Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/local/x2003239/mcc2020-input.r111-csrt-158961257100092.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2020-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
......................................................................................................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is MAPKbis-PT-5310, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r111-csrt-158961257100092
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 380K
-rw-r--r-- 1 mcc users 4.1K Apr 27 15:14 CTLCardinality.txt
-rw-r--r-- 1 mcc users 20K Apr 27 15:14 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.3K Apr 27 15:14 CTLFireability.txt
-rw-r--r-- 1 mcc users 19K Apr 27 15:14 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 27 15:14 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K Apr 27 15:14 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.0K Apr 27 15:14 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Apr 28 14:01 LTLCardinality.xml
-rw-r--r-- 1 mcc users 6.0K Apr 27 15:14 LTLFireability.txt
-rw-r--r-- 1 mcc users 21K Apr 28 14:01 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K Apr 27 15:14 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Apr 27 15:14 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 5.8K Apr 27 15:14 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K Apr 27 15:14 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Apr 27 15:14 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Apr 27 15:14 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Apr 27 15:14 equiv_col
-rw-r--r-- 1 mcc users 5 Apr 27 15:14 instance
-rw-r--r-- 1 mcc users 6 Apr 27 15:14 iscolored
-rw-r--r-- 1 mcc users 170K Apr 27 15:14 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-00
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-01
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-02
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-03
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-04
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-05
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-06
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-07
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-08
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-09
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-10
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-11
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-12
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-13
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-14
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1589827287476

[2020-05-18 18:41:31] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-18 18:41:31] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-18 18:41:31] [INFO ] Load time of PNML (sax parser for PT used): 82 ms
[2020-05-18 18:41:31] [INFO ] Transformed 106 places.
[2020-05-18 18:41:31] [INFO ] Transformed 173 transitions.
[2020-05-18 18:41:31] [INFO ] Found NUPN structural information;
[2020-05-18 18:41:31] [INFO ] Parsed PT model containing 106 places and 173 transitions in 174 ms.
Deduced a syphon composed of 11 places in 1 ms
Reduce places removed 15 places and 41 transitions.
Parsed 16 properties from file /home/mcc/execution/CTLFireability.xml in 22 ms.
Incomplete random walk after 100000 steps, including 0 resets, run finished after 370 ms. (steps per millisecond=270 ) properties seen :[1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 0, 1, 0, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1]
[2020-05-18 18:41:32] [INFO ] Flow matrix only has 84 transitions (discarded 48 similar events)
// Phase 1: matrix 84 rows 91 cols
[2020-05-18 18:41:32] [INFO ] Computed 49 place invariants in 5 ms
[2020-05-18 18:41:32] [INFO ] [Real]Absence check using 49 positive place invariants in 375 ms returned sat
[2020-05-18 18:41:32] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:33] [INFO ] [Real]Absence check using state equation in 471 ms returned sat
[2020-05-18 18:41:33] [INFO ] State equation strengthened by 54 read => feed constraints.
[2020-05-18 18:41:33] [INFO ] [Real]Added 54 Read/Feed constraints in 96 ms returned sat
[2020-05-18 18:41:33] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 18:41:33] [INFO ] [Nat]Absence check using 49 positive place invariants in 157 ms returned sat
[2020-05-18 18:41:33] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:33] [INFO ] [Nat]Absence check using state equation in 55 ms returned sat
[2020-05-18 18:41:33] [INFO ] [Nat]Added 54 Read/Feed constraints in 8 ms returned sat
[2020-05-18 18:41:33] [INFO ] Computed and/alt/rep : 131/175/83 causal constraints in 24 ms.
[2020-05-18 18:41:34] [INFO ] Added : 65 causal constraints over 13 iterations in 663 ms. Result :sat
[2020-05-18 18:41:34] [INFO ] [Real]Absence check using 49 positive place invariants in 213 ms returned sat
[2020-05-18 18:41:34] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:35] [INFO ] [Real]Absence check using state equation in 262 ms returned sat
[2020-05-18 18:41:35] [INFO ] [Real]Added 54 Read/Feed constraints in 48 ms returned sat
[2020-05-18 18:41:35] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 18:41:35] [INFO ] [Nat]Absence check using 49 positive place invariants in 242 ms returned sat
[2020-05-18 18:41:35] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:35] [INFO ] [Nat]Absence check using state equation in 306 ms returned sat
[2020-05-18 18:41:35] [INFO ] [Nat]Added 54 Read/Feed constraints in 40 ms returned sat
[2020-05-18 18:41:35] [INFO ] Computed and/alt/rep : 131/175/83 causal constraints in 13 ms.
[2020-05-18 18:41:36] [INFO ] Added : 65 causal constraints over 13 iterations in 424 ms. Result :sat
[2020-05-18 18:41:36] [INFO ] [Real]Absence check using 49 positive place invariants in 47 ms returned sat
[2020-05-18 18:41:36] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:36] [INFO ] [Real]Absence check using state equation in 140 ms returned sat
[2020-05-18 18:41:36] [INFO ] [Real]Added 54 Read/Feed constraints in 14 ms returned sat
[2020-05-18 18:41:36] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 18:41:36] [INFO ] [Nat]Absence check using 49 positive place invariants in 45 ms returned sat
[2020-05-18 18:41:36] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:36] [INFO ] [Nat]Absence check using state equation in 323 ms returned sat
[2020-05-18 18:41:36] [INFO ] [Nat]Added 54 Read/Feed constraints in 6 ms returned sat
[2020-05-18 18:41:36] [INFO ] Computed and/alt/rep : 131/175/83 causal constraints in 9 ms.
[2020-05-18 18:41:37] [INFO ] Added : 65 causal constraints over 13 iterations in 306 ms. Result :sat
[2020-05-18 18:41:37] [INFO ] [Real]Absence check using 49 positive place invariants in 164 ms returned sat
[2020-05-18 18:41:37] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:37] [INFO ] [Real]Absence check using state equation in 189 ms returned sat
[2020-05-18 18:41:37] [INFO ] [Real]Added 54 Read/Feed constraints in 19 ms returned sat
[2020-05-18 18:41:37] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 18:41:37] [INFO ] [Nat]Absence check using 49 positive place invariants in 168 ms returned sat
[2020-05-18 18:41:37] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:37] [INFO ] [Nat]Absence check using state equation in 58 ms returned sat
[2020-05-18 18:41:37] [INFO ] [Nat]Added 54 Read/Feed constraints in 6 ms returned sat
[2020-05-18 18:41:38] [INFO ] Computed and/alt/rep : 131/175/83 causal constraints in 21 ms.
[2020-05-18 18:41:38] [INFO ] Added : 65 causal constraints over 13 iterations in 175 ms. Result :sat
[2020-05-18 18:41:38] [INFO ] [Real]Absence check using 49 positive place invariants in 43 ms returned sat
[2020-05-18 18:41:38] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:38] [INFO ] [Real]Absence check using state equation in 145 ms returned sat
[2020-05-18 18:41:38] [INFO ] [Real]Added 54 Read/Feed constraints in 15 ms returned sat
[2020-05-18 18:41:38] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 18:41:38] [INFO ] [Nat]Absence check using 49 positive place invariants in 223 ms returned sat
[2020-05-18 18:41:38] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:38] [INFO ] [Nat]Absence check using state equation in 211 ms returned sat
[2020-05-18 18:41:38] [INFO ] [Nat]Added 54 Read/Feed constraints in 5 ms returned sat
[2020-05-18 18:41:38] [INFO ] Computed and/alt/rep : 131/175/83 causal constraints in 50 ms.
[2020-05-18 18:41:39] [INFO ] Added : 66 causal constraints over 14 iterations in 295 ms. Result :sat
[2020-05-18 18:41:39] [INFO ] [Real]Absence check using 49 positive place invariants in 22 ms returned sat
[2020-05-18 18:41:39] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:39] [INFO ] [Real]Absence check using state equation in 175 ms returned sat
[2020-05-18 18:41:39] [INFO ] [Real]Added 54 Read/Feed constraints in 8 ms returned sat
[2020-05-18 18:41:39] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 18:41:39] [INFO ] [Nat]Absence check using 49 positive place invariants in 27 ms returned sat
[2020-05-18 18:41:39] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 18:41:39] [INFO ] [Nat]Absence check using state equation in 45 ms returned sat
[2020-05-18 18:41:39] [INFO ] [Nat]Added 54 Read/Feed constraints in 5 ms returned sat
[2020-05-18 18:41:39] [INFO ] Computed and/alt/rep : 131/175/83 causal constraints in 7 ms.
[2020-05-18 18:41:39] [INFO ] Added : 68 causal constraints over 14 iterations in 258 ms. Result :sat
[2020-05-18 18:41:40] [INFO ] Found a total of 7 fixed domain variables (out of 91 variables) in GAL type petri
[2020-05-18 18:41:40] [INFO ] Found a total of 7 constant array cells/variables (out of 91 variables) in type petri
[2020-05-18 18:41:40] [INFO ] TAK1_equals_0,TGFBR_equals_0,SMAD_equals_0,FRS2_equals_0,FGFR3_equals_0,ATM_equals_0,TAOK_equals_0,
[2020-05-18 18:41:40] [INFO ] Removed 7 constant variables :TAK1_equals_0=1, TGFBR_equals_0=1, SMAD_equals_0=1, FRS2_equals_0=1, FGFR3_equals_0=1, ATM_equals_0=1, TAOK_equals_0=1
[2020-05-18 18:41:40] [INFO ] Simplified 28 expressions due to constant valuations.
[2020-05-18 18:41:40] [INFO ] Initial state reduction rules for CTL removed 2 formulas.
[2020-05-18 18:41:40] [INFO ] Flatten gal took : 64 ms
[2020-05-18 18:41:40] [INFO ] Initial state reduction rules for CTL removed 2 formulas.
[2020-05-18 18:41:40] [INFO ] Flatten gal took : 33 ms
FORMULA MAPKbis-PT-5310-CTLFireability-07 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPKbis-PT-5310-CTLFireability-01 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2020-05-18 18:41:40] [INFO ] Applying decomposition
[2020-05-18 18:41:40] [INFO ] Flatten gal took : 27 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph12035769984164818463.txt, -o, /tmp/graph12035769984164818463.bin, -w, /tmp/graph12035769984164818463.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph12035769984164818463.bin, -l, -1, -v, -w, /tmp/graph12035769984164818463.weights, -q, 0, -e, 0.001], workingDir=null]
[2020-05-18 18:41:40] [INFO ] Decomposing Gal with order
[2020-05-18 18:41:40] [INFO ] Rewriting arrays to variables to allow decomposition.
[2020-05-18 18:41:40] [INFO ] Removed a total of 173 redundant transitions.
[2020-05-18 18:41:40] [INFO ] Flatten gal took : 77 ms
[2020-05-18 18:41:40] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 4 ms.
[2020-05-18 18:41:40] [INFO ] Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 9 ms
[2020-05-18 18:41:40] [INFO ] Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 3 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 14 CTL formulae.
built 23 ordering constraints for composite.
built 17 ordering constraints for composite.
built 12 ordering constraints for composite.
built 8 ordering constraints for composite.
built 16 ordering constraints for composite.
built 12 ordering constraints for composite.
built 10 ordering constraints for composite.
built 16 ordering constraints for composite.
built 18 ordering constraints for composite.
built 12 ordering constraints for composite.
built 20 ordering constraints for composite.
built 11 ordering constraints for composite.
built 19 ordering constraints for composite.
built 19 ordering constraints for composite.
built 9 ordering constraints for composite.
built 6 ordering constraints for composite.
built 5 ordering constraints for composite.
built 6 ordering constraints for composite.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,3.84641e+12,1.48214,43232,84,11,72597,80,381,176178,23,252,0


Converting to forward existential form...Done !
original formula: EF((AG(((i0.i0.u6.EGFR_equals_1==1)&&(i0.i0.u13.GRB2_equals_1==1))) + AG((((i0.i0.u6.EGFR_equals_0==1)&&(i0.i0.u13.GRB2_equals_0==1))&&(i0.i2.u26.PKC_equals_0==1)))))
=> equivalent forward existential formula: ([(FwdU(Init,TRUE) * !(E(TRUE U !(((i0.i0.u6.EGFR_equals_1==1)&&(i0.i0.u13.GRB2_equals_1==1))))))] != FALSE + [(FwdU(Init,TRUE) * !(E(TRUE U !((((i0.i0.u6.EGFR_equals_0==1)&&(i0.i0.u13.GRB2_equals_0==1))&&(i0.i2.u26.PKC_equals_0==1))))))] != FALSE)
Reverse transition relation is NOT exact ! Due to transitions ERK_equals_0_to_ERK_equals_1_when_MEK1_2_equals_1, MAP3K1_3_equals_1_to_MAP3K1_3_equals_0_when_RAS_equals_0, MTK1_equals_1_to_MTK1_equals_0_when_GADD45_equals_0, PPP2CA_equals_1_to_PPP2CA_equals_0_when_p38_equals_0, SOS_equals_1_to_SOS_equals_0_when_RSK_equals_1, p53_equals_1_to_p53_equals_0_when_ATM_equals_0_and_p38_equals_0, i0.RAS_equals_0_to_RAS_equals_1_when_SOS_equals_1, i0.PLCG_equals_0_to_PLCG_equals_1_when_EGFR_equals_1, i0.EGFR_equals_1_to_EGFR_equals_0_when_PKC_equals_1, i0.i0.EGFR_equals_1_to_EGFR_equals_0_when_GRB2_equals_1, i0.i0.SOS_equals_1_to_SOS_equals_0_when_GRB2_equals_0, i0.i2.PKC_equals_1_to_PKC_equals_0_when_PLCG_equals_0, i0.i2.RAS_equals_0_to_RAS_equals_1_when_PLCG_equals_1, i1.p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1, i1.p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_MTK1_equals_1, i1.p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_MAP3K1_3_equals_1, i2.MEK1_2_equals_1_to_MEK1_2_equals_0_when_AP1_equals_1, i2.i1.MEK1_2_equals_1_to_MEK1_2_equals_0_when_PPP2CA_equals_1, i4.i1.GADD45_equals_0_to_GADD45_equals_1_when_p53_equals_1, i4.i1.p53_equals_1_to_p53_equals_0_when_ATM_equals_0_and_MDM2_equals_1, i5.RSK_equals_1_to_RSK_equals_0_when_ERK_equals_0, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :2/109/21/132
(forward)formula 0,0,1.51971,43232,1,0,72597,80,1972,176178,95,252,9258
FORMULA MAPKbis-PT-5310-CTLFireability-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: (!(EF(((i3.u21.MSK_equals_0==1)&&(i1.u38.p38_equals_1==1)))) + !(EF(((i7.u3.Apoptosis_equals_1==1)&&(i7.u10.FOXO3_equals_0==1)))))
=> equivalent forward existential formula: [(FwdU((Init * !(!(E(TRUE U ((i3.u21.MSK_equals_0==1)&&(i1.u38.p38_equals_1==1)))))),TRUE) * ((i7.u3.Apoptosis_equals_1==1)&&(i7.u10.FOXO3_equals_0==1)))] = FALSE
(forward)formula 1,0,2.90896,49948,1,0,86533,80,2436,205283,96,252,149337
FORMULA MAPKbis-PT-5310-CTLFireability-02 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: EF(AG((((i0.i1.u11.GAB1_equals_1==1)&&(i0.i0.u13.GRB2_equals_0==1))&&(i0.i1.u25.PI3K_equals_0==1))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !((((i0.i1.u11.GAB1_equals_1==1)&&(i0.i0.u13.GRB2_equals_0==1))&&(i0.i1.u25.PI3K_equals_0==1))))))] != FALSE
(forward)formula 2,0,2.91354,50212,1,0,86557,80,2453,205301,96,252,149443
FORMULA MAPKbis-PT-5310-CTLFireability-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: E(A(((i4.i1.u12.GADD45_equals_0==1)&&(i1.u22.MTK1_equals_1==1)) U ((i7.u3.Apoptosis_equals_1==1)&&(i5.u8.ERK_equals_1==1))) U (AF(((i0.i1.u11.GAB1_equals_1==1)&&(i0.i1.u25.PI3K_equals_0==1))) + EF(((i4.i1.u12.GADD45_equals_1==1)&&(i4.i1.u39.p53_equals_0==1)))))
=> equivalent forward existential formula: ([(FwdU(Init,!((E(!(((i7.u3.Apoptosis_equals_1==1)&&(i5.u8.ERK_equals_1==1))) U (!(((i4.i1.u12.GADD45_equals_0==1)&&(i1.u22.MTK1_equals_1==1))) * !(((i7.u3.Apoptosis_equals_1==1)&&(i5.u8.ERK_equals_1==1))))) + EG(!(((i7.u3.Apoptosis_equals_1==1)&&(i5.u8.ERK_equals_1==1))))))) * !(EG(!(((i0.i1.u11.GAB1_equals_1==1)&&(i0.i1.u25.PI3K_equals_0==1))))))] != FALSE + [(FwdU(FwdU(Init,!((E(!(((i7.u3.Apoptosis_equals_1==1)&&(i5.u8.ERK_equals_1==1))) U (!(((i4.i1.u12.GADD45_equals_0==1)&&(i1.u22.MTK1_equals_1==1))) * !(((i7.u3.Apoptosis_equals_1==1)&&(i5.u8.ERK_equals_1==1))))) + EG(!(((i7.u3.Apoptosis_equals_1==1)&&(i5.u8.ERK_equals_1==1))))))),TRUE) * ((i4.i1.u12.GADD45_equals_1==1)&&(i4.i1.u39.p53_equals_0==1)))] != FALSE)
Fast SCC detection found a local SCC at level 1
Fast SCC detection found an SCC at level 2
Fast SCC detection found an SCC at level 3
Fast SCC detection found an SCC at level 4
Fast SCC detection found an SCC at level 5
Fast SCC detection found an SCC at level 6
Fast SCC detection found an SCC at level 7
(forward)formula 3,1,3.0531,53380,1,0,91628,80,2566,223049,96,252,151199
FORMULA MAPKbis-PT-5310-CTLFireability-04 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: EF(EG(((i4.i1.u19.MDM2_equals_1==1)&&(i4.i0.u36.p14_equals_1==1))))
=> equivalent forward existential formula: [FwdG(FwdU(Init,TRUE),((i4.i1.u19.MDM2_equals_1==1)&&(i4.i0.u36.p14_equals_1==1)))] != FALSE
(forward)formula 4,1,3.07001,53644,1,0,93492,80,2612,228309,96,252,151953
FORMULA MAPKbis-PT-5310-CTLFireability-05 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: EF((AF((((((i7.u3.Apoptosis_equals_1==1)&&(i3.u4.BCL2_equals_1==1))&&(i3.u5.CREB_equals_0==1))&&(i5.u7.ELK1_equals_0==1))&&(i5.u9.FOS_equals_1==1))) * !(AG(((i6.i1.u14.Growth_Arrest_equals_1==1)&&(i6.i1.u37.p21_equals_0==1))))))
=> equivalent forward existential formula: [(FwdU((FwdU(Init,TRUE) * !(EG(!((((((i7.u3.Apoptosis_equals_1==1)&&(i3.u4.BCL2_equals_1==1))&&(i3.u5.CREB_equals_0==1))&&(i5.u7.ELK1_equals_0==1))&&(i5.u9.FOS_equals_1==1)))))),TRUE) * !(((i6.i1.u14.Growth_Arrest_equals_1==1)&&(i6.i1.u37.p21_equals_0==1))))] != FALSE
(forward)formula 5,1,3.10859,55228,1,0,96137,80,2651,235738,96,252,155851
FORMULA MAPKbis-PT-5310-CTLFireability-06 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: !(EF(((((((((i5.u8.ERK_equals_1==1)&&(i2.i1.u20.MEK1_2_equals_0==1))&&(i3.u5.CREB_equals_1==1))&&(i3.u21.MSK_equals_0==1))&&(i1.u38.DUSP1_equals_1==1))&&(i1.u17.MAP3K1_3_equals_1==1))&&(i1.u22.MTK1_equals_0==1))&&(i1.u38.p38_equals_1==1))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * ((((((((i5.u8.ERK_equals_1==1)&&(i2.i1.u20.MEK1_2_equals_0==1))&&(i3.u5.CREB_equals_1==1))&&(i3.u21.MSK_equals_0==1))&&(i1.u38.DUSP1_equals_1==1))&&(i1.u17.MAP3K1_3_equals_1==1))&&(i1.u22.MTK1_equals_0==1))&&(i1.u38.p38_equals_1==1)))] = FALSE
(forward)formula 6,0,3.11052,55756,1,0,96143,80,2689,235745,98,252,155871
FORMULA MAPKbis-PT-5310-CTLFireability-08 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: EF(AG(((i1.u17.MAP3K1_3_equals_0==1)&&(i0.i2.u32.RAS_equals_1==1))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !(((i1.u17.MAP3K1_3_equals_0==1)&&(i0.i2.u32.RAS_equals_1==1))))))] != FALSE
(forward)formula 7,0,3.1117,55756,1,0,96155,80,2693,235754,98,252,155925
FORMULA MAPKbis-PT-5310-CTLFireability-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: (!(EF(((i5.u8.ERK_equals_0==1)&&(i5.u35.SPRY_equals_1==1)))) * !(EX(((i2.i0.u1.AP1_equals_1==1)&&(i2.i1.u20.MEK1_2_equals_1==1)))))
=> equivalent forward existential formula: ([(FwdU(Init,TRUE) * ((i5.u8.ERK_equals_0==1)&&(i5.u35.SPRY_equals_1==1)))] = FALSE * [(EY(Init) * ((i2.i0.u1.AP1_equals_1==1)&&(i2.i1.u20.MEK1_2_equals_1==1)))] = FALSE)
(forward)formula 8,0,3.11285,55756,1,0,96187,80,2706,235768,98,252,156227
FORMULA MAPKbis-PT-5310-CTLFireability-10 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: AF(AG((((i4.i1.u0.AKT_0==1)&&(i6.i1.u37.p21_equals_0==1))&&(i4.i1.u39.p53_equals_1==1))))
=> equivalent forward existential formula: [FwdG(Init,!(!(E(TRUE U !((((i4.i1.u0.AKT_0==1)&&(i6.i1.u37.p21_equals_0==1))&&(i4.i1.u39.p53_equals_1==1)))))))] = FALSE
(forward)formula 9,0,3.126,55756,1,0,97341,80,2719,238574,98,252,157827
FORMULA MAPKbis-PT-5310-CTLFireability-11 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: EF(EG(((i5.u8.ERK_equals_0==1)&&(i6.i0.u40.p70_equals_1==1))))
=> equivalent forward existential formula: [FwdG(FwdU(Init,TRUE),((i5.u8.ERK_equals_0==1)&&(i6.i0.u40.p70_equals_1==1)))] != FALSE
(forward)formula 10,1,3.12941,56020,1,0,97572,80,2741,239152,98,252,158008
FORMULA MAPKbis-PT-5310-CTLFireability-12 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: A((EF(((i1.u15.JNK_equals_0==1)&&(i2.i0.u16.JUN_equals_1==1))) + (((i3.u5.CREB_equals_1==1)&&(i1.u38.DUSP1_equals_0==1))&&((((i0.i0.u13.GRB2_equals_1==1)&&(i5.u33.RSK_equals_0==1))&&(i0.i0.u34.SOS_equals_0==1))||((i0.i1.u24.PDK1_equals_1==1)&&(i0.i1.u25.PI3K_equals_0==1))))) U EF((((i5.u8.ERK_equals_0==1)&&(i3.u21.MSK_equals_1==1))&&(i1.u38.p38_equals_0==1))))
=> equivalent forward existential formula: [((Init * !(EG(!(E(TRUE U (((i5.u8.ERK_equals_0==1)&&(i3.u21.MSK_equals_1==1))&&(i1.u38.p38_equals_0==1))))))) * !(E(!(E(TRUE U (((i5.u8.ERK_equals_0==1)&&(i3.u21.MSK_equals_1==1))&&(i1.u38.p38_equals_0==1)))) U (!((E(TRUE U ((i1.u15.JNK_equals_0==1)&&(i2.i0.u16.JUN_equals_1==1))) + (((i3.u5.CREB_equals_1==1)&&(i1.u38.DUSP1_equals_0==1))&&((((i0.i0.u13.GRB2_equals_1==1)&&(i5.u33.RSK_equals_0==1))&&(i0.i0.u34.SOS_equals_0==1))||((i0.i1.u24.PDK1_equals_1==1)&&(i0.i1.u25.PI3K_equals_0==1)))))) * !(E(TRUE U (((i5.u8.ERK_equals_0==1)&&(i3.u21.MSK_equals_1==1))&&(i1.u38.p38_equals_0==1))))))))] != FALSE
(forward)formula 11,1,3.19544,58396,1,0,102707,80,2759,249271,99,252,165850
FORMULA MAPKbis-PT-5310-CTLFireability-13 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: EF((((i5.u9.FOS_equals_1==1)&&(i5.u33.RSK_equals_0==1)) * E(((((i1.u38.DUSP1_equals_1==1)&&(i1.u15.JNK_equals_0==1))&&(i1.u17.MAP3K1_3_equals_1==1))&&(i1.u22.MTK1_equals_1==1)) U (((i4.i1.u0.AKT_0==1)&&(i0.i1.u24.PDK1_equals_1==1))&&(i4.i1.u29.PTEN_equals_0==1)))))
=> equivalent forward existential formula: [(FwdU((FwdU(Init,TRUE) * ((i5.u9.FOS_equals_1==1)&&(i5.u33.RSK_equals_0==1))),((((i1.u38.DUSP1_equals_1==1)&&(i1.u15.JNK_equals_0==1))&&(i1.u17.MAP3K1_3_equals_1==1))&&(i1.u22.MTK1_equals_1==1))) * (((i4.i1.u0.AKT_0==1)&&(i0.i1.u24.PDK1_equals_1==1))&&(i4.i1.u29.PTEN_equals_0==1)))] != FALSE
(forward)formula 12,1,3.20825,58660,1,0,103774,80,2818,251137,99,252,167499
FORMULA MAPKbis-PT-5310-CTLFireability-14 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: E(EX(((((((i1.u38.DUSP1_equals_1==1)&&(i1.u17.MAP3K1_3_equals_1==1))&&(i1.u22.MTK1_equals_0==1))&&(i1.u38.p38_equals_1==1))&&(i5.u8.ERK_equals_1==1))&&(i3.u21.MSK_equals_0==1))) U EF(((i5.u9.FOS_equals_1==1)&&(i5.u33.RSK_equals_0==1))))
=> equivalent forward existential formula: [(FwdU(FwdU(Init,EX(((((((i1.u38.DUSP1_equals_1==1)&&(i1.u17.MAP3K1_3_equals_1==1))&&(i1.u22.MTK1_equals_0==1))&&(i1.u38.p38_equals_1==1))&&(i5.u8.ERK_equals_1==1))&&(i3.u21.MSK_equals_0==1)))),TRUE) * ((i5.u9.FOS_equals_1==1)&&(i5.u33.RSK_equals_0==1)))] != FALSE
(forward)formula 13,1,3.21353,59188,1,0,104102,80,2830,252076,99,252,167762
FORMULA MAPKbis-PT-5310-CTLFireability-15 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************


BK_STOP 1589827304517

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5310"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is MAPKbis-PT-5310, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r111-csrt-158961257100092"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5310.tgz
mv MAPKbis-PT-5310 execution
cd execution
if [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "UpperBounds" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] || [ "CTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;