Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2020-input.r003-smll-158897508400353.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2020-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
.....................
=====================================================================
Generated by BenchKit 2-4028
Executing tool smart
Input is Angiogenesis-PT-25, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r003-smll-158897508400353
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 208K
-rw-r--r-- 1 mcc users 3.7K Apr 28 14:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 18K Apr 28 14:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K Apr 28 14:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 28 14:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 28 14:22 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.9K Apr 28 14:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Apr 28 14:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K Apr 28 14:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Apr 28 14:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K Apr 28 14:22 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K Apr 28 14:22 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.6K Apr 28 14:22 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 28 14:22 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Apr 28 14:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Apr 28 14:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 equiv_col
-rw-r--r-- 1 mcc users 3 Apr 28 14:22 instance
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 iscolored
-rw-r--r-- 1 mcc users 33K Apr 28 14:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1589128380679

======================================================
========== this is Smart for the MCC'2018 ============
======================================================
Running Angiogenesis (PT), instance 25
Examination StateSpace
Parser /home/mcc/BenchKit/bin/parser/StateSpaceParse.jar
Model checker /home/mcc/BenchKit/bin/main/smart

Filename model.pnml
Petri model created: 39 places, 64 transitions, 185 arcs.
AT ITER 0 NEW BEST:: SOT 1596 SOS 760 HAS SOPS 760 HAS SOUS 597 HAS SOUPS 597 WITH SCORE 597.76
AT ITER 2 NEW BEST:: SOT 1576 SOS 747 HAS SOPS 747 HAS SOUS 582 HAS SOUPS 582 WITH SCORE 582.747
AT ITER 4 NEW BEST:: SOT 1576 SOS 740 HAS SOPS 740 HAS SOUS 581 HAS SOUPS 581 WITH SCORE 581.74
AT ITER 10 NEW BEST:: SOT 1550 SOS 806 HAS SOPS 806 HAS SOUS 559 HAS SOUPS 559 WITH SCORE 559.806
AT ITER 14 NEW BEST:: SOT 1546 SOS 802 HAS SOPS 802 HAS SOUS 542 HAS SOUPS 542 WITH SCORE 542.802
AT ITER 33 NEW BEST:: SOT 1538 SOS 794 HAS SOPS 794 HAS SOUS 528 HAS SOUPS 528 WITH SCORE 528.794
AT ITER 41 NEW BEST:: SOT 1538 SOS 794 HAS SOPS 794 HAS SOUS 524 HAS SOUPS 524 WITH SCORE 524.794
AT ITER 50 NEW BEST:: SOT 1538 SOS 793 HAS SOPS 793 HAS SOUS 524 HAS SOUPS 524 WITH SCORE 524.793
AT ITER 57 NEW BEST:: SOT 1522 SOS 775 HAS SOPS 775 HAS SOUS 508 HAS SOUPS 508 WITH SCORE 508.775
AT ITER 59 NEW BEST:: SOT 1519 SOS 772 HAS SOPS 772 HAS SOUS 504 HAS SOUPS 504 WITH SCORE 504.772
AT ITER 77 NEW BEST:: SOT 1519 SOS 770 HAS SOPS 770 HAS SOUS 502 HAS SOUPS 502 WITH SCORE 502.77
AT ITER 90 NEW BEST:: SOT 1519 SOS 758 HAS SOPS 758 HAS SOUS 500 HAS SOUPS 500 WITH SCORE 500.758
AT ITER 112 NEW BEST:: SOT 1498 SOS 816 HAS SOPS 816 HAS SOUS 484 HAS SOUPS 484 WITH SCORE 484.816
AT ITER 154 NEW BEST:: SOT 1498 SOS 828 HAS SOPS 828 HAS SOUS 483 HAS SOUPS 483 WITH SCORE 483.828
AT ITER 160 NEW BEST:: SOT 1492 SOS 810 HAS SOPS 810 HAS SOUS 483 HAS SOUPS 483 WITH SCORE 483.81
AT ITER 191 NEW BEST:: SOT 1483 SOS 793 HAS SOPS 793 HAS SOUS 471 HAS SOUPS 471 WITH SCORE 471.793
AT ITER 199 NEW BEST:: SOT 1469 SOS 779 HAS SOPS 779 HAS SOUS 463 HAS SOUPS 463 WITH SCORE 463.779
AT ITER 214 NEW BEST:: SOT 1461 SOS 776 HAS SOPS 776 HAS SOUS 456 HAS SOUPS 456 WITH SCORE 456.776
AT ITER 217 NEW BEST:: SOT 1461 SOS 773 HAS SOPS 773 HAS SOUS 456 HAS SOUPS 456 WITH SCORE 456.773
AT ITER 219 NEW BEST:: SOT 1459 SOS 771 HAS SOPS 771 HAS SOUS 452 HAS SOUPS 452 WITH SCORE 452.771
AT ITER 245 NEW BEST:: SOT 1458 SOS 722 HAS SOPS 722 HAS SOUS 449 HAS SOUPS 449 WITH SCORE 449.722
AT ITER 252 NEW BEST:: SOT 1458 SOS 721 HAS SOPS 721 HAS SOUS 447 HAS SOUPS 447 WITH SCORE 447.721
AT ITER 265 NEW BEST:: SOT 1460 SOS 715 HAS SOPS 715 HAS SOUS 446 HAS SOUPS 446 WITH SCORE 446.715
AT ITER 270 NEW BEST:: SOT 1461 SOS 714 HAS SOPS 714 HAS SOUS 446 HAS SOUPS 446 WITH SCORE 446.714
AT ITER 307 NEW BEST:: SOT 1461 SOS 712 HAS SOPS 712 HAS SOUS 444 HAS SOUPS 444 WITH SCORE 444.712
AT ITER 316 NEW BEST:: SOT 1458 SOS 709 HAS SOPS 709 HAS SOUS 444 HAS SOUPS 444 WITH SCORE 444.709
AT ITER 394 NEW BEST:: SOT 1458 SOS 708 HAS SOPS 708 HAS SOUS 441 HAS SOUPS 441 WITH SCORE 441.708
AT ITER 428 NEW BEST:: SOT 1462 SOS 712 HAS SOPS 712 HAS SOUS 439 HAS SOUPS 439 WITH SCORE 439.712
AT ITER 448 NEW BEST:: SOT 1454 SOS 706 HAS SOPS 706 HAS SOUS 427 HAS SOUPS 427 WITH SCORE 427.706
AT ITER 491 NEW BEST:: SOT 1451 SOS 653 HAS SOPS 653 HAS SOUS 424 HAS SOUPS 424 WITH SCORE 424.653
AT ITER 528 NEW BEST:: SOT 1450 SOS 655 HAS SOPS 655 HAS SOUS 423 HAS SOUPS 423 WITH SCORE 423.655
AT ITER 560 NEW BEST:: SOT 1449 SOS 652 HAS SOPS 652 HAS SOUS 421 HAS SOUPS 421 WITH SCORE 421.652
AT ITER 561 NEW BEST:: SOT 1446 SOS 649 HAS SOPS 649 HAS SOUS 419 HAS SOUPS 419 WITH SCORE 419.649
AT ITER 567 NEW BEST:: SOT 1445 SOS 648 HAS SOPS 648 HAS SOUS 416 HAS SOUPS 416 WITH SCORE 416.648
AT ITER 593 NEW BEST:: SOT 1443 SOS 642 HAS SOPS 642 HAS SOUS 408 HAS SOUPS 408 WITH SCORE 408.642
AT ITER 606 NEW BEST:: SOT 1444 SOS 643 HAS SOPS 643 HAS SOUS 406 HAS SOUPS 406 WITH SCORE 406.643
AT ITER 626 NEW BEST:: SOT 1440 SOS 659 HAS SOPS 659 HAS SOUS 402 HAS SOUPS 402 WITH SCORE 402.659
AT ITER 636 NEW BEST:: SOT 1440 SOS 659 HAS SOPS 659 HAS SOUS 401 HAS SOUPS 401 WITH SCORE 401.659
AT ITER 722 NEW BEST:: SOT 1440 SOS 651 HAS SOPS 651 HAS SOUS 393 HAS SOUPS 393 WITH SCORE 393.651
AT ITER 751 NEW BEST:: SOT 1440 SOS 647 HAS SOPS 647 HAS SOUS 389 HAS SOUPS 389 WITH SCORE 389.647
AT ITER 752 NEW BEST:: SOT 1436 SOS 645 HAS SOPS 645 HAS SOUS 385 HAS SOUPS 385 WITH SCORE 385.645
AT ITER 1199 NEW BEST:: SOT 1435 SOS 654 HAS SOPS 654 HAS SOUS 384 HAS SOUPS 384 WITH SCORE 384.654
AT ITER 1244 NEW BEST:: SOT 1433 SOS 652 HAS SOPS 652 HAS SOUS 382 HAS SOUPS 382 WITH SCORE 382.652
AT ITER 1545 NEW BEST:: SOT 1433 SOS 646 HAS SOPS 646 HAS SOUS 382 HAS SOUPS 382 WITH SCORE 382.646
AT ITER 1834 NEW BEST:: SOT 1431 SOS 666 HAS SOPS 666 HAS SOUS 381 HAS SOUPS 381 WITH SCORE 381.666
AT ITER 1846 NEW BEST:: SOT 1429 SOS 662 HAS SOPS 662 HAS SOUS 381 HAS SOUPS 381 WITH SCORE 381.662
AT ITER 2194 NEW BEST:: SOT 1431 SOS 650 HAS SOPS 650 HAS SOUS 381 HAS SOUPS 381 WITH SCORE 381.65
AT ITER 2310 NEW BEST:: SOT 1431 SOS 650 HAS SOPS 650 HAS SOUS 379 HAS SOUPS 379 WITH SCORE 379.65
AT ITER 3031 NEW BEST:: SOT 1430 SOS 640 HAS SOPS 640 HAS SOUS 377 HAS SOUPS 377 WITH SCORE 377.64

BK_STOP 1589129536871

--------------------
content from stderr:

terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
/home/mcc/BenchKit/bin/smart.sh: line 117: 365 Aborted ${SMART} ${INPUT_SM}

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-25"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="smart"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool smart"
echo " Input is Angiogenesis-PT-25, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r003-smll-158897508400353"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-25.tgz
mv Angiogenesis-PT-25 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;