Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2020-input.r003-smll-158897508400361.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2020-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
....................
=====================================================================
Generated by BenchKit 2-4028
Executing tool smart
Input is Angiogenesis-PT-50, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r003-smll-158897508400361
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 216K
-rw-r--r-- 1 mcc users 4.5K Apr 28 14:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 23K Apr 28 14:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Apr 28 14:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 14K Apr 28 14:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 28 14:22 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.1K Apr 28 14:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Apr 28 14:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.0K Apr 28 14:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K Apr 28 14:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 28 14:22 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K Apr 28 14:22 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.5K Apr 28 14:22 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K Apr 28 14:22 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Apr 28 14:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Apr 28 14:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 equiv_col
-rw-r--r-- 1 mcc users 3 Apr 28 14:22 instance
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 iscolored
-rw-r--r-- 1 mcc users 33K Apr 28 14:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1589130579099

======================================================
========== this is Smart for the MCC'2018 ============
======================================================
Running Angiogenesis (PT), instance 50
Examination StateSpace
Parser /home/mcc/BenchKit/bin/parser/StateSpaceParse.jar
Model checker /home/mcc/BenchKit/bin/main/smart

Filename model.pnml
Petri model created: 39 places, 64 transitions, 185 arcs.
AT ITER 0 NEW BEST:: SOT 1596 SOS 760 HAS SOPS 760 HAS SOUS 597 HAS SOUPS 597 WITH SCORE 597.76
AT ITER 4 NEW BEST:: SOT 1586 SOS 755 HAS SOPS 755 HAS SOUS 594 HAS SOUPS 594 WITH SCORE 594.755
AT ITER 7 NEW BEST:: SOT 1574 SOS 831 HAS SOPS 831 HAS SOUS 579 HAS SOUPS 579 WITH SCORE 579.831
AT ITER 18 NEW BEST:: SOT 1566 SOS 827 HAS SOPS 827 HAS SOUS 571 HAS SOUPS 571 WITH SCORE 571.827
AT ITER 22 NEW BEST:: SOT 1565 SOS 827 HAS SOPS 827 HAS SOUS 570 HAS SOUPS 570 WITH SCORE 570.827
AT ITER 40 NEW BEST:: SOT 1540 SOS 836 HAS SOPS 836 HAS SOUS 551 HAS SOUPS 551 WITH SCORE 551.836
AT ITER 55 NEW BEST:: SOT 1543 SOS 818 HAS SOPS 818 HAS SOUS 548 HAS SOUPS 548 WITH SCORE 548.818
AT ITER 63 NEW BEST:: SOT 1539 SOS 806 HAS SOPS 806 HAS SOUS 548 HAS SOUPS 548 WITH SCORE 548.806
AT ITER 69 NEW BEST:: SOT 1539 SOS 760 HAS SOPS 760 HAS SOUS 547 HAS SOUPS 547 WITH SCORE 547.76
AT ITER 85 NEW BEST:: SOT 1538 SOS 758 HAS SOPS 758 HAS SOUS 545 HAS SOUPS 545 WITH SCORE 545.758
AT ITER 86 NEW BEST:: SOT 1519 SOS 742 HAS SOPS 742 HAS SOUS 510 HAS SOUPS 510 WITH SCORE 510.742
AT ITER 95 NEW BEST:: SOT 1514 SOS 737 HAS SOPS 737 HAS SOUS 504 HAS SOUPS 504 WITH SCORE 504.737
AT ITER 119 NEW BEST:: SOT 1510 SOS 733 HAS SOPS 733 HAS SOUS 496 HAS SOUPS 496 WITH SCORE 496.733
AT ITER 121 NEW BEST:: SOT 1508 SOS 755 HAS SOPS 755 HAS SOUS 495 HAS SOUPS 495 WITH SCORE 495.755
AT ITER 124 NEW BEST:: SOT 1508 SOS 755 HAS SOPS 755 HAS SOUS 494 HAS SOUPS 494 WITH SCORE 494.755
AT ITER 131 NEW BEST:: SOT 1510 SOS 725 HAS SOPS 725 HAS SOUS 486 HAS SOUPS 486 WITH SCORE 486.725
AT ITER 133 NEW BEST:: SOT 1506 SOS 721 HAS SOPS 721 HAS SOUS 481 HAS SOUPS 481 WITH SCORE 481.721
AT ITER 136 NEW BEST:: SOT 1500 SOS 703 HAS SOPS 703 HAS SOUS 479 HAS SOUPS 479 WITH SCORE 479.703
AT ITER 141 NEW BEST:: SOT 1498 SOS 691 HAS SOPS 691 HAS SOUS 473 HAS SOUPS 473 WITH SCORE 473.691
AT ITER 151 NEW BEST:: SOT 1498 SOS 687 HAS SOPS 687 HAS SOUS 473 HAS SOUPS 473 WITH SCORE 473.687
AT ITER 154 NEW BEST:: SOT 1496 SOS 682 HAS SOPS 682 HAS SOUS 467 HAS SOUPS 467 WITH SCORE 467.682
AT ITER 218 NEW BEST:: SOT 1488 SOS 680 HAS SOPS 680 HAS SOUS 466 HAS SOUPS 466 WITH SCORE 466.68
AT ITER 222 NEW BEST:: SOT 1488 SOS 692 HAS SOPS 692 HAS SOUS 465 HAS SOUPS 465 WITH SCORE 465.692
AT ITER 237 NEW BEST:: SOT 1486 SOS 690 HAS SOPS 690 HAS SOUS 461 HAS SOUPS 461 WITH SCORE 461.69
AT ITER 249 NEW BEST:: SOT 1479 SOS 733 HAS SOPS 733 HAS SOUS 455 HAS SOUPS 455 WITH SCORE 455.733
AT ITER 257 NEW BEST:: SOT 1475 SOS 731 HAS SOPS 731 HAS SOUS 445 HAS SOUPS 445 WITH SCORE 445.731
AT ITER 258 NEW BEST:: SOT 1473 SOS 709 HAS SOPS 709 HAS SOUS 438 HAS SOUPS 438 WITH SCORE 438.709
AT ITER 259 NEW BEST:: SOT 1469 SOS 707 HAS SOPS 707 HAS SOUS 434 HAS SOUPS 434 WITH SCORE 434.707
AT ITER 281 NEW BEST:: SOT 1467 SOS 705 HAS SOPS 705 HAS SOUS 432 HAS SOUPS 432 WITH SCORE 432.705
AT ITER 283 NEW BEST:: SOT 1461 SOS 699 HAS SOPS 699 HAS SOUS 420 HAS SOUPS 420 WITH SCORE 420.699
AT ITER 287 NEW BEST:: SOT 1459 SOS 700 HAS SOPS 700 HAS SOUS 419 HAS SOUPS 419 WITH SCORE 419.7
AT ITER 293 NEW BEST:: SOT 1457 SOS 684 HAS SOPS 684 HAS SOUS 415 HAS SOUPS 415 WITH SCORE 415.684
AT ITER 298 NEW BEST:: SOT 1457 SOS 679 HAS SOPS 679 HAS SOUS 413 HAS SOUPS 413 WITH SCORE 413.679
AT ITER 314 NEW BEST:: SOT 1451 SOS 683 HAS SOPS 683 HAS SOUS 409 HAS SOUPS 409 WITH SCORE 409.683
AT ITER 335 NEW BEST:: SOT 1449 SOS 681 HAS SOPS 681 HAS SOUS 407 HAS SOUPS 407 WITH SCORE 407.681
AT ITER 341 NEW BEST:: SOT 1449 SOS 669 HAS SOPS 669 HAS SOUS 407 HAS SOUPS 407 WITH SCORE 407.669
AT ITER 371 NEW BEST:: SOT 1451 SOS 667 HAS SOPS 667 HAS SOUS 407 HAS SOUPS 407 WITH SCORE 407.667
AT ITER 375 NEW BEST:: SOT 1451 SOS 661 HAS SOPS 661 HAS SOUS 405 HAS SOUPS 405 WITH SCORE 405.661
AT ITER 382 NEW BEST:: SOT 1452 SOS 660 HAS SOPS 660 HAS SOUS 404 HAS SOUPS 404 WITH SCORE 404.66
AT ITER 388 NEW BEST:: SOT 1451 SOS 659 HAS SOPS 659 HAS SOUS 403 HAS SOUPS 403 WITH SCORE 403.659
AT ITER 447 NEW BEST:: SOT 1445 SOS 657 HAS SOPS 657 HAS SOUS 399 HAS SOUPS 399 WITH SCORE 399.657
AT ITER 480 NEW BEST:: SOT 1443 SOS 655 HAS SOPS 655 HAS SOUS 397 HAS SOUPS 397 WITH SCORE 397.655
AT ITER 491 NEW BEST:: SOT 1442 SOS 651 HAS SOPS 651 HAS SOUS 394 HAS SOUPS 394 WITH SCORE 394.651
AT ITER 496 NEW BEST:: SOT 1439 SOS 652 HAS SOPS 652 HAS SOUS 391 HAS SOUPS 391 WITH SCORE 391.652
AT ITER 535 NEW BEST:: SOT 1439 SOS 651 HAS SOPS 651 HAS SOUS 391 HAS SOUPS 391 WITH SCORE 391.651
AT ITER 543 NEW BEST:: SOT 1433 SOS 653 HAS SOPS 653 HAS SOUS 389 HAS SOUPS 389 WITH SCORE 389.653
AT ITER 738 NEW BEST:: SOT 1431 SOS 651 HAS SOPS 651 HAS SOUS 385 HAS SOUPS 385 WITH SCORE 385.651
AT ITER 836 NEW BEST:: SOT 1431 SOS 651 HAS SOPS 651 HAS SOUS 383 HAS SOUPS 383 WITH SCORE 383.651
AT ITER 854 NEW BEST:: SOT 1431 SOS 650 HAS SOPS 650 HAS SOUS 383 HAS SOUPS 383 WITH SCORE 383.65
AT ITER 1120 NEW BEST:: SOT 1431 SOS 650 HAS SOPS 650 HAS SOUS 381 HAS SOUPS 381 WITH SCORE 381.65
AT ITER 1121 NEW BEST:: SOT 1429 SOS 648 HAS SOPS 648 HAS SOUS 378 HAS SOUPS 378 WITH SCORE 378.648
AT ITER 1152 NEW BEST:: SOT 1431 SOS 642 HAS SOPS 642 HAS SOUS 378 HAS SOUPS 378 WITH SCORE 378.642
AT ITER 1208 NEW BEST:: SOT 1429 SOS 646 HAS SOPS 646 HAS SOUS 377 HAS SOUPS 377 WITH SCORE 377.646
AT ITER 1331 NEW BEST:: SOT 1426 SOS 646 HAS SOPS 646 HAS SOUS 374 HAS SOUPS 374 WITH SCORE 374.646
AT ITER 1359 NEW BEST:: SOT 1427 SOS 647 HAS SOPS 647 HAS SOUS 371 HAS SOUPS 371 WITH SCORE 371.647
AT ITER 1440 NEW BEST:: SOT 1425 SOS 645 HAS SOPS 645 HAS SOUS 369 HAS SOUPS 369 WITH SCORE 369.645
AT ITER 1473 NEW BEST:: SOT 1422 SOS 642 HAS SOPS 642 HAS SOUS 363 HAS SOUPS 363 WITH SCORE 363.642
AT ITER 1545 NEW BEST:: SOT 1420 SOS 637 HAS SOPS 637 HAS SOUS 358 HAS SOUPS 358 WITH SCORE 358.637
AT ITER 1710 NEW BEST:: SOT 1418 SOS 634 HAS SOPS 634 HAS SOUS 354 HAS SOUPS 354 WITH SCORE 354.634
AT ITER 2122 NEW BEST:: SOT 1416 SOS 632 HAS SOPS 632 HAS SOUS 354 HAS SOUPS 354 WITH SCORE 354.632
AT ITER 2529 NEW BEST:: SOT 1416 SOS 630 HAS SOPS 630 HAS SOUS 352 HAS SOUPS 352 WITH SCORE 352.63

BK_STOP 1589131219032

--------------------
content from stderr:

/home/mcc/BenchKit/bin/smart.sh: line 117: 365 Segmentation fault ${SMART} ${INPUT_SM}

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-50"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="smart"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool smart"
echo " Input is Angiogenesis-PT-50, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r003-smll-158897508400361"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-50.tgz
mv Angiogenesis-PT-50 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;