis-PT-01-02
FORMULA_NAME Angiogenesis-PT-01-03
FORMULA_NAME Angiogenesis-PT-01-04
FORMULA_NAME Angiogenesis-PT-01-05
FORMULA_NAME Angiogenesis-PT-01-06
FORMULA_NAME Angiogenesis-PT-01-07
FORMULA_NAME Angiogenesis-PT-01-08
FORMULA_NAME Angiogenesis-PT-01-09
FORMULA_NAME Angiogenesis-PT-01-10
FORMULA_NAME Angiogenesis-PT-01-11
FORMULA_NAME Angiogenesis-PT-01-12
FORMULA_NAME Angiogenesis-PT-01-13
FORMULA_NAME Angiogenesis-PT-01-14
FORMULA_NAME Angiogenesis-PT-01-15

=== Now, execution of the tool begins

BK_START 1620477339913

----------------------------------------------------------------------
GreatSPN-meddly tool, MCC 2021
----------------------------------------------------------------------

Running Angiogenesis-PT-01

IS_COLORED=
IS_NUPN=1

LOADING model.pnml ...
MODEL CLASS: P/T NET WITH NUPN EXTENSION
PLACES: 39
TRANSITIONS: 64
CONSTANTS: 0
TEMPLATE VARS: 0
ARCS: 185
NUPN UNITS: 9
LOADING TIME: 0.222

SAVING AS /home/mcc/execution/model.(net/def) ...
SAVING TIME: 0.014
SAVING NAME MAP FILE /home/mcc/execution/model.id2name ...
SAVING NUPN UNITS AS FILE /home/mcc/execution/model.nu ...
TOTAL TIME: 0.519
OK.
----------------------------------------------------------------------
GreatSPN/Meddly.
Copyright (C) 1987-2020, University of Torino, Italy.

Based on MEDDLY version 0.16.0
Copyright (C) 2009, Iowa State University Research Foundation, Inc.
website: http://meddly.sourceforge.net

Process ID: 454
MODEL NAME: /home/mcc/execution/model
39 places, 64 transitions.

Creating all event NSFs..
Creating all event NSFs..
Creating all event NSFs..
Split: SplitSubtract
Start RS construction.
Split: SplitSubtract
Start RS construction.
Split: SplitSubtract
Start RS construction.
Creating all event NSFs..
Building monolithic NSF...
FORMULA Angiogenesis-PT-01-02 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-00 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-03 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-05 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-04 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-01 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-06 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-07 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-08 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-09 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-10 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-12 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-11 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-15 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-14 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-01-13 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
Ok.
EXITCODE: 0
----------------------------------------------------------------------

BK_STOP 1620477341777

--------------------
content from stderr:

May 08, 2021 12:35:41 PM com.sun.xml.bind.v2.runtime.reflect.opt.AccessorInjector
INFO: The optimized code generation is disabled

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-01"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="gspn"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool gspn"
echo " Input is Angiogenesis-PT-01, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r003-tall-162037984400314"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-01.tgz
mv Angiogenesis-PT-01 execution
cd execution
if [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "UpperBounds" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] || [ "LTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME LTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;