Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2020-input.r081-smll-158922978100529.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2020-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
.......................
=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is GPPP-PT-C1000N0000000010, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r081-smll-158922978100529
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 208K
-rw-r--r-- 1 mcc users 3.4K Apr 4 20:06 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K Apr 4 20:06 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.0K Apr 4 09:15 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K Apr 4 09:15 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 24 05:37 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.7K Mar 24 05:37 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.5K Apr 8 14:56 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Apr 28 14:01 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K Apr 8 14:56 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Apr 28 14:01 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K Apr 3 21:31 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Apr 3 21:31 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 4.0K Apr 3 13:51 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 20K Apr 3 13:51 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Apr 4 01:37 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Apr 4 01:37 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 24 05:37 equiv_col
-rw-r--r-- 1 mcc users 17 Mar 24 05:37 instance
-rw-r--r-- 1 mcc users 6 Mar 24 05:37 iscolored
-rw-r--r-- 1 mcc users 1 Mar 24 05:37 large_marking
-rw-r--r-- 1 mcc users 21K Mar 24 05:37 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C1000N0000000010-00
FORMULA_NAME GPPP-PT-C1000N0000000010-01
FORMULA_NAME GPPP-PT-C1000N0000000010-02
FORMULA_NAME GPPP-PT-C1000N0000000010-03
FORMULA_NAME GPPP-PT-C1000N0000000010-04
FORMULA_NAME GPPP-PT-C1000N0000000010-05
FORMULA_NAME GPPP-PT-C1000N0000000010-06
FORMULA_NAME GPPP-PT-C1000N0000000010-07
FORMULA_NAME GPPP-PT-C1000N0000000010-08
FORMULA_NAME GPPP-PT-C1000N0000000010-09
FORMULA_NAME GPPP-PT-C1000N0000000010-10
FORMULA_NAME GPPP-PT-C1000N0000000010-11
FORMULA_NAME GPPP-PT-C1000N0000000010-12
FORMULA_NAME GPPP-PT-C1000N0000000010-13
FORMULA_NAME GPPP-PT-C1000N0000000010-14
FORMULA_NAME GPPP-PT-C1000N0000000010-15

=== Now, execution of the tool begins

BK_START 1589800534640

[2020-05-18 11:15:37] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-18 11:15:37] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-18 11:15:37] [INFO ] Load time of PNML (sax parser for PT used): 44 ms
[2020-05-18 11:15:37] [INFO ] Transformed 33 places.
[2020-05-18 11:15:37] [INFO ] Transformed 22 transitions.
[2020-05-18 11:15:37] [INFO ] Parsed PT model containing 33 places and 22 transitions in 102 ms.
Parsed 16 properties from file /home/mcc/execution/LTLCardinality.xml in 23 ms.
Working with output stream class java.io.PrintStream
Incomplete random walk after 100000 steps, including 231 resets, run finished after 298 ms. (steps per millisecond=335 ) properties seen :[0, 0, 0, 1, 1, 0, 1, 0, 1, 1, 1, 1, 0, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 0, 1, 1, 1, 1, 0, 1, 0, 1, 0]
// Phase 1: matrix 22 rows 33 cols
[2020-05-18 11:15:38] [INFO ] Invariants computation overflowed in 8 ms
[2020-05-18 11:15:38] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Real]Absence check using state equation in 29 ms returned unsat
[2020-05-18 11:15:38] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Real]Absence check using state equation in 46 ms returned sat
[2020-05-18 11:15:38] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 11:15:38] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Nat]Absence check using state equation in 80 ms returned unsat
[2020-05-18 11:15:38] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Real]Absence check using state equation in 12 ms returned unsat
[2020-05-18 11:15:38] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Real]Absence check using state equation in 13 ms returned unsat
[2020-05-18 11:15:38] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Real]Absence check using state equation in 30 ms returned sat
[2020-05-18 11:15:38] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 11:15:38] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Nat]Absence check using state equation in 42 ms returned unsat
[2020-05-18 11:15:38] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Real]Absence check using state equation in 8 ms returned unsat
[2020-05-18 11:15:38] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Real]Absence check using state equation in 11 ms returned unsat
[2020-05-18 11:15:38] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:38] [INFO ] [Real]Absence check using state equation in 27 ms returned sat
[2020-05-18 11:15:38] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 11:15:38] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:39] [INFO ] [Nat]Absence check using state equation in 278 ms returned sat
[2020-05-18 11:15:39] [INFO ] Computed and/alt/rep : 21/49/21 causal constraints in 10 ms.
[2020-05-18 11:15:39] [INFO ] Added : 18 causal constraints over 4 iterations in 52 ms. Result :sat
[2020-05-18 11:15:39] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:39] [INFO ] [Real]Absence check using state equation in 31 ms returned sat
[2020-05-18 11:15:39] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 11:15:39] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:39] [INFO ] [Nat]Absence check using state equation in 43 ms returned unsat
[2020-05-18 11:15:39] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:39] [INFO ] [Real]Absence check using state equation in 25 ms returned sat
[2020-05-18 11:15:39] [INFO ] Solution in real domain found non-integer solution.
[2020-05-18 11:15:39] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:39] [INFO ] [Nat]Absence check using state equation in 36 ms returned unsat
[2020-05-18 11:15:39] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:39] [INFO ] [Real]Absence check using state equation in 21 ms returned unsat
[2020-05-18 11:15:39] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-18 11:15:39] [INFO ] [Real]Absence check using state equation in 8 ms returned unsat
Successfully simplified 11 atomic propositions for a total of 13 simplifications.
[2020-05-18 11:15:39] [INFO ] Initial state reduction rules for CTL removed 8 formulas.
[2020-05-18 11:15:39] [INFO ] Flatten gal took : 54 ms
FORMULA GPPP-PT-C1000N0000000010-15 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C1000N0000000010-14 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C1000N0000000010-12 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C1000N0000000010-11 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C1000N0000000010-10 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C1000N0000000010-04 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C1000N0000000010-01 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C1000N0000000010-00 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2020-05-18 11:15:39] [INFO ] Flatten gal took : 15 ms
Using solver Z3 to compute partial order matrices.
[2020-05-18 11:15:39] [INFO ] Applying decomposition
Built C files in :
/home/mcc/execution
[2020-05-18 11:15:39] [INFO ] Flatten gal took : 40 ms
[2020-05-18 11:15:40] [INFO ] Input system was already deterministic with 22 transitions.
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 22 rows 33 cols
[2020-05-18 11:15:40] [INFO ] Invariants computation overflowed in 3 ms
Total of 0 invariants.
[2020-05-18 11:15:40] [INFO ] Computed 0 place invariants in 5 ms
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph2660791712764027429.txt, -o, /tmp/graph2660791712764027429.bin, -w, /tmp/graph2660791712764027429.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph2660791712764027429.bin, -l, -1, -v, -w, /tmp/graph2660791712764027429.weights, -q, 0, -e, 0.001], workingDir=null]
[2020-05-18 11:15:40] [INFO ] Decomposing Gal with order
[2020-05-18 11:15:40] [INFO ] Rewriting arrays to variables to allow decomposition.
[2020-05-18 11:15:40] [INFO ] Proved 33 variables to be positive in 146 ms
[2020-05-18 11:15:40] [INFO ] Computing symmetric may disable matrix : 22 transitions.
[2020-05-18 11:15:40] [INFO ] Computation of disable matrix completed :0/22 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-18 11:15:40] [INFO ] Computation of Complete disable matrix. took 1 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-18 11:15:40] [INFO ] Computing symmetric may enable matrix : 22 transitions.
[2020-05-18 11:15:40] [INFO ] Computation of Complete enable matrix. took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-18 11:15:40] [INFO ] Removed a total of 7 redundant transitions.
[2020-05-18 11:15:40] [INFO ] Flatten gal took : 98 ms
[2020-05-18 11:15:40] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 15 ms.
[2020-05-18 11:15:40] [INFO ] Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 4 ms
[2020-05-18 11:15:40] [INFO ] Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 9 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock --gen-order FOLLOW
Read 8 LTL properties
Checking formula 0 : !((!(G(F("(gu7.Pi<=gu7.Gluc)")))))
Formula 0 simplified : GF"(gu7.Pi<=gu7.Gluc)"
[2020-05-18 11:15:41] [INFO ] Computing symmetric co enabling matrix : 22 transitions.
[2020-05-18 11:15:41] [INFO ] Computation of Finished co-enabling matrix. took 415 ms. Total solver calls (SAT/UNSAT): 10(10/0)
[2020-05-18 11:15:41] [INFO ] Computing Do-Not-Accords matrix : 22 transitions.
[2020-05-18 11:15:42] [INFO ] Computation of Completed DNA matrix. took 324 ms. Total solver calls (SAT/UNSAT): 51(0/51)
[2020-05-18 11:15:42] [INFO ] Built C files in 2044ms conformant to PINS in folder :/home/mcc/execution
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
Compilation finished in 651 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 56 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, !( [](<>((LTLAP0==true)))) , --buchi-type=spotba], workingDir=/home/mcc/execution]
/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc: error while loading shared libraries: libltdl.so.7: cannot open shared object file: No such file or directory
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, !( [](<>((LTLAP0==true)))) , --buchi-type=spotba], workingDir=/home/mcc/execution]
127
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, !( [](<>((LTLAP0==true)))) , --buchi-type=spotba], workingDir=/home/mcc/execution]
127
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:170)
at fr.lip6.move.gal.application.LTSminRunner.access$10(LTSminRunner.java:124)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:93)
at java.base/java.lang.Thread.run(Thread.java:834)
Reverse transition relation is NOT exact ! Due to transitions gu5.Glutathione_oxidation, Transketolase2, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :1/19/2/22
Computing Next relation with stutter on 4 deadlock states
1 unique states visited
0 strongly connected components in search stack
0 transitions explored
1 items max in DFS search stack
91558 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,915.603,3354244,1,0,698,1.6478e+07,20,1075,1118,2.15824e+07,3184
no accepting run found
Formula 0 is TRUE no accepting run found.
FORMULA GPPP-PT-C1000N0000000010-02 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 1 : !((!(F(G("(gu4.GAP<=gu4.G6P)")))))
Formula 1 simplified : FG"(gu4.GAP<=gu4.G6P)"
Computing Next relation with stutter on 4 deadlock states
280 unique states visited
280 strongly connected components in search stack
281 transitions explored
280 items max in DFS search stack
10146 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1017.07,3509216,1,0,1352,1.6478e+07,35,1732,1463,2.15824e+07,5663
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA GPPP-PT-C1000N0000000010-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 2 : !((!(X(X((F(X("((gu5.S7P<=gu5.GSSG)&&(gu5.GSSG>=3))")))&&("(gu5.F6P<=gu5.S7P)"))))))
Formula 2 simplified : XX("(gu5.F6P<=gu5.S7P)" & FX"((gu5.S7P<=gu5.GSSG)&&(gu5.GSSG>=3))")
Computing Next relation with stutter on 4 deadlock states
6 unique states visited
6 strongly connected components in search stack
6 transitions explored
6 items max in DFS search stack
11 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1017.18,3510208,1,0,1355,1.6478e+07,46,1735,1475,2.15824e+07,5684
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA GPPP-PT-C1000N0000000010-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 3 : !((!(F(G(((G((X("(gu3.NADPH<=gu3.Lac)"))U(G(X("(gu3.NADPH<=gu3.Lac)")))))U("(gi5.gu9.R5P>=1)"))&&("(gi6.gu2.Pyr<=gi6.gu2.NADPplus)"))))))
Formula 3 simplified : FG("(gi6.gu2.Pyr<=gi6.gu2.NADPplus)" & (G(X"(gu3.NADPH<=gu3.Lac)" U GX"(gu3.NADPH<=gu3.Lac)") U "(gi5.gu9.R5P>=1)"))
Computing Next relation with stutter on 4 deadlock states
Detected timeout of ITS tools.
[2020-05-18 11:35:40] [INFO ] Flatten gal took : 4 ms
[2020-05-18 11:35:40] [INFO ] Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 2 ms
[2020-05-18 11:35:40] [INFO ] Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock --gen-order FOLLOW
Read 5 LTL properties
Checking formula 0 : !((!(F(G(((G((X("(NADPH<=Lac)"))U(G(X("(NADPH<=Lac)")))))U("(R5P>=1)"))&&("(Pyr<=NADPplus)"))))))
Formula 0 simplified : FG("(Pyr<=NADPplus)" & (G(X"(NADPH<=Lac)" U GX"(NADPH<=Lac)") U "(R5P>=1)"))
Detected timeout of ITS tools.
[2020-05-18 11:55:42] [INFO ] Flatten gal took : 449 ms
[2020-05-18 11:55:43] [INFO ] Input system was already deterministic with 22 transitions.
[2020-05-18 11:55:43] [INFO ] Transformed 33 places.
[2020-05-18 11:55:43] [INFO ] Transformed 22 transitions.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2020-05-18 11:55:43] [INFO ] Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 12 ms
[2020-05-18 11:55:43] [INFO ] Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 4 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock, --load-order, /home/mcc/execution/model.ord, --gen-order, FOLLOW], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock --load-order /home/mcc/execution/model.ord --gen-order FOLLOW
Read 5 LTL properties
Successfully loaded order from file /home/mcc/execution/model.ord
Checking formula 0 : !((!(F(G(((G((X("(NADPH<=Lac)"))U(G(X("(NADPH<=Lac)")))))U("(R5P>=1)"))&&("(Pyr<=NADPplus)"))))))
Formula 0 simplified : FG("(Pyr<=NADPplus)" & (G(X"(NADPH<=Lac)" U GX"(NADPH<=Lac)") U "(R5P>=1)"))
Reverse transition relation is NOT exact ! Due to transitions t8, t13, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :1/19/2/22
Computing Next relation with stutter on 4 deadlock states
279 unique states visited
279 strongly connected components in search stack
280 transitions explored
279 items max in DFS search stack
7212 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,72.1496,1350336,1,0,1274,6.79856e+06,83,1195,1798,8.36405e+06,3770
an accepting run exists (use option '-e' to print it)
Formula 0 is FALSE accepting run found.
FORMULA GPPP-PT-C1000N0000000010-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 1 : !((!(F(X("(_3PG<=_2PG)")))))
Formula 1 simplified : FX"(_3PG<=_2PG)"
Computing Next relation with stutter on 4 deadlock states
4 unique states visited
4 strongly connected components in search stack
4 transitions explored
4 items max in DFS search stack
4 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,72.1877,1351680,1,0,1275,6.79888e+06,91,1197,1802,8.36436e+06,3786
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA GPPP-PT-C1000N0000000010-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 2 : !((F(((X(F(G((G("(Ru5P>=1)"))U("(E4P<=ATP)")))))U("(Ru5P>=1)"))||("(b1<=Xu5P)"))))
Formula 2 simplified : !F("(b1<=Xu5P)" | (XFG(G"(Ru5P>=1)" U "(E4P<=ATP)") U "(Ru5P>=1)"))
Computing Next relation with stutter on 4 deadlock states
1 unique states visited
0 strongly connected components in search stack
0 transitions explored
1 items max in DFS search stack
3 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,72.2184,1352260,1,0,1478,6.80069e+06,104,1322,1809,8.36743e+06,4204
no accepting run found
Formula 2 is TRUE no accepting run found.
FORMULA GPPP-PT-C1000N0000000010-08 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 3 : !(((X(X(G("((G6P>=2)&&(GAP>G6P))"))))&&((F((X("(GSH>=3)"))U("(GAP<=G6P)")))U("(GAP<=G6P)"))))
Formula 3 simplified : !(XXG"((G6P>=2)&&(GAP>G6P))" & (F(X"(GSH>=3)" U "(GAP<=G6P)") U "(GAP<=G6P)"))
Computing Next relation with stutter on 4 deadlock states
5 unique states visited
5 strongly connected components in search stack
5 transitions explored
5 items max in DFS search stack
1 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,72.2336,1352428,1,0,1479,6.80108e+06,113,1323,1820,8.36782e+06,4217
an accepting run exists (use option '-e' to print it)
Formula 3 is FALSE accepting run found.
FORMULA GPPP-PT-C1000N0000000010-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 4 : !(((!((G((X("(b1>=2)"))&&("(E4P<=Xu5P)")))U(G(!(G("(b1>=2)"))))))&&(X("(b1>=2)"))))
Formula 4 simplified : !(X"(b1>=2)" & !(G("(E4P<=Xu5P)" & X"(b1>=2)") U G!G"(b1>=2)"))
Computing Next relation with stutter on 4 deadlock states
4 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
73872 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,810.954,3657532,1,0,1725,2.06154e+07,18,1759,1094,2.31131e+07,858
an accepting run exists (use option '-e' to print it)
Formula 4 is FALSE accepting run found.
FORMULA GPPP-PT-C1000N0000000010-13 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL

BK_STOP 1589803761359

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C1000N0000000010"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is GPPP-PT-C1000N0000000010, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r081-smll-158922978100529"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C1000N0000000010.tgz
mv GPPP-PT-C1000N0000000010 execution
cd execution
if [ "LTLCardinality" = "ReachabilityDeadlock" ] || [ "LTLCardinality" = "UpperBounds" ] || [ "LTLCardinality" = "QuasiLiveness" ] || [ "LTLCardinality" = "StableMarking" ] || [ "LTLCardinality" = "Liveness" ] || [ "LTLCardinality" = "OneSafe" ] || [ "LTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "LTLCardinality" = "ReachabilityDeadlock" ] || [ "LTLCardinality" = "QuasiLiveness" ] || [ "LTLCardinality" = "StableMarking" ] || [ "LTLCardinality" = "Liveness" ] || [ "LTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME LTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;