Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/local/x2003239/mcc2020-input.r111-csrt-158961257300210.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2020-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
...........................................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is NeighborGrid-PT-d5n4m1t35, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r111-csrt-158961257300210
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 59M
-rw-r--r-- 1 mcc users 3.8K Apr 27 15:14 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K Apr 27 15:14 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.9K Apr 27 15:14 CTLFireability.txt
-rw-r--r-- 1 mcc users 13K Apr 27 15:14 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 27 15:14 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.1K Apr 27 15:14 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.4K Apr 27 15:14 LTLCardinality.txt
-rw-r--r-- 1 mcc users 28K Apr 28 14:01 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.9K Apr 27 15:14 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 28 14:01 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K Apr 27 15:14 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Apr 27 15:14 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 4.1K Apr 27 15:14 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K Apr 27 15:14 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Apr 27 15:14 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K Apr 27 15:14 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Apr 27 15:14 equiv_col
-rw-r--r-- 1 mcc users 10 Apr 27 15:14 instance
-rw-r--r-- 1 mcc users 6 Apr 27 15:14 iscolored
-rwxr-xr-x 1 mcc users 59M Apr 27 15:14 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-00
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-01
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-02
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-03
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-04
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-05
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-06
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-07
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-08
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-09
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-10
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-11
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-12
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-13
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-14
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-15

=== Now, execution of the tool begins

BK_START 1589841585311

[2020-05-18 22:39:47] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-18 22:39:47] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-18 22:39:50] [INFO ] Load time of PNML (sax parser for PT used): 2937 ms
[2020-05-18 22:39:50] [INFO ] Transformed 1024 places.
[2020-05-18 22:39:51] [INFO ] Transformed 196608 transitions.
[2020-05-18 22:39:51] [INFO ] Parsed PT model containing 1024 places and 196608 transitions in 3430 ms.
Parsed 16 properties from file /home/mcc/execution/LTLFireability.xml in 534 ms.
Working with output stream class java.io.PrintStream
Finished random walk after 4404 steps, including 0 resets, run visited all 43 properties in 26530 ms. (steps per millisecond=0 )
[2020-05-18 22:40:22] [INFO ] Initial state reduction rules for CTL removed 3 formulas.
[2020-05-18 22:40:23] [INFO ] Flatten gal took : 4291 ms
FORMULA NeighborGrid-PT-d5n4m1t35-15 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA NeighborGrid-PT-d5n4m1t35-14 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA NeighborGrid-PT-d5n4m1t35-01 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2020-05-18 22:40:26] [INFO ] Flatten gal took : 2629 ms
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
[2020-05-18 22:40:37] [INFO ] Applying decomposition
[2020-05-18 22:40:41] [INFO ] Flatten gal took : 4489 ms
[2020-05-18 22:40:42] [INFO ] Input system was already deterministic with 196608 transitions.
[2020-05-18 22:40:42] [INFO ] Too many transitions (196608) to apply POR reductions. Disabling POR matrices.
[2020-05-18 22:40:53] [INFO ] Built C files in 21353ms conformant to PINS in folder :/home/mcc/execution
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph5397559232956796421.txt, -o, /tmp/graph5397559232956796421.bin, -w, /tmp/graph5397559232956796421.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph5397559232956796421.bin, -l, -1, -v, -w, /tmp/graph5397559232956796421.weights, -q, 0, -e, 0.001], workingDir=null]
[2020-05-18 22:40:56] [INFO ] Decomposing Gal with order
[2020-05-18 22:40:56] [INFO ] Rewriting arrays to variables to allow decomposition.
[2020-05-18 22:42:50] [INFO ] Removed a total of 244672 redundant transitions.
[2020-05-18 22:42:53] [INFO ] Flatten gal took : 114672 ms
[2020-05-18 22:42:57] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 739 ms.
[2020-05-18 22:42:57] [INFO ] Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 587 ms
[2020-05-18 22:42:57] [INFO ] Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 6 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 13 LTL properties
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution] killed by timeout after 400 SECONDS
java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution] killed by timeout after 400 SECONDS
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:80)
at java.base/java.lang.Thread.run(Thread.java:834)
Checking formula 0 : !((!((X("(u2.p_2_3_0_2_0<1)"))U(X("(u0.p_0_1_3_2_1>=1)")))))
Formula 0 simplified : X"(u2.p_2_3_0_2_0<1)" U X"(u0.p_0_1_3_2_1>=1)"
built 6 ordering constraints for composite.
Detected timeout of ITS tools.
[2020-05-18 23:03:42] [INFO ] Flatten gal took : 9433 ms
[2020-05-18 23:03:43] [INFO ] Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 650 ms
[2020-05-18 23:03:43] [INFO ] Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 7 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock --gen-order FOLLOW
Read 13 LTL properties
Checking formula 0 : !((!((X("(p_2_3_0_2_0<1)"))U(X("(p_0_1_3_2_1>=1)")))))
Formula 0 simplified : X"(p_2_3_0_2_0<1)" U X"(p_0_1_3_2_1>=1)"
ITS-tools command line returned an error code 137
[2020-05-18 23:16:13] [INFO ] Flatten gal took : 4266 ms
[2020-05-18 23:16:24] [INFO ] Input system was already deterministic with 196608 transitions.
[2020-05-18 23:16:27] [INFO ] Transformed 1024 places.
[2020-05-18 23:16:28] [INFO ] Transformed 196608 transitions.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2020-05-18 23:17:06] [INFO ] Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 395 ms
[2020-05-18 23:17:06] [INFO ] Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 10 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock, --load-order, /home/mcc/execution/model.ord, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock --load-order /home/mcc/execution/model.ord --gen-order FOLLOW
Read 13 LTL properties
Successfully loaded order from file /home/mcc/execution/model.ord
Checking formula 0 : !((!((X("(p_2_3_0_2_0<1)"))U(X("(p_0_1_3_2_1>=1)")))))
Formula 0 simplified : X"(p_2_3_0_2_0<1)" U X"(p_0_1_3_2_1>=1)"
ITS-tools command line returned an error code 137

BK_STOP 1589844226444

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="NeighborGrid-PT-d5n4m1t35"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is NeighborGrid-PT-d5n4m1t35, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r111-csrt-158961257300210"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/NeighborGrid-PT-d5n4m1t35.tgz
mv NeighborGrid-PT-d5n4m1t35 execution
cd execution
if [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "UpperBounds" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] || [ "LTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME LTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;