About the Execution of ITS-Tools for CircadianClock-PT-000100
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/data/fkordon/mcc2020-input.r036-smll-158901930500021.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2020-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is CircadianClock-PT-000100, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r036-smll-158901930500021
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 184K
-rw-r--r-- 1 mcc users 3.5K Mar 30 00:59 CTLCardinality.txt
-rw-r--r-- 1 mcc users 20K Mar 30 00:59 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K Mar 28 15:16 CTLFireability.txt
-rw-r--r-- 1 mcc users 16K Mar 28 15:16 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 24 05:37 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.3K Apr 8 14:44 LTLCardinality.txt
-rw-r--r-- 1 mcc users 22K Apr 28 14:00 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Apr 8 14:44 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Apr 28 14:00 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K Mar 27 08:12 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Mar 27 08:12 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 3.4K Mar 26 07:34 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 21K Mar 26 07:34 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Mar 28 14:49 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Mar 28 14:49 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 24 05:37 equiv_col
-rw-r--r-- 1 mcc users 7 Mar 24 05:37 instance
-rw-r--r-- 1 mcc users 6 Mar 24 05:37 iscolored
-rw-r--r-- 1 mcc users 11K Mar 24 05:37 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of positive values
NUM_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-00
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-01
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-02
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-03
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-04
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-05
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-06
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-07
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-08
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-09
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-10
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-11
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-12
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-13
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-14
FORMULA_NAME CircadianClock-PT-000100-UpperBounds-15
=== Now, execution of the tool begins
BK_START 1589642625191
[2020-05-16 15:23:48] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-16 15:23:48] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-16 15:23:48] [INFO ] Load time of PNML (sax parser for PT used): 55 ms
[2020-05-16 15:23:48] [INFO ] Transformed 14 places.
[2020-05-16 15:23:48] [INFO ] Transformed 16 transitions.
[2020-05-16 15:23:48] [INFO ] Parsed PT model containing 14 places and 16 transitions in 132 ms.
Parsed 16 properties from file /home/mcc/execution/UpperBounds.xml in 20 ms.
Finished random walk after 0 steps, including 0 resets, run visited all 0 properties in 1 ms. (steps per millisecond=0 )
[2020-05-16 15:23:48] [INFO ] Flatten gal took : 40 ms
[2020-05-16 15:23:48] [INFO ] Applying decomposition
[2020-05-16 15:23:48] [INFO ] Flatten gal took : 7 ms
[2020-05-16 15:23:48] [INFO ] Time to serialize gal into /home/mcc/execution/UpperBounds.pnml.gal : 8 ms
[2020-05-16 15:23:48] [INFO ] Time to serialize properties into /home/mcc/execution/UpperBounds.prop : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/UpperBounds.pnml.gal, -t, CGAL, -reachable-file, UpperBounds.prop, --nowitness, --gen-order, FOLLOW], workingDir=/home/mcc/execution]
its-reach command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/UpperBounds.pnml.gal -t CGAL -reachable-file UpperBounds.prop --nowitness --gen-order FOLLOW
Loading property file UpperBounds.prop.
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-00 with value :c_cap
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-01 with value :da
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-02 with value :r
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-03 with value :a
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-04 with value :a
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-05 with value :da_a
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-06 with value :a
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-07 with value :a
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-08 with value :dr_a
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-09 with value :a_cap
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-10 with value :a
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-11 with value :c
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-12 with value :ma_cap
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-13 with value :da_a
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-14 with value :dr_a
Read [bounds] property : CircadianClock-PT-000100-UpperBounds-15 with value :da_a
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst,4.20404e+10,2.19645,43432,2,517,5,235094,6,0,75,262885,0
Total reachable state count : 42040402004
Verifying 16 reachability properties.
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-00 :0 <= c_cap <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-00 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-00,0,2.19747,43432,1,0,7,235094,9,1,203,262885,4
Min sum of variable value : 0
Maximum sum along a path : 1
Bounds property CircadianClock-PT-000100-UpperBounds-01 :0 <= da <= 1
FORMULA CircadianClock-PT-000100-UpperBounds-01 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-01,0,2.19822,43432,1,0,8,235094,10,1,230,262885,5
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-02 :0 <= r <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-02 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-02,0,2.19894,43432,1,0,9,235094,11,1,340,262885,6
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-03 :0 <= a <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-03 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-03,0,2.20015,43432,1,0,10,235094,12,1,469,262885,7
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-04 :0 <= a <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-04 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-04,0,2.20024,43432,1,0,10,235094,12,1,469,262885,7
Min sum of variable value : 0
Maximum sum along a path : 1
Bounds property CircadianClock-PT-000100-UpperBounds-05 :0 <= da_a <= 1
FORMULA CircadianClock-PT-000100-UpperBounds-05 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-05,0,2.20092,43432,1,0,11,235094,13,1,494,262885,8
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-06 :0 <= a <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-06 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-06,0,2.201,43432,1,0,11,235094,13,1,494,262885,8
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-07 :0 <= a <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-07 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-07,0,2.20106,43432,1,0,11,235094,13,1,494,262885,8
Min sum of variable value : 0
Maximum sum along a path : 1
Bounds property CircadianClock-PT-000100-UpperBounds-08 :0 <= dr_a <= 1
FORMULA CircadianClock-PT-000100-UpperBounds-08 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-08,0,2.20169,43432,1,0,12,235094,14,1,515,262885,9
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-09 :0 <= a_cap <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-09 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-09,0,2.20269,43432,1,0,13,235094,15,1,643,262885,10
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-10 :0 <= a <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-10 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-10,0,2.20277,43432,1,0,13,235094,15,1,643,262885,10
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-11 :0 <= c <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-11 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-11,0,2.20372,43432,1,0,14,235094,16,1,757,262885,11
Min sum of variable value : 0
Maximum sum along a path : 100
Bounds property CircadianClock-PT-000100-UpperBounds-12 :0 <= ma_cap <= 100
FORMULA CircadianClock-PT-000100-UpperBounds-12 100 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-12,0,2.20468,43432,1,0,15,235094,17,1,873,262885,12
Min sum of variable value : 0
Maximum sum along a path : 1
Bounds property CircadianClock-PT-000100-UpperBounds-13 :0 <= da_a <= 1
FORMULA CircadianClock-PT-000100-UpperBounds-13 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-13,0,2.20478,43432,1,0,15,235094,17,1,873,262885,12
Min sum of variable value : 0
Maximum sum along a path : 1
Bounds property CircadianClock-PT-000100-UpperBounds-14 :0 <= dr_a <= 1
FORMULA CircadianClock-PT-000100-UpperBounds-14 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-14,0,2.20485,43432,1,0,15,235094,17,1,873,262885,12
Min sum of variable value : 0
Maximum sum along a path : 1
Bounds property CircadianClock-PT-000100-UpperBounds-15 :0 <= da_a <= 1
FORMULA CircadianClock-PT-000100-UpperBounds-15 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
CircadianClock-PT-000100-UpperBounds-15,0,2.20491,43432,1,0,15,235094,17,1,873,262885,12
BK_STOP 1589642632272
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ UpperBounds = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="CircadianClock-PT-000100"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is CircadianClock-PT-000100, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r036-smll-158901930500021"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/CircadianClock-PT-000100.tgz
mv CircadianClock-PT-000100 execution
cd execution
if [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "UpperBounds" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] || [ "UpperBounds" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] ; then
echo "FORMULA_NAME UpperBounds"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;