Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/local/x2003239/mcc2020-input.r111-csrt-158961257100098.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2020-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
................................................................................................................................................................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is MAPKbis-PT-5320, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r111-csrt-158961257100098
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 376K
-rw-r--r-- 1 mcc users 4.6K Apr 27 15:14 CTLCardinality.txt
-rw-r--r-- 1 mcc users 23K Apr 27 15:14 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.8K Apr 27 15:14 CTLFireability.txt
-rw-r--r-- 1 mcc users 23K Apr 27 15:14 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 27 15:14 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K Apr 27 15:14 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.0K Apr 27 15:14 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K Apr 28 14:01 LTLCardinality.xml
-rw-r--r-- 1 mcc users 5.0K Apr 27 15:14 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K Apr 28 14:01 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Apr 27 15:14 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Apr 27 15:14 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 5.2K Apr 27 15:14 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K Apr 27 15:14 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Apr 27 15:14 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Apr 27 15:14 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Apr 27 15:14 equiv_col
-rw-r--r-- 1 mcc users 5 Apr 27 15:14 instance
-rw-r--r-- 1 mcc users 6 Apr 27 15:14 iscolored
-rw-r--r-- 1 mcc users 170K Apr 27 15:14 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5320-00
FORMULA_NAME MAPKbis-PT-5320-01
FORMULA_NAME MAPKbis-PT-5320-02
FORMULA_NAME MAPKbis-PT-5320-03
FORMULA_NAME MAPKbis-PT-5320-04
FORMULA_NAME MAPKbis-PT-5320-05
FORMULA_NAME MAPKbis-PT-5320-06
FORMULA_NAME MAPKbis-PT-5320-07
FORMULA_NAME MAPKbis-PT-5320-08
FORMULA_NAME MAPKbis-PT-5320-09
FORMULA_NAME MAPKbis-PT-5320-10
FORMULA_NAME MAPKbis-PT-5320-11
FORMULA_NAME MAPKbis-PT-5320-12
FORMULA_NAME MAPKbis-PT-5320-13
FORMULA_NAME MAPKbis-PT-5320-14
FORMULA_NAME MAPKbis-PT-5320-15

=== Now, execution of the tool begins

BK_START 1589827346558

[2020-05-18 18:42:28] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-18 18:42:28] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-18 18:42:28] [INFO ] Load time of PNML (sax parser for PT used): 68 ms
[2020-05-18 18:42:28] [INFO ] Transformed 106 places.
[2020-05-18 18:42:28] [INFO ] Transformed 173 transitions.
[2020-05-18 18:42:28] [INFO ] Found NUPN structural information;
[2020-05-18 18:42:28] [INFO ] Parsed PT model containing 106 places and 173 transitions in 114 ms.
Deduced a syphon composed of 29 places in 2 ms
Reduce places removed 33 places and 106 transitions.
Parsed 16 properties from file /home/mcc/execution/LTLFireability.xml in 20 ms.
Working with output stream class java.io.PrintStream
Finished random walk after 479 steps, including 15 resets, run visited all 9 properties in 18 ms. (steps per millisecond=26 )
[2020-05-18 18:42:29] [INFO ] Found a total of 25 fixed domain variables (out of 73 variables) in GAL type petri
[2020-05-18 18:42:29] [INFO ] Found a total of 25 constant array cells/variables (out of 73 variables) in type petri
[2020-05-18 18:42:29] [INFO ] GRB2_equals_0,SOS_equals_0,TAK1_equals_0,ERK_equals_0,MAP3K1_3_equals_0,p70_equals_0,PKC_equals_0,AKT_0,PLCG_equals_0,FRS2_equals_0,MEK1_2_equals_0,SMAD_equals_0,Proliferation_equals_0,FGFR3_equals_0,PI3K_equals_0,SPRY_equals_0,TGFBR_equals_0,PDK1_equals_0,RAS_equals_0,EGFR_equals_0,FOS_equals_0,GAB1_equals_0,BCL2_equals_0,RAF_equals_0,RSK_equals_0,
[2020-05-18 18:42:29] [INFO ] Removed 25 constant variables :GRB2_equals_0=1, SOS_equals_0=1, TAK1_equals_0=1, ERK_equals_0=1, MAP3K1_3_equals_0=1, p70_equals_0=1, PKC_equals_0=1, AKT_0=1, PLCG_equals_0=1, FRS2_equals_0=1, MEK1_2_equals_0=1, SMAD_equals_0=1, Proliferation_equals_0=1, FGFR3_equals_0=1, PI3K_equals_0=1, SPRY_equals_0=1, TGFBR_equals_0=1, PDK1_equals_0=1, RAS_equals_0=1, EGFR_equals_0=1, FOS_equals_0=1, GAB1_equals_0=1, BCL2_equals_0=1, RAF_equals_0=1, RSK_equals_0=1
[2020-05-18 18:42:29] [INFO ] Simplified 31 expressions due to constant valuations.
[2020-05-18 18:42:29] [INFO ] Initial state reduction rules for CTL removed 11 formulas.
[2020-05-18 18:42:29] [INFO ] Flatten gal took : 50 ms
FORMULA MAPKbis-PT-5320-13 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-12 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-11 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-10 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-09 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-08 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-07 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-04 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-03 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-02 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5320-00 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2020-05-18 18:42:29] [INFO ] Flatten gal took : 11 ms
Using solver Z3 to compute partial order matrices.
[2020-05-18 18:42:29] [INFO ] Applying decomposition
Built C files in :
/home/mcc/execution
[2020-05-18 18:42:29] [INFO ] Flatten gal took : 26 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph10134014541502528840.txt, -o, /tmp/graph10134014541502528840.bin, -w, /tmp/graph10134014541502528840.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph10134014541502528840.bin, -l, -1, -v, -w, /tmp/graph10134014541502528840.weights, -q, 0, -e, 0.001], workingDir=null]
[2020-05-18 18:42:29] [INFO ] Input system was already deterministic with 67 transitions.
[2020-05-18 18:42:29] [INFO ] Decomposing Gal with order
[2020-05-18 18:42:29] [INFO ] Rewriting arrays to variables to allow decomposition.
[2020-05-18 18:42:29] [INFO ] Removed a total of 86 redundant transitions.
[2020-05-18 18:42:29] [INFO ] Flatten gal took : 64 ms
[2020-05-18 18:42:29] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 2 ms.
[2020-05-18 18:42:29] [INFO ] Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 5 ms
[2020-05-18 18:42:29] [INFO ] Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
Normalized transition count is 47 out of 67 initially.
// Phase 1: matrix 47 rows 48 cols
its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 5 LTL properties
[2020-05-18 18:42:29] [INFO ] Computed 24 place invariants in 7 ms
inv : MTK1_equals_0 + MTK1_equals_1 = 1
inv : JNK_equals_0 + JNK_equals_1 = 1
inv : AP1_equals_0 + AP1_equals_1 = 1
inv : CREB_equals_0 + CREB_equals_1 = 1
inv : p14_equals_0 + p14_equals_1 = 1
inv : MSK_equals_0 + MSK_equals_1 = 1
inv : MYC_equals_0 + MYC_equals_1 = 1
inv : TAOK_equals_0 + TAOK_equals_1 = 1
inv : Apoptosis_equals_0 + Apoptosis_equals_1 = 1
inv : JUN_equals_0 + JUN_equals_1 = 1
inv : p53_equals_0 + p53_equals_1 = 1
inv : ATM_equals_0 + ATM_equals_1 = 1
inv : FOXO3_equals_0 + FOXO3_equals_1 = 1
inv : GADD45_equals_0 + GADD45_equals_1 = 1
inv : MAX_equals_0 + MAX_equals_1 = 1
inv : PTEN_equals_0 + PTEN_equals_1 = 1
inv : p38_equals_0 + p38_equals_1 = 1
inv : ELK1_equals_0 + ELK1_equals_1 = 1
inv : p21_equals_0 + p21_equals_1 = 1
inv : MDM2_equals_0 + MDM2_equals_1 = 1
inv : PPP2CA_equals_0 + PPP2CA_equals_1 = 1
inv : ATF2_equals_0 + ATF2_equals_1 = 1
inv : Growth_Arrest_equals_0 + Growth_Arrest_equals_1 = 1
inv : DUSP1_equals_0 + DUSP1_equals_1 = 1
Total of 24 invariants.
[2020-05-18 18:42:29] [INFO ] Computed 24 place invariants in 9 ms
Checking formula 0 : !((F(!(("((i3.u8.GADD45_equals_1!=1)||(i7.u23.p53_equals_0!=1))")U(X("((i3.u8.GADD45_equals_1==1)&&(i7.u23.p53_equals_0==1))"))))))
Formula 0 simplified : !F!("((i3.u8.GADD45_equals_1!=1)||(i7.u23.p53_equals_0!=1))" U X"((i3.u8.GADD45_equals_1==1)&&(i7.u23.p53_equals_0==1))")
built 14 ordering constraints for composite.
built 7 ordering constraints for composite.
built 6 ordering constraints for composite.
built 11 ordering constraints for composite.
built 9 ordering constraints for composite.
built 7 ordering constraints for composite.
built 9 ordering constraints for composite.
built 5 ordering constraints for composite.
built 9 ordering constraints for composite.
built 13 ordering constraints for composite.
built 3 ordering constraints for composite.
Reverse transition relation is NOT exact ! Due to transitions ATF2_equals_1_to_ATF2_equals_0_when_JNK_equals_0_and_p38_equals_0, Apoptosis_equals_1_to_Apoptosis_equals_0_when_p53_equals_0, ELK1_equals_1_to_ELK1_equals_0_when_ERK_equals_0_and_JNK_equals_0_and_p38_equals_0, FOXO3_equals_1_to_FOXO3_equals_0_when_JNK_equals_0, GADD45_equals_1_to_GADD45_equals_0_when_SMAD_equals_0_and_p53_equals_0, JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_0_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0, JUN_equals_1_to_JUN_equals_0_when_JNK_equals_0, MAX_equals_1_to_MAX_equals_0_when_p38_equals_0, MYC_equals_1_to_MYC_equals_0_when_MSK_equals_0, TAOK_equals_0_to_TAOK_equals_1_when_ATM_equals_1, p21_equals_1_to_p21_equals_0_when_p53_equals_0, p38_equals_1_to_p38_equals_0_when_DUSP1_equals_0_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0, p38_equals_1_to_p38_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0, p38_equals_1_to_p38_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAOK_equals_0, p53_equals_0_to_p53_equals_1_when_ATM_equals_1_and_p38_equals_1, i0.AP1_equals_1_to_AP1_equals_0_when_JUN_equals_0, i0.AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0, i1.Apoptosis_equals_1_to_Apoptosis_equals_0_when_FOXO3_equals_0, i3.MTK1_equals_1_to_MTK1_equals_0_when_GADD45_equals_0, i3.MTK1_equals_0_to_MTK1_equals_1_when_GADD45_equals_1, i4.p14_equals_1_to_p14_equals_0_when_MYC_equals_0, i4.MYC_equals_1_to_MYC_equals_0_when_AKT_equals_0_and_MAX_equals_0, i5.Growth_Arrest_equals_1_to_Growth_Arrest_equals_0_when_p21_equals_0, i6.MSK_equals_1_to_MSK_equals_0_when_ERK_equals_0_and_p38_equals_0, i6.DUSP1_equals_1_to_DUSP1_equals_0_when_CREB_equals_0, i6.i0.CREB_equals_1_to_CREB_equals_0_when_MSK_equals_0, i6.i1.PPP2CA_equals_1_to_PPP2CA_equals_0_when_p38_equals_0, i7.p53_equals_0_to_p53_equals_1_when_ATM_equals_1_and_MDM2_equals_0, i7.PTEN_equals_1_to_PTEN_equals_0_when_p53_equals_0, i7.MDM2_equals_1_to_MDM2_equals_0_when_AKT_equals_0_and_p53_equals_0, i7.u2.ATM_equals_0_to_ATM_equals_1_when_DNA_damage_equals_1, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :4/32/31/67
Computing Next relation with stutter on 1 deadlock states
10 unique states visited
[2020-05-18 18:42:29] [INFO ] Proved 48 variables to be positive in 194 ms
10 strongly connected components in search stack
11 transitions explored
10 items max in DFS search stack
11 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.153166,20192,1,0,6591,37,1007,12194,47,33,13165
an accepting run exists (use option '-e' to print it)
Formula 0 is FALSE accepting run found.
FORMULA MAPKbis-PT-5320-01 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 1 : !((F(X(F(!(F((X("((i7.u2.ATM_equals_1==1)&&(i2.u19.TAOK_equals_0==1))"))U("(((i7.u2.ATM_equals_1==1)&&(i7.u13.MDM2_equals_0==1))&&(i7.u23.p53_equals_0==1))"))))))))
Formula 1 simplified : !FXF!F(X"((i7.u2.ATM_equals_1==1)&&(i2.u19.TAOK_equals_0==1))" U "(((i7.u2.ATM_equals_1==1)&&(i7.u13.MDM2_equals_0==1))&&(i7.u23.p53_equals_0==1))")
Computing Next relation with stutter on 1 deadlock states
[2020-05-18 18:42:29] [INFO ] Computing symmetric may disable matrix : 67 transitions.
[2020-05-18 18:42:29] [INFO ] Computation of disable matrix completed :0/67 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-18 18:42:29] [INFO ] Computation of Complete disable matrix. took 3 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-18 18:42:29] [INFO ] Computing symmetric may enable matrix : 67 transitions.
[2020-05-18 18:42:29] [INFO ] Computation of Complete enable matrix. took 2 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-18 18:42:30] [INFO ] Computing symmetric co enabling matrix : 67 transitions.
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
197 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,2.11137,64512,1,0,74454,37,1055,148122,47,33,70756
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA MAPKbis-PT-5320-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 2 : !(((F(G("((((i6.i1.u5.DUSP1_equals_1==1)&&(i3.u15.MTK1_equals_1==1))&&(i2.u19.TAOK_equals_1==1))&&(i6.i1.u22.p38_equals_0==1))")))&&(!(X(F(X("((i3.u8.GADD45_equals_0==1)&&(i3.u15.MTK1_equals_1==1))")))))))
Formula 2 simplified : !(FG"((((i6.i1.u5.DUSP1_equals_1==1)&&(i3.u15.MTK1_equals_1==1))&&(i2.u19.TAOK_equals_1==1))&&(i6.i1.u22.p38_equals_0==1))" & !XFX"((i3.u8.GADD45_equals_0==1)&&(i3.u15.MTK1_equals_1==1))")
Computing Next relation with stutter on 1 deadlock states
5 unique states visited
5 strongly connected components in search stack
6 transitions explored
5 items max in DFS search stack
3 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,2.1504,66056,1,0,76781,37,1160,152190,48,33,76278
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA MAPKbis-PT-5320-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 3 : !((G(("((i1.u7.FOXO3_equals_1==1)&&(i2.u10.JNK_equals_0==1))")U(X("(((i6.i1.u17.PPP2CA_equals_0!=1)||(i6.i1.u22.p38_equals_1!=1))&&((i1.u7.FOXO3_equals_1!=1)||(i2.u10.JNK_equals_0!=1)))")))))
Formula 3 simplified : !G("((i1.u7.FOXO3_equals_1==1)&&(i2.u10.JNK_equals_0==1))" U X"(((i6.i1.u17.PPP2CA_equals_0!=1)||(i6.i1.u22.p38_equals_1!=1))&&((i1.u7.FOXO3_equals_1!=1)||(i2.u10.JNK_equals_0!=1)))")
Computing Next relation with stutter on 1 deadlock states
5 unique states visited
5 strongly connected components in search stack
6 transitions explored
5 items max in DFS search stack
1 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,2.16807,66732,1,0,77893,37,1184,154881,48,33,78318
an accepting run exists (use option '-e' to print it)
Formula 3 is FALSE accepting run found.
FORMULA MAPKbis-PT-5320-14 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 4 : !((F("(((i6.i1.u5.DUSP1_equals_0==1)&&(i2.u10.JNK_equals_0==1))&&(i2.u19.TAOK_equals_1==1))")))
Formula 4 simplified : !F"(((i6.i1.u5.DUSP1_equals_0==1)&&(i2.u10.JNK_equals_0==1))&&(i2.u19.TAOK_equals_1==1))"
Computing Next relation with stutter on 1 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
18 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,2.34705,72540,1,0,90448,37,1220,176361,48,33,93647
an accepting run exists (use option '-e' to print it)
Formula 4 is FALSE accepting run found.
FORMULA MAPKbis-PT-5320-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
[2020-05-18 18:42:31] [INFO ] Computation of Finished co-enabling matrix. took 1604 ms. Total solver calls (SAT/UNSAT): 643(271/372)
[2020-05-18 18:42:31] [INFO ] Computing Do-Not-Accords matrix : 67 transitions.
[2020-05-18 18:42:31] [INFO ] Computation of Completed DNA matrix. took 1 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-18 18:42:31] [INFO ] Built C files in 2696ms conformant to PINS in folder :/home/mcc/execution
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread was asked to interrupt. Dying gracefully.

BK_STOP 1589827352444

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5320"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is MAPKbis-PT-5320, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r111-csrt-158961257100098"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5320.tgz
mv MAPKbis-PT-5320 execution
cd execution
if [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "UpperBounds" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] || [ "LTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME LTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;