Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/local/x2003239/mcc2020-input.r111-csrt-158961257000004.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2020-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
...................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is MAPK-PT-00008, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r111-csrt-158961257000004
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 204K
-rw-r--r-- 1 mcc users 2.9K Apr 8 12:59 CTLCardinality.txt
-rw-r--r-- 1 mcc users 15K Apr 8 12:59 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Apr 7 16:21 CTLFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 7 16:21 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 24 05:37 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K Mar 24 05:37 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.0K Apr 14 12:41 LTLCardinality.txt
-rw-r--r-- 1 mcc users 28K Apr 28 14:01 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K Apr 14 12:41 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Apr 28 14:01 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K Apr 6 19:16 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 17K Apr 6 19:16 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.8K Apr 6 02:41 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 19K Apr 6 02:41 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Apr 6 20:24 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Apr 6 20:24 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 24 05:37 equiv_col
-rw-r--r-- 1 mcc users 6 Mar 24 05:37 instance
-rw-r--r-- 1 mcc users 6 Mar 24 05:37 iscolored
-rw-r--r-- 1 mcc users 25K Mar 24 05:37 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPK-PT-00008-CTLFireability-00
FORMULA_NAME MAPK-PT-00008-CTLFireability-01
FORMULA_NAME MAPK-PT-00008-CTLFireability-02
FORMULA_NAME MAPK-PT-00008-CTLFireability-03
FORMULA_NAME MAPK-PT-00008-CTLFireability-04
FORMULA_NAME MAPK-PT-00008-CTLFireability-05
FORMULA_NAME MAPK-PT-00008-CTLFireability-06
FORMULA_NAME MAPK-PT-00008-CTLFireability-07
FORMULA_NAME MAPK-PT-00008-CTLFireability-08
FORMULA_NAME MAPK-PT-00008-CTLFireability-09
FORMULA_NAME MAPK-PT-00008-CTLFireability-10
FORMULA_NAME MAPK-PT-00008-CTLFireability-11
FORMULA_NAME MAPK-PT-00008-CTLFireability-12
FORMULA_NAME MAPK-PT-00008-CTLFireability-13
FORMULA_NAME MAPK-PT-00008-CTLFireability-14
FORMULA_NAME MAPK-PT-00008-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1590685447145

[2020-05-28 17:04:09] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-28 17:04:09] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-28 17:04:09] [INFO ] Load time of PNML (sax parser for PT used): 39 ms
[2020-05-28 17:04:09] [INFO ] Transformed 22 places.
[2020-05-28 17:04:09] [INFO ] Transformed 30 transitions.
[2020-05-28 17:04:09] [INFO ] Parsed PT model containing 22 places and 30 transitions in 82 ms.
Parsed 16 properties from file /home/mcc/execution/CTLFireability.xml in 16 ms.
Finished random walk after 11872 steps, including 0 resets, run visited all 30 properties in 28 ms. (steps per millisecond=424 )
[2020-05-28 17:04:09] [INFO ] Initial state reduction rules for CTL removed 6 formulas.
[2020-05-28 17:04:09] [INFO ] Flatten gal took : 30 ms
[2020-05-28 17:04:09] [INFO ] Initial state reduction rules for CTL removed 6 formulas.
[2020-05-28 17:04:09] [INFO ] Flatten gal took : 7 ms
FORMULA MAPK-PT-00008-CTLFireability-15 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPK-PT-00008-CTLFireability-14 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPK-PT-00008-CTLFireability-11 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPK-PT-00008-CTLFireability-10 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPK-PT-00008-CTLFireability-09 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA MAPK-PT-00008-CTLFireability-08 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2020-05-28 17:04:09] [INFO ] Applying decomposition
[2020-05-28 17:04:09] [INFO ] Flatten gal took : 5 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph4364617834747462878.txt, -o, /tmp/graph4364617834747462878.bin, -w, /tmp/graph4364617834747462878.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph4364617834747462878.bin, -l, -1, -v, -w, /tmp/graph4364617834747462878.weights, -q, 0, -e, 0.001], workingDir=null]
[2020-05-28 17:04:09] [INFO ] Decomposing Gal with order
[2020-05-28 17:04:09] [INFO ] Rewriting arrays to variables to allow decomposition.
[2020-05-28 17:04:09] [INFO ] Removed a total of 7 redundant transitions.
[2020-05-28 17:04:09] [INFO ] Flatten gal took : 32 ms
[2020-05-28 17:04:09] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 1 ms.
[2020-05-28 17:04:09] [INFO ] Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 2 ms
[2020-05-28 17:04:09] [INFO ] Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 2 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 10 CTL formulae.
built 5 ordering constraints for composite.
built 7 ordering constraints for composite.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,6.11064e+06,0.117053,8716,551,200,11179,2487,82,9196,44,8112,0


Converting to forward existential form...Done !
original formula: EF(AG(AX(((u1.MEKPP>=1)&&(u1.ERK>=1)))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !(!(EX(!(((u1.MEKPP>=1)&&(u1.ERK>=1)))))))))] != FALSE
Reverse transition relation is exact ! Faster fixpoint algorithm enabled.
(forward)formula 0,0,0.27307,11476,1,0,14669,4313,300,16095,265,19019,16435
FORMULA MAPK-PT-00008-CTLFireability-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: EF(AG((u2.ERKP_Phase3>=1)))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !((u2.ERKP_Phase3>=1)))))] != FALSE
(forward)formula 1,0,0.276941,11740,1,0,14994,4349,303,16161,265,19137,16664
FORMULA MAPK-PT-00008-CTLFireability-01 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: (E(((u3.MEKP_Phase2<1)||(u2.ERKP_Phase3<1)) U AG((i0.u4.MEK_RafP>=1))) + (A((u3.MEKPP_Phase2>=1) U ((i0.u4.MEKP_RafP>=1)&&(i0.u0.RafP_Phase1>=1))) * E(((u2.ERKP_Phase3>=1)||(u1.ERK_MEKPP>=1)) U (i0.u4.MEK_RafP>=1))))
=> equivalent forward existential formula: ([(FwdU(Init,((u3.MEKP_Phase2<1)||(u2.ERKP_Phase3<1))) * !(E(TRUE U !((i0.u4.MEK_RafP>=1)))))] != FALSE + [(FwdU((Init * !((E(!(((i0.u4.MEKP_RafP>=1)&&(i0.u0.RafP_Phase1>=1))) U (!((u3.MEKPP_Phase2>=1)) * !(((i0.u4.MEKP_RafP>=1)&&(i0.u0.RafP_Phase1>=1))))) + EG(!(((i0.u4.MEKP_RafP>=1)&&(i0.u0.RafP_Phase1>=1))))))),((u2.ERKP_Phase3>=1)||(u1.ERK_MEKPP>=1))) * (i0.u4.MEK_RafP>=1))] != FALSE)
Using saturation style SCC detection
Fast SCC detection found a local SCC at level 1
Fast SCC detection found an SCC at level 2
Fast SCC detection found an SCC at level 3
Fast SCC detection found an SCC at level 4
(forward)formula 2,0,0.381809,15700,1,0,24854,5740,392,28306,269,26264,25937
FORMULA MAPK-PT-00008-CTLFireability-02 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: !(AG(!(AG((i0.u4.MEKP_RafP>=1)))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !((i0.u4.MEKP_RafP>=1)))))] != FALSE
(forward)formula 3,0,0.413225,16756,1,0,27262,5979,395,31339,270,28201,30211
FORMULA MAPK-PT-00008-CTLFireability-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: E((EF(((u3.MEKP>=1)&&(i0.u4.RafP>=1))) * (((i0.u4.MEK<1)||(i0.u4.RafP<1))||(((u3.MEKP_Phase2>=1)&&(u1.MEKPP>=1))&&(u1.ERK>=1)))) U (i0.u4.MEKP_RafP>=1))
=> equivalent forward existential formula: [(FwdU(Init,(E(TRUE U ((u3.MEKP>=1)&&(i0.u4.RafP>=1))) * (((i0.u4.MEK<1)||(i0.u4.RafP<1))||(((u3.MEKP_Phase2>=1)&&(u1.MEKPP>=1))&&(u1.ERK>=1))))) * (i0.u4.MEKP_RafP>=1))] != FALSE
(forward)formula 4,0,0.431509,17548,1,0,28306,6158,416,32814,273,29031,33907
FORMULA MAPK-PT-00008-CTLFireability-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: (E(((u2.ERKPP_Phase3>=1)||(u1.ERK_MEKPP<1)) U AG(((u2.ERKP>=1)&&(u2.Phase3>=1)))) + !(EF((((u2.ERKP_Phase3>=1)&&(u3.MEKP>=1))&&(i0.u4.RafP>=1)))))
=> equivalent forward existential formula: [(FwdU((Init * !(E(((u2.ERKPP_Phase3>=1)||(u1.ERK_MEKPP<1)) U !(E(TRUE U !(((u2.ERKP>=1)&&(u2.Phase3>=1)))))))),TRUE) * (((u2.ERKP_Phase3>=1)&&(u3.MEKP>=1))&&(i0.u4.RafP>=1)))] = FALSE
(forward)formula 5,0,0.50842,20452,1,0,34489,7217,516,38558,283,33043,48228
FORMULA MAPK-PT-00008-CTLFireability-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: EF((((u2.ERKP_Phase3>=1)&&(i0.u4.MEKP_RafP>=1))&&(((u2.ERKP>=1)&&(u1.MEKPP>=1))||((i0.u4.MEK>=1)&&(i0.u4.RafP>=1)))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * (((u2.ERKP_Phase3>=1)&&(i0.u4.MEKP_RafP>=1))&&(((u2.ERKP>=1)&&(u1.MEKPP>=1))||((i0.u4.MEK>=1)&&(i0.u4.RafP>=1)))))] != FALSE
(forward)formula 6,1,0.518287,20980,1,0,35652,7299,530,39585,285,33652,49653
FORMULA MAPK-PT-00008-CTLFireability-06 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: EX((AF(((i0.u0.RafP_Phase1>=1)||(u3.MEKPP_Phase2>=1))) + (((((u5.Raf_RasGTP>=1)&&(i0.u0.Phase1>=1))&&(i0.u4.RafP>=1))&&(u2.ERKP_Phase3>=1)) * AG((u5.Raf_RasGTP>=1)))))
=> equivalent forward existential formula: ([(EY(Init) * !(EG(!(((i0.u0.RafP_Phase1>=1)||(u3.MEKPP_Phase2>=1))))))] != FALSE + [((EY(Init) * ((((u5.Raf_RasGTP>=1)&&(i0.u0.Phase1>=1))&&(i0.u4.RafP>=1))&&(u2.ERKP_Phase3>=1))) * !(E(TRUE U !((u5.Raf_RasGTP>=1)))))] != FALSE)
(forward)formula 7,0,0.565654,23620,1,0,42409,7332,546,44929,285,33983,56612
FORMULA MAPK-PT-00008-CTLFireability-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: EX(((i0.u0.Phase1>=1)&&(i0.u4.RafP>=1)))
=> equivalent forward existential formula: [(EY(Init) * ((i0.u0.Phase1>=1)&&(i0.u4.RafP>=1)))] != FALSE
(forward)formula 8,0,0.566911,23620,1,0,42488,7332,552,44938,285,33991,57139
FORMULA MAPK-PT-00008-CTLFireability-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: AF((u5.Raf_RasGTP>=1))
=> equivalent forward existential formula: [FwdG(Init,!((u5.Raf_RasGTP>=1)))] = FALSE
(forward)formula 9,1,0.56722,23620,1,0,42488,7332,561,44940,285,33991,57150
FORMULA MAPK-PT-00008-CTLFireability-13 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************


BK_STOP 1590685450467

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPK-PT-00008"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is MAPK-PT-00008, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r111-csrt-158961257000004"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPK-PT-00008.tgz
mv MAPK-PT-00008 execution
cd execution
if [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "UpperBounds" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] || [ "CTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;