About the Execution of ITS-Tools for Angiogenesis-PT-15
| Execution Summary | |||||
| Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
| 15743.130 | 3600000.00 | 3650794.00 | 9079.40 | F??????FF??????? | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/data/fkordon/mcc2020-input.r006-smll-158897515900342.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2020-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is Angiogenesis-PT-15, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r006-smll-158897515900342
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 224K
-rw-r--r-- 1 mcc users 4.0K Apr 28 14:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 21K Apr 28 14:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Apr 28 14:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K Apr 28 14:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 28 14:22 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K Apr 28 14:22 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.1K Apr 28 14:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K Apr 28 14:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K Apr 28 14:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K Apr 28 14:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.5K Apr 28 14:22 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 21K Apr 28 14:22 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.7K Apr 28 14:22 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 28 14:22 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Apr 28 14:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Apr 28 14:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 equiv_col
-rw-r--r-- 1 mcc users 3 Apr 28 14:22 instance
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 iscolored
-rw-r--r-- 1 mcc users 33K Apr 28 14:22 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-15-00
FORMULA_NAME Angiogenesis-PT-15-01
FORMULA_NAME Angiogenesis-PT-15-02
FORMULA_NAME Angiogenesis-PT-15-03
FORMULA_NAME Angiogenesis-PT-15-04
FORMULA_NAME Angiogenesis-PT-15-05
FORMULA_NAME Angiogenesis-PT-15-06
FORMULA_NAME Angiogenesis-PT-15-07
FORMULA_NAME Angiogenesis-PT-15-08
FORMULA_NAME Angiogenesis-PT-15-09
FORMULA_NAME Angiogenesis-PT-15-10
FORMULA_NAME Angiogenesis-PT-15-11
FORMULA_NAME Angiogenesis-PT-15-12
FORMULA_NAME Angiogenesis-PT-15-13
FORMULA_NAME Angiogenesis-PT-15-14
FORMULA_NAME Angiogenesis-PT-15-15
=== Now, execution of the tool begins
BK_START 1589494099099
[2020-05-14 22:08:21] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-14 22:08:21] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-14 22:08:22] [INFO ] Load time of PNML (sax parser for PT used): 78 ms
[2020-05-14 22:08:22] [INFO ] Transformed 39 places.
[2020-05-14 22:08:22] [INFO ] Transformed 64 transitions.
[2020-05-14 22:08:22] [INFO ] Parsed PT model containing 39 places and 64 transitions in 158 ms.
Parsed 16 properties from file /home/mcc/execution/LTLFireability.xml in 33 ms.
Working with output stream class java.io.PrintStream
Incomplete random walk after 100000 steps, including 1 resets, run finished after 321 ms. (steps per millisecond=311 ) properties seen :[0, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 0]
// Phase 1: matrix 64 rows 39 cols
[2020-05-14 22:08:22] [INFO ] Computed 8 place invariants in 9 ms
[2020-05-14 22:08:22] [INFO ] [Real]Absence check using 8 positive place invariants in 26 ms returned sat
[2020-05-14 22:08:22] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:22] [INFO ] [Real]Absence check using state equation in 73 ms returned sat
[2020-05-14 22:08:22] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 18 ms.
[2020-05-14 22:08:22] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 22:08:22] [INFO ] [Nat]Absence check using 8 positive place invariants in 16 ms returned sat
[2020-05-14 22:08:22] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:22] [INFO ] [Nat]Absence check using state equation in 53 ms returned sat
[2020-05-14 22:08:22] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 14 ms.
[2020-05-14 22:08:23] [INFO ] Added : 59 causal constraints over 12 iterations in 185 ms. Result :sat
[2020-05-14 22:08:23] [INFO ] [Real]Absence check using 8 positive place invariants in 5 ms returned sat
[2020-05-14 22:08:23] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:23] [INFO ] [Real]Absence check using state equation in 51 ms returned sat
[2020-05-14 22:08:23] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 20 ms.
[2020-05-14 22:08:23] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 22:08:23] [INFO ] [Nat]Absence check using 8 positive place invariants in 9 ms returned sat
[2020-05-14 22:08:23] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:23] [INFO ] [Nat]Absence check using state equation in 43 ms returned sat
[2020-05-14 22:08:23] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 11 ms.
[2020-05-14 22:08:23] [INFO ] Added : 58 causal constraints over 14 iterations in 166 ms. Result :sat
[2020-05-14 22:08:23] [INFO ] [Real]Absence check using 8 positive place invariants in 7 ms returned sat
[2020-05-14 22:08:23] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:23] [INFO ] [Real]Absence check using state equation in 41 ms returned sat
[2020-05-14 22:08:23] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 12 ms.
[2020-05-14 22:08:23] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 22:08:23] [INFO ] [Nat]Absence check using 8 positive place invariants in 7 ms returned sat
[2020-05-14 22:08:23] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:23] [INFO ] [Nat]Absence check using state equation in 28 ms returned sat
[2020-05-14 22:08:23] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 9 ms.
[2020-05-14 22:08:23] [INFO ] Added : 58 causal constraints over 12 iterations in 143 ms. Result :sat
[2020-05-14 22:08:23] [INFO ] [Real]Absence check using 8 positive place invariants in 6 ms returned sat
[2020-05-14 22:08:23] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:23] [INFO ] [Real]Absence check using state equation in 37 ms returned sat
[2020-05-14 22:08:23] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 8 ms.
[2020-05-14 22:08:23] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 22:08:23] [INFO ] [Nat]Absence check using 8 positive place invariants in 6 ms returned sat
[2020-05-14 22:08:23] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:23] [INFO ] [Nat]Absence check using state equation in 42 ms returned sat
[2020-05-14 22:08:23] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 5 ms.
[2020-05-14 22:08:24] [INFO ] Added : 52 causal constraints over 11 iterations in 130 ms. Result :sat
[2020-05-14 22:08:24] [INFO ] [Real]Absence check using 8 positive place invariants in 4 ms returned sat
[2020-05-14 22:08:24] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:24] [INFO ] [Real]Absence check using state equation in 29 ms returned sat
[2020-05-14 22:08:24] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 9 ms.
[2020-05-14 22:08:24] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 22:08:24] [INFO ] [Nat]Absence check using 8 positive place invariants in 8 ms returned sat
[2020-05-14 22:08:24] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 22:08:24] [INFO ] [Nat]Absence check using state equation in 34 ms returned sat
[2020-05-14 22:08:24] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 7 ms.
[2020-05-14 22:08:24] [INFO ] Added : 57 causal constraints over 12 iterations in 122 ms. Result :sat
[2020-05-14 22:08:24] [INFO ] Initial state reduction rules for CTL removed 3 formulas.
[2020-05-14 22:08:24] [INFO ] Flatten gal took : 62 ms
FORMULA Angiogenesis-PT-15-08 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-15-07 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-15-00 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2020-05-14 22:08:24] [INFO ] Flatten gal took : 14 ms
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
[2020-05-14 22:08:24] [INFO ] Applying decomposition
[2020-05-14 22:08:24] [INFO ] Flatten gal took : 28 ms
[2020-05-14 22:08:24] [INFO ] Input system was already deterministic with 64 transitions.
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph3310377073058461197.txt, -o, /tmp/graph3310377073058461197.bin, -w, /tmp/graph3310377073058461197.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph3310377073058461197.bin, -l, -1, -v, -w, /tmp/graph3310377073058461197.weights, -q, 0, -e, 0.001], workingDir=null]
[2020-05-14 22:08:24] [INFO ] Decomposing Gal with order
[2020-05-14 22:08:24] [INFO ] Rewriting arrays to variables to allow decomposition.
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 64 rows 39 cols
[2020-05-14 22:08:24] [INFO ] Computed 8 place invariants in 2 ms
inv : KdStar + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 = 15
inv : Gab1 + GP3 + GStarP3 + GStarP3kP3 + GStarPgP3 + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 = 15
inv : DAGE + Enz = 15
inv : GStarPgP3 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 + Pg = 15
inv : Pten + PtP2 + PtP3 + PtP3P2 = 15
inv : AktP3 + DAG + DAGE + GP3 + GStarP3 + GStarP3kP3 + GStarPgP3 + KdStarGP3 + KdStarGStarP3 + KdStarGStarP3kP3 + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + 2*KdStarGStarP3kStarP3P2 + KdStarGStarPgP3 + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + 2*KdStarGStarPgStarP3P2 + KdStarPgStarP2 + Pip2 + Pip3 + PtP2 + PtP3 + 2*PtP3P2 = 15
inv : Akt + AktP3 + AktStar = 15
inv : GStarP3kP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + P3k = 15
Total of 8 invariants.
[2020-05-14 22:08:24] [INFO ] Computed 8 place invariants in 3 ms
[2020-05-14 22:08:24] [INFO ] Removed a total of 41 redundant transitions.
[2020-05-14 22:08:24] [INFO ] Flatten gal took : 50 ms
[2020-05-14 22:08:24] [INFO ] Fuse similar labels procedure discarded/fused a total of 10 labels/synchronizations in 20 ms.
[2020-05-14 22:08:25] [INFO ] Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 9 ms
[2020-05-14 22:08:25] [INFO ] Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 5 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]
[2020-05-14 22:08:25] [INFO ] Proved 39 variables to be positive in 172 ms
[2020-05-14 22:08:25] [INFO ] Computing symmetric may disable matrix : 64 transitions.
[2020-05-14 22:08:25] [INFO ] Computation of disable matrix completed :0/64 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-14 22:08:25] [INFO ] Computation of Complete disable matrix. took 3 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-14 22:08:25] [INFO ] Computing symmetric may enable matrix : 64 transitions.
[2020-05-14 22:08:25] [INFO ] Computation of Complete enable matrix. took 2 ms. Total solver calls (SAT/UNSAT): 0(0/0)
its-ltl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 13 LTL properties
Checking formula 0 : !(((G(((G("((i2.u8.KdStarGStarPgStar>=1)&&(i5.u13.Pip2>=1))"))&&("(i2.u8.KdStarGStarPgStar>=1)"))&&("(i5.u13.Pip2>=1)")))||(F(((F("((i4.u5.GStarP3>=1)&&(i4.u11.P3k>=1))"))&&("(i0.u3.GP3>=1)"))&&("(i0.u2.KdStar>=1)")))))
Formula 0 simplified : !(G("(i2.u8.KdStarGStarPgStar>=1)" & "(i5.u13.Pip2>=1)" & G"((i2.u8.KdStarGStarPgStar>=1)&&(i5.u13.Pip2>=1))") | F("(i0.u2.KdStar>=1)" & "(i0.u3.GP3>=1)" & F"((i4.u5.GStarP3>=1)&&(i4.u11.P3k>=1))"))
built 15 ordering constraints for composite.
built 7 ordering constraints for composite.
built 13 ordering constraints for composite.
built 7 ordering constraints for composite.
built 12 ordering constraints for composite.
built 16 ordering constraints for composite.
built 7 ordering constraints for composite.
[2020-05-14 22:08:26] [INFO ] Computing symmetric co enabling matrix : 64 transitions.
[2020-05-14 22:08:28] [INFO ] Computation of co-enabling matrix(5/64) took 1392 ms. Total solver calls (SAT/UNSAT): 329(329/0)
[2020-05-14 22:08:31] [INFO ] Computation of co-enabling matrix(23/64) took 4416 ms. Total solver calls (SAT/UNSAT): 1131(1131/0)
[2020-05-14 22:08:34] [INFO ] Computation of co-enabling matrix(48/64) took 7417 ms. Total solver calls (SAT/UNSAT): 1731(1731/0)
[2020-05-14 22:08:34] [INFO ] Computation of Finished co-enabling matrix. took 8237 ms. Total solver calls (SAT/UNSAT): 1836(1836/0)
[2020-05-14 22:08:34] [INFO ] Computing Do-Not-Accords matrix : 64 transitions.
[2020-05-14 22:08:39] [INFO ] Computation of Completed DNA matrix. took 4201 ms. Total solver calls (SAT/UNSAT): 371(0/371)
[2020-05-14 22:08:39] [INFO ] Built C files in 14455ms conformant to PINS in folder :/home/mcc/execution
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
Compilation finished in 1982 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 51 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, ( [](( ( []((LTLAP0==true)) ) && ( (LTLAP1==true) ) ) && ( (LTLAP2==true) ))) || ( <>(( ( <>((LTLAP3==true)) ) && ( (LTLAP4==true) ) ) && ( (LTLAP5==true) ))) , --buchi-type=spotba], workingDir=/home/mcc/execution]
/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc: error while loading shared libraries: libltdl.so.7: cannot open shared object file: No such file or directory
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, ( [](( ( []((LTLAP0==true)) ) && ( (LTLAP1==true) ) ) && ( (LTLAP2==true) ))) || ( <>(( ( <>((LTLAP3==true)) ) && ( (LTLAP4==true) ) ) && ( (LTLAP5==true) ))) , --buchi-type=spotba], workingDir=/home/mcc/execution]
127
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, ( [](( ( []((LTLAP0==true)) ) && ( (LTLAP1==true) ) ) && ( (LTLAP2==true) ))) || ( <>(( ( <>((LTLAP3==true)) ) && ( (LTLAP4==true) ) ) && ( (LTLAP5==true) ))) , --buchi-type=spotba], workingDir=/home/mcc/execution]
127
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:170)
at fr.lip6.move.gal.application.LTSminRunner.access$10(LTSminRunner.java:124)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:93)
at java.base/java.lang.Thread.run(Thread.java:834)
Detected timeout of ITS tools.
[2020-05-14 22:28:25] [INFO ] Flatten gal took : 7 ms
[2020-05-14 22:28:25] [INFO ] Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 1 ms
[2020-05-14 22:28:25] [INFO ] Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock, --gen-order, FOLLOW], workingDir=/home/mcc/execution]
its-ltl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock --gen-order FOLLOW
Read 13 LTL properties
Checking formula 0 : !(((G(((G("((KdStarGStarPgStar>=1)&&(Pip2>=1))"))&&("(KdStarGStarPgStar>=1)"))&&("(Pip2>=1)")))||(F(((F("((GStarP3>=1)&&(P3k>=1))"))&&("(GP3>=1)"))&&("(KdStar>=1)")))))
Formula 0 simplified : !(G("(KdStarGStarPgStar>=1)" & "(Pip2>=1)" & G"((KdStarGStarPgStar>=1)&&(Pip2>=1))") | F("(GP3>=1)" & "(KdStar>=1)" & F"((GStarP3>=1)&&(P3k>=1))"))
Reverse transition relation is NOT exact ! Due to transitions k2, k55, k60, k7, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :0/60/4/64
Computing Next relation with stutter on 256 deadlock states
Detected timeout of ITS tools.
[2020-05-14 22:48:25] [INFO ] Flatten gal took : 10 ms
[2020-05-14 22:48:25] [INFO ] Input system was already deterministic with 64 transitions.
[2020-05-14 22:48:25] [INFO ] Transformed 39 places.
[2020-05-14 22:48:25] [INFO ] Transformed 64 transitions.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2020-05-14 22:48:25] [INFO ] Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 1 ms
[2020-05-14 22:48:25] [INFO ] Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 1 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock, --load-order, /home/mcc/execution/model.ord, --gen-order, FOLLOW], workingDir=/home/mcc/execution]
its-ltl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock --load-order /home/mcc/execution/model.ord --gen-order FOLLOW
Read 13 LTL properties
Successfully loaded order from file /home/mcc/execution/model.ord
Checking formula 0 : !(((G(((G("((KdStarGStarPgStar>=1)&&(Pip2>=1))"))&&("(KdStarGStarPgStar>=1)"))&&("(Pip2>=1)")))||(F(((F("((GStarP3>=1)&&(P3k>=1))"))&&("(GP3>=1)"))&&("(KdStar>=1)")))))
Formula 0 simplified : !(G("(KdStarGStarPgStar>=1)" & "(Pip2>=1)" & G"((KdStarGStarPgStar>=1)&&(Pip2>=1))") | F("(GP3>=1)" & "(KdStar>=1)" & F"((GStarP3>=1)&&(P3k>=1))"))
Reverse transition relation is NOT exact ! Due to transitions t12, t51, t57, t61, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :0/60/4/64
Computing Next relation with stutter on 256 deadlock states
BK_TIME_CONFINEMENT_REACHED
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-15"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is Angiogenesis-PT-15, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r006-smll-158897515900342"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-15.tgz
mv Angiogenesis-PT-15 execution
cd execution
if [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "UpperBounds" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] || [ "LTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME LTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;