Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fko/mcc2020-input.r227-oct2-159033546800552.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fko/mcc2020-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.......................................................................................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is ViralEpidemic-PT-S04D1C1A06, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r227-oct2-159033546800552
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 36M
-rw-r--r-- 1 mcc users 4.3K May 14 05:20 CTLCardinality.txt
-rw-r--r-- 1 mcc users 20K May 14 05:20 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.2K May 13 23:20 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 13 23:20 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 14 10:07 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K May 14 10:07 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 14 10:07 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 14 10:07 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 12 20:42 NewModel
-rw-r--r-- 1 mcc users 3.9K May 13 16:24 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 16K May 13 16:24 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 3.1K May 13 12:09 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K May 13 12:09 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K May 13 16:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K May 13 16:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 12 20:42 equiv_col
-rw-r--r-- 1 mcc users 11 May 12 20:42 instance
-rw-r--r-- 1 mcc users 6 May 12 20:42 iscolored
-rw-r--r-- 1 mcc users 35M May 12 20:42 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1590507425412

[2020-05-26 15:37:06] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-26 15:37:06] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-26 15:37:07] [INFO ] Load time of PNML (sax parser for PT used): 960 ms
[2020-05-26 15:37:07] [INFO ] Transformed 32767 places.
[2020-05-26 15:37:07] [INFO ] Transformed 49149 transitions.
[2020-05-26 15:37:07] [INFO ] Parsed PT model containing 32767 places and 49149 transitions in 1168 ms.
[2020-05-26 15:37:10] [INFO ] Flatten gal took : 1780 ms
[2020-05-26 15:37:11] [INFO ] Applying decomposition
[2020-05-26 15:37:12] [INFO ] Flatten gal took : 1438 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph9602240503079146772.txt, -o, /tmp/graph9602240503079146772.bin, -w, /tmp/graph9602240503079146772.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph9602240503079146772.bin, -l, -1, -v, -w, /tmp/graph9602240503079146772.weights, -q, 0, -e, 0.001], workingDir=null]
[2020-05-26 15:37:17] [INFO ] Decomposing Gal with order
[2020-05-26 15:37:30] [INFO ] Rewriting arrays to variables to allow decomposition.
[2020-05-26 15:47:12] [INFO ] Removed a total of 54891 redundant transitions.
[2020-05-26 15:47:13] [INFO ] Flatten gal took : 5212 ms
[2020-05-26 15:47:25] [INFO ] Fuse similar labels procedure discarded/fused a total of 38885 labels/synchronizations in 11157 ms.
[2020-05-26 15:47:26] [INFO ] Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 458 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats
built 11395 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 181 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 136 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 136 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 136 ordering constraints for composite.
built 53 ordering constraints for composite.
built 28 ordering constraints for composite.
built 13 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 30 ordering constraints for composite.
built 15 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 55 ordering constraints for composite.
built 30 ordering constraints for composite.
built 13 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 31 ordering constraints for composite.
built 15 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 93 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 93 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 136 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 64 ordering constraints for composite.
built 29 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 13 ordering constraints for composite.
built 41 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 179 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 181 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 52 ordering constraints for composite.
built 28 ordering constraints for composite.
built 13 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 30 ordering constraints for composite.
built 15 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 179 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 55 ordering constraints for composite.
built 31 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 15 ordering constraints for composite.
built 11 ordering constraints for composite.
built 30 ordering constraints for composite.
built 13 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 11 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 136 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 179 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 179 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 93 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
built 43 ordering constraints for composite.
ITS-tools command line returned an error code 137
[2020-05-26 16:00:34] [INFO ] Flatten gal took : 19886 ms
[2020-05-26 16:00:35] [INFO ] Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 389 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats --gen-order FOLLOW
Detected timeout of ITS tools.
[2020-05-26 16:20:39] [INFO ] Flatten gal took : 2299 ms
[2020-05-26 16:20:49] [INFO ] Input system was already deterministic with 49149 transitions.
[2020-05-26 16:20:53] [INFO ] Transformed 32767 places.
[2020-05-26 16:20:54] [INFO ] Transformed 49149 transitions.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2020-05-26 16:21:18] [INFO ] Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 169 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats, --load-order, /home/mcc/execution/model.ord, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats --load-order /home/mcc/execution/model.ord --gen-order FOLLOW
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution StateSpace -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S04D1C1A06"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is ViralEpidemic-PT-S04D1C1A06, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r227-oct2-159033546800552"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S04D1C1A06.tgz
mv ViralEpidemic-PT-S04D1C1A06 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;