Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/mnt/tpsp/fkordon/mcc2020-input.r126-tajo-158961390600584.qcow2', fmt=qcow2 size=4294967296 backing_file='/mnt/tpsp/fkordon/mcc2020-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is PolyORBNT-COL-S05J60, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r126-tajo-158961390600584
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 268K
-rw-r--r-- 1 mcc users 3.5K Apr 12 06:01 CTLCardinality.txt
-rw-r--r-- 1 mcc users 17K Apr 12 06:01 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K Apr 11 05:48 CTLFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 11 05:48 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 24 05:37 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.8K Apr 14 12:46 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Apr 28 14:02 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K Apr 14 12:46 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K Apr 28 14:02 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.6K Apr 10 12:57 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 22K Apr 10 12:57 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 3.0K Apr 9 18:39 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 9 18:39 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Apr 10 22:23 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Apr 10 22:23 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Mar 24 05:37 equiv_pt
-rw-r--r-- 1 mcc users 7 Mar 24 05:37 instance
-rw-r--r-- 1 mcc users 5 Mar 24 05:37 iscolored
-rw-r--r-- 1 mcc users 94K Mar 24 05:37 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1589836200676

[2020-05-18 21:10:02] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-18 21:10:02] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-18 21:10:02] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".
SLF4J: Defaulting to no-operation (NOP) logger implementation
SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details.
[2020-05-18 21:10:03] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 606 ms
[2020-05-18 21:10:03] [INFO ] sort/places :
D4->place_482,
Threads->FetchJobB,QueueJobE,NotifyEventJobQueuedE,NotifyEventEndOfCheckSourcesE,NotifyEventEndOfCheckSourcesB,place_523,place_522,place_521,place_520,place_518,place_500,Check_Sources_E,Check_Sources_B,place_782,place_787,Perform_Work_E,Schedule_Task_B,Try_Check_Sources_E,Try_Check_Sources_B,
D5->Schedule_Task_E,
D6->CreatedJobs,
Jobs->f3,f2,f1,AvailableJobId,
Dot->block,mo3,mo2,mo1,mi3,mi2,mi1,cSources,place_462,place_460,place_458,place_456,CanInjectEvent,JobCnt,cJobCnt,
Sources->ModifiedSrc,DataOnSrc,TheSour,
D1->FetchJobE,QueueJobB,NotifyEventJobQueuedB,Perform_Work_B,

[2020-05-18 21:10:03] [INFO ] ms1 symmetric to ms3 in transition trans_489
[2020-05-18 21:10:03] [INFO ] ms3 symmetric to ms4 in transition trans_489
[2020-05-18 21:10:03] [INFO ] ms4 symmetric to ms2 in transition trans_489
[2020-05-18 21:10:03] [INFO ] ms1 symmetric to ms3 in transition trans_488
[2020-05-18 21:10:03] [INFO ] ms3 symmetric to ms2 in transition trans_488
[2020-05-18 21:10:03] [INFO ] ms1 symmetric to ms2 in transition trans_487
[2020-05-18 21:10:03] [INFO ] Imported 48 HL places and 38 HL transitions for a total of 969 PT places and 2152.0 transition bindings in 30 ms.
[2020-05-18 21:10:03] [INFO ] Computed order based on color domains.
[2020-05-18 21:10:03] [INFO ] Unfolded HLPN to a Petri net with 969 places and 1375 transitions in 29 ms.
[2020-05-18 21:10:03] [INFO ] Unfolded HLPN properties in 0 ms.
Deduced a syphon composed of 60 places in 8 ms
Reduce places removed 60 places and 60 transitions.
[2020-05-18 21:10:03] [INFO ] Flatten gal took : 151 ms
[2020-05-18 21:10:03] [INFO ] Applying decomposition
[2020-05-18 21:10:03] [INFO ] Flatten gal took : 115 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph12824793091266980370.txt, -o, /tmp/graph12824793091266980370.bin, -w, /tmp/graph12824793091266980370.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph12824793091266980370.bin, -l, -1, -v, -w, /tmp/graph12824793091266980370.weights, -q, 0, -e, 0.001], workingDir=null]
[2020-05-18 21:10:04] [INFO ] Decomposing Gal with order
[2020-05-18 21:10:04] [INFO ] Rewriting arrays to variables to allow decomposition.
[2020-05-18 21:10:04] [INFO ] Removed a total of 1619 redundant transitions.
[2020-05-18 21:10:04] [INFO ] Flatten gal took : 384 ms
[2020-05-18 21:10:04] [INFO ] Fuse similar labels procedure discarded/fused a total of 446 labels/synchronizations in 52 ms.
[2020-05-18 21:10:04] [INFO ] Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 30 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats
built 190 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 125 ordering constraints for composite.
built 5 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 193 ordering constraints for composite.
built 13 ordering constraints for composite.
built 16 ordering constraints for composite.
built 16 ordering constraints for composite.
built 13 ordering constraints for composite.
built 16 ordering constraints for composite.
built 16 ordering constraints for composite.
built 16 ordering constraints for composite.
built 17 ordering constraints for composite.
built 16 ordering constraints for composite.
built 16 ordering constraints for composite.
built 16 ordering constraints for composite.
built 16 ordering constraints for composite.
built 16 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 17 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
built 13 ordering constraints for composite.
Detected timeout of ITS tools.
[2020-05-18 21:30:06] [INFO ] Applying decomposition
[2020-05-18 21:30:07] [INFO ] Flatten gal took : 485 ms
[2020-05-18 21:30:07] [INFO ] Decomposing Gal with order
[2020-05-18 21:30:07] [INFO ] Rewriting arrays to variables to allow decomposition.
[2020-05-18 21:30:08] [INFO ] Removed a total of 4606 redundant transitions.
[2020-05-18 21:30:08] [INFO ] Flatten gal took : 552 ms
[2020-05-18 21:30:09] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 60 ms.
[2020-05-18 21:30:09] [INFO ] Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 130 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats
built 1204 ordering constraints for composite.
Detected timeout of ITS tools.
[2020-05-18 21:50:12] [INFO ] Flatten gal took : 1747 ms
[2020-05-18 21:50:15] [INFO ] Input system was already deterministic with 1315 transitions.
[2020-05-18 21:50:15] [INFO ] Transformed 909 places.
[2020-05-18 21:50:15] [INFO ] Transformed 1315 transitions.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2020-05-18 21:50:45] [INFO ] Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 24 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats, --load-order, /home/mcc/execution/model.ord, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats --load-order /home/mcc/execution/model.ord --gen-order FOLLOW
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution StateSpace -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBNT-COL-S05J60"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is PolyORBNT-COL-S05J60, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r126-tajo-158961390600584"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBNT-COL-S05J60.tgz
mv PolyORBNT-COL-S05J60 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;