Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/data/fko/mcc2020-input.r156-oct2-158972914300579.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fko/mcc2020-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.......................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is SharedMemory-PT-000100, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r156-oct2-158972914300579
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 59M
-rw-r--r-- 1 mcc users 2.5M Apr 27 15:14 CTLCardinality.txt
-rw-r--r-- 1 mcc users 6.2M Apr 27 15:14 CTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8M Apr 27 15:14 CTLFireability.txt
-rw-r--r-- 1 mcc users 5.0M Apr 27 15:14 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 27 15:14 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.1K Apr 27 15:14 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 646K Apr 27 15:14 LTLCardinality.txt
-rw-r--r-- 1 mcc users 1.8M Apr 28 14:02 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3M Apr 27 15:14 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.1M Apr 28 14:02 LTLFireability.xml
-rw-r--r-- 1 mcc users 1.1M Apr 27 15:14 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 2.6M Apr 27 15:14 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 3.2M Apr 27 15:14 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 9.1M Apr 27 15:14 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 13K Apr 27 15:14 UpperBounds.txt
-rw-r--r-- 1 mcc users 31K Apr 27 15:14 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Apr 27 15:14 equiv_col
-rw-r--r-- 1 mcc users 7 Apr 27 15:14 instance
-rw-r--r-- 1 mcc users 6 Apr 27 15:14 iscolored
-rw-r--r-- 1 mcc users 16M Apr 27 15:14 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-00
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-01
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-02
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-03
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-04
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-05
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-06
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-07
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-08
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-09
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-10
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-11
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-12
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-13
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-14
FORMULA_NAME SharedMemory-PT-000100-CTLCardinality-15

=== Now, execution of the tool begins

BK_START 1589913502501

[2020-05-19 18:38:24] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-19 18:38:24] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-19 18:38:25] [INFO ] Load time of PNML (sax parser for PT used): 816 ms
[2020-05-19 18:38:25] [INFO ] Transformed 10301 places.
[2020-05-19 18:38:25] [INFO ] Transformed 20100 transitions.
[2020-05-19 18:38:25] [INFO ] Found NUPN structural information;
[2020-05-19 18:38:25] [INFO ] Parsed PT model containing 10301 places and 20100 transitions in 1030 ms.
Parsed 16 properties from file /home/mcc/execution/CTLCardinality.xml in 3630 ms.
Interrupted random walk after 97759 steps, including 0 resets, run timeout after 30001 ms. (steps per millisecond=3 ) properties seen :[1, 1, 1, 0, 1, 0, 0, 0, 0, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 0, 0, 1, 1, 1, 1, 0]
// Phase 1: matrix 20100 rows 10301 cols
[2020-05-19 18:39:03] [INFO ] Computed 201 place invariants in 3429 ms
[2020-05-19 18:39:07] [INFO ] [Real]Absence check using 201 positive place invariants in 2970 ms returned sat
[2020-05-19 18:39:07] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-19 18:39:23] [INFO ] [Real]Absence check using state equation in 15466 ms returned (error "Solver has unexpectedly terminated")
[2020-05-19 18:39:25] [INFO ] [Real]Absence check using 201 positive place invariants in 1489 ms returned unsat
[2020-05-19 18:39:28] [INFO ] [Real]Absence check using 201 positive place invariants in 1865 ms returned unsat
[2020-05-19 18:39:33] [INFO ] [Real]Absence check using 201 positive place invariants in 3028 ms returned unsat
[2020-05-19 18:39:36] [INFO ] [Real]Absence check using 201 positive place invariants in 1478 ms returned unsat
[2020-05-19 18:39:40] [INFO ] [Real]Absence check using 201 positive place invariants in 1945 ms returned unsat
[2020-05-19 18:39:45] [INFO ] [Real]Absence check using 201 positive place invariants in 2833 ms returned sat
[2020-05-19 18:39:45] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-19 18:40:00] [INFO ] SMT solver returned unknown. Retrying;
[2020-05-19 18:40:00] [INFO ] [Real]Absence check using state equation in 15275 ms returned (error "Failed to check-sat")
[2020-05-19 18:40:06] [INFO ] [Real]Absence check using 201 positive place invariants in 3812 ms returned sat
[2020-05-19 18:40:06] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-19 18:40:20] [INFO ] SMT solver returned unknown. Retrying;
[2020-05-19 18:40:20] [INFO ] [Real]Absence check using state equation in 13904 ms returned (error "Failed to check-sat")
[2020-05-19 18:40:24] [INFO ] [Real]Absence check using 201 positive place invariants in 2742 ms returned sat
[2020-05-19 18:40:24] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-19 18:40:40] [INFO ] SMT solver returned unknown. Retrying;
[2020-05-19 18:40:40] [INFO ] [Real]Absence check using state equation in 16388 ms returned (error "Failed to check-sat")
Successfully simplified 5 atomic propositions for a total of 6 simplifications.
[2020-05-19 18:40:42] [INFO ] Initial state reduction rules for CTL removed 4 formulas.
[2020-05-19 18:40:43] [INFO ] Flatten gal took : 1856 ms
[2020-05-19 18:40:44] [INFO ] Initial state reduction rules for CTL removed 4 formulas.
[2020-05-19 18:40:44] [INFO ] Flatten gal took : 1083 ms
FORMULA SharedMemory-PT-000100-CTLCardinality-09 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA SharedMemory-PT-000100-CTLCardinality-07 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA SharedMemory-PT-000100-CTLCardinality-04 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA SharedMemory-PT-000100-CTLCardinality-03 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2020-05-19 18:40:46] [INFO ] Applying decomposition
[2020-05-19 18:40:47] [INFO ] Flatten gal took : 1141 ms
[2020-05-19 18:52:55] [WARNING] Could not apply decomposition. Using flat GAL structure.
java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph1854173447757324721.txt, -o, /tmp/graph1854173447757324721.bin, -w, /tmp/graph1854173447757324721.weights], workingDir=null] killed by timeout after 10 SECONDS
at fr.lip6.move.gal.process.Runner.waitForOrTimeout(Runner.java:76)
at fr.lip6.move.gal.process.Runner.runTool(Runner.java:47)
at fr.lip6.move.gal.process.Runner.runTool(Runner.java:27)
at fr.lip6.move.gal.louvain.GraphBuilder.convertGraphToBin(GraphBuilder.java:258)
at fr.lip6.move.gal.louvain.GraphBuilder.computeLouvain(GraphBuilder.java:189)
at fr.lip6.move.gal.louvain.GraphBuilder.computeLouvain(GraphBuilder.java:157)
at fr.lip6.move.gal.application.MccTranslator.applyOrder(MccTranslator.java:215)
at fr.lip6.move.gal.application.MccTranslator.flattenSpec(MccTranslator.java:266)
at fr.lip6.move.gal.application.Application.runMultiITS(Application.java:1135)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:345)
at fr.lip6.move.gal.application.Application.start(Application.java:154)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:43)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:137)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:107)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:400)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:660)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:597)
at org.eclipse.equinox.launcher.Main.run(Main.java:1468)
at org.eclipse.equinox.launcher.Main.main(Main.java:1441)
[2020-05-19 18:52:56] [INFO ] Time to serialize gal into /home/mcc/execution/CTLCardinality.pnml.gal : 1107 ms
Application raised an uncaught exception No space left on device
java.io.IOException: No space left on device
at java.base/java.io.FileOutputStream.writeBytes(Native Method)
at java.base/java.io.FileOutputStream.write(FileOutputStream.java:341)
at fr.lip6.move.serialization.SerializationUtil.serializePropertiesForITSCTLTools(SerializationUtil.java:179)
at fr.lip6.move.gal.application.ITSRunner.outputPropertyFile(ITSRunner.java:339)
at fr.lip6.move.gal.application.ITSRunner.configure(ITSRunner.java:78)
at fr.lip6.move.gal.application.Application.runMultiITS(Application.java:1140)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:345)
at fr.lip6.move.gal.application.Application.start(Application.java:154)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:43)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:137)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:107)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:400)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:660)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:597)
at org.eclipse.equinox.launcher.Main.run(Main.java:1468)
at org.eclipse.equinox.launcher.Main.main(Main.java:1441)
An exception occurred while writing to the platform log:
java.io.IOException: No space left on device
at java.base/java.io.FileOutputStream.writeBytes(Native Method)
at java.base/java.io.FileOutputStream.write(FileOutputStream.java:354)
at java.base/sun.nio.cs.StreamEncoder.writeBytes(StreamEncoder.java:233)
at java.base/sun.nio.cs.StreamEncoder.implFlushBuffer(StreamEncoder.java:312)
at java.base/sun.nio.cs.StreamEncoder.implFlush(StreamEncoder.java:316)
at java.base/sun.nio.cs.StreamEncoder.flush(StreamEncoder.java:153)
at java.base/java.io.OutputStreamWriter.flush(OutputStreamWriter.java:254)
at java.base/java.io.BufferedWriter.flush(BufferedWriter.java:257)
at org.eclipse.osgi.internal.log.EquinoxLogWriter.log(EquinoxLogWriter.java:304)
at org.eclipse.osgi.internal.log.EquinoxLogWriter.logged(EquinoxLogWriter.java:756)
at org.eclipse.osgi.internal.log.ExtendedLogReaderServiceFactory.safeLogged(ExtendedLogReaderServiceFactory.java:110)
at org.eclipse.osgi.internal.log.ExtendedLogReaderServiceFactory.logPrivileged(ExtendedLogReaderServiceFactory.java:253)
at org.eclipse.osgi.internal.log.ExtendedLogReaderServiceFactory.log(ExtendedLogReaderServiceFactory.java:225)
at org.eclipse.osgi.internal.log.ExtendedLogServiceFactory.log(ExtendedLogServiceFactory.java:97)
at org.eclipse.osgi.internal.log.LoggerImpl.log(LoggerImpl.java:88)
at org.eclipse.osgi.internal.log.LoggerImpl.log(LoggerImpl.java:80)
at org.eclipse.osgi.internal.log.LoggerImpl.log(LoggerImpl.java:76)
at org.eclipse.osgi.internal.log.EquinoxLogFactory$1.log(EquinoxLogFactory.java:65)
at org.eclipse.osgi.internal.log.EquinoxLogServices.log(EquinoxLogServices.java:158)
at org.eclipse.osgi.internal.log.EquinoxLogServices.log(EquinoxLogServices.java:154)
at org.eclipse.osgi.storage.Storage.close(Storage.java:486)
at org.eclipse.osgi.internal.framework.EquinoxContainer.close(EquinoxContainer.java:198)
at org.eclipse.osgi.internal.framework.EquinoxBundle$SystemBundle$EquinoxSystemModule.stopWorker(EquinoxBundle.java:204)
at org.eclipse.osgi.container.Module.doStop(Module.java:658)
at org.eclipse.osgi.container.Module.stop(Module.java:520)
at org.eclipse.osgi.container.SystemModule.stop(SystemModule.java:207)
at org.eclipse.osgi.internal.framework.EquinoxBundle$SystemBundle$EquinoxSystemModule$1.run(EquinoxBundle.java:220)
at java.base/java.lang.Thread.run(Thread.java:834)
Logging to the console instead.

!ENTRY org.eclipse.osgi 4 0 2020-05-19 18:52:58.231
!MESSAGE Error saving on shutdown
!STACK 0
java.io.IOException: No space left on device
at java.base/java.io.FileOutputStream.writeBytes(Native Method)
at java.base/java.io.FileOutputStream.write(FileOutputStream.java:354)
at org.eclipse.osgi.storagemanager.ManagedOutputStream.write(ManagedOutputStream.java:105)
at java.base/java.io.BufferedOutputStream.flushBuffer(BufferedOutputStream.java:81)
at java.base/java.io.BufferedOutputStream.write(BufferedOutputStream.java:127)
at java.base/java.io.DataOutputStream.writeLong(DataOutputStream.java:224)
at org.eclipse.osgi.storage.Storage.saveGenerations(Storage.java:1339)
at org.eclipse.osgi.storage.Storage.save0(Storage.java:1277)
at org.eclipse.osgi.storage.Storage.save(Storage.java:1246)
at org.eclipse.osgi.storage.Storage.close(Storage.java:484)
at org.eclipse.osgi.internal.framework.EquinoxContainer.close(EquinoxContainer.java:198)
at org.eclipse.osgi.internal.framework.EquinoxBundle$SystemBundle$EquinoxSystemModule.stopWorker(EquinoxBundle.java:204)
at org.eclipse.osgi.container.Module.doStop(Module.java:658)
at org.eclipse.osgi.container.Module.stop(Module.java:520)
at org.eclipse.osgi.container.SystemModule.stop(SystemModule.java:207)
at org.eclipse.osgi.internal.framework.EquinoxBundle$SystemBundle$EquinoxSystemModule$1.run(EquinoxBundle.java:220)
at java.base/java.lang.Thread.run(Thread.java:834)

BK_STOP 1589914511642

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="SharedMemory-PT-000100"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is SharedMemory-PT-000100, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r156-oct2-158972914300579"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/SharedMemory-PT-000100.tgz
mv SharedMemory-PT-000100 execution
cd execution
if [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "UpperBounds" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] || [ "CTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;