About the Execution of ITS-Tools for Angiogenesis-PT-05
| Execution Summary | |||||
| Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
| 15741.530 | 199284.00 | 228688.00 | 902.30 | TFFFFFFFFFFFFFFF | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/data/fkordon/mcc2020-input.r006-smll-158897515900326.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2020-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is Angiogenesis-PT-05, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r006-smll-158897515900326
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 216K
-rw-r--r-- 1 mcc users 3.5K Apr 28 14:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 18K Apr 28 14:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.5K Apr 28 14:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K Apr 28 14:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 28 14:22 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K Apr 28 14:22 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.2K Apr 28 14:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K Apr 28 14:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K Apr 28 14:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 28 14:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.1K Apr 28 14:22 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 13K Apr 28 14:22 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.8K Apr 28 14:22 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 19K Apr 28 14:22 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Apr 28 14:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Apr 28 14:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 equiv_col
-rw-r--r-- 1 mcc users 3 Apr 28 14:22 instance
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 iscolored
-rw-r--r-- 1 mcc users 33K Apr 28 14:22 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-05-00
FORMULA_NAME Angiogenesis-PT-05-01
FORMULA_NAME Angiogenesis-PT-05-02
FORMULA_NAME Angiogenesis-PT-05-03
FORMULA_NAME Angiogenesis-PT-05-04
FORMULA_NAME Angiogenesis-PT-05-05
FORMULA_NAME Angiogenesis-PT-05-06
FORMULA_NAME Angiogenesis-PT-05-07
FORMULA_NAME Angiogenesis-PT-05-08
FORMULA_NAME Angiogenesis-PT-05-09
FORMULA_NAME Angiogenesis-PT-05-10
FORMULA_NAME Angiogenesis-PT-05-11
FORMULA_NAME Angiogenesis-PT-05-12
FORMULA_NAME Angiogenesis-PT-05-13
FORMULA_NAME Angiogenesis-PT-05-14
FORMULA_NAME Angiogenesis-PT-05-15
=== Now, execution of the tool begins
BK_START 1589481136374
[2020-05-14 18:32:18] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-14 18:32:18] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-14 18:32:18] [INFO ] Load time of PNML (sax parser for PT used): 54 ms
[2020-05-14 18:32:18] [INFO ] Transformed 39 places.
[2020-05-14 18:32:18] [INFO ] Transformed 64 transitions.
[2020-05-14 18:32:18] [INFO ] Parsed PT model containing 39 places and 64 transitions in 109 ms.
Parsed 16 properties from file /home/mcc/execution/LTLFireability.xml in 21 ms.
Working with output stream class java.io.PrintStream
Incomplete random walk after 100003 steps, including 0 resets, run finished after 169 ms. (steps per millisecond=591 ) properties seen :[1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 0, 1, 1, 1, 1, 0, 1, 1, 1]
// Phase 1: matrix 64 rows 39 cols
[2020-05-14 18:32:19] [INFO ] Computed 8 place invariants in 6 ms
[2020-05-14 18:32:19] [INFO ] [Real]Absence check using 8 positive place invariants in 17 ms returned sat
[2020-05-14 18:32:19] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 18:32:19] [INFO ] [Real]Absence check using state equation in 50 ms returned sat
[2020-05-14 18:32:19] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 20 ms.
[2020-05-14 18:32:19] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 18:32:19] [INFO ] [Nat]Absence check using 8 positive place invariants in 12 ms returned sat
[2020-05-14 18:32:19] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 18:32:19] [INFO ] [Nat]Absence check using state equation in 37 ms returned sat
[2020-05-14 18:32:19] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 11 ms.
[2020-05-14 18:32:19] [INFO ] Added : 59 causal constraints over 13 iterations in 159 ms. Result :sat
[2020-05-14 18:32:19] [INFO ] [Real]Absence check using 8 positive place invariants in 5 ms returned sat
[2020-05-14 18:32:19] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 18:32:19] [INFO ] [Real]Absence check using state equation in 31 ms returned sat
[2020-05-14 18:32:19] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 14 ms.
[2020-05-14 18:32:19] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 18:32:19] [INFO ] [Nat]Absence check using 8 positive place invariants in 6 ms returned sat
[2020-05-14 18:32:19] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 18:32:19] [INFO ] [Nat]Absence check using state equation in 29 ms returned sat
[2020-05-14 18:32:19] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 12 ms.
[2020-05-14 18:32:19] [INFO ] Added : 50 causal constraints over 11 iterations in 129 ms. Result :sat
[2020-05-14 18:32:19] [INFO ] [Real]Absence check using 8 positive place invariants in 5 ms returned sat
[2020-05-14 18:32:19] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 18:32:19] [INFO ] [Real]Absence check using state equation in 29 ms returned sat
[2020-05-14 18:32:19] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 10 ms.
[2020-05-14 18:32:19] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 18:32:19] [INFO ] [Nat]Absence check using 8 positive place invariants in 7 ms returned sat
[2020-05-14 18:32:19] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 18:32:20] [INFO ] [Nat]Absence check using state equation in 28 ms returned sat
[2020-05-14 18:32:20] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 7 ms.
[2020-05-14 18:32:20] [INFO ] Added : 50 causal constraints over 10 iterations in 90 ms. Result :sat
[2020-05-14 18:32:20] [INFO ] [Real]Absence check using 8 positive place invariants in 5 ms returned sat
[2020-05-14 18:32:20] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 18:32:20] [INFO ] [Real]Absence check using state equation in 31 ms returned sat
[2020-05-14 18:32:20] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 6 ms.
[2020-05-14 18:32:20] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 18:32:20] [INFO ] [Nat]Absence check using 8 positive place invariants in 7 ms returned sat
[2020-05-14 18:32:20] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 18:32:20] [INFO ] [Nat]Absence check using state equation in 28 ms returned sat
[2020-05-14 18:32:20] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 7 ms.
[2020-05-14 18:32:20] [INFO ] Added : 51 causal constraints over 11 iterations in 94 ms. Result :sat
[2020-05-14 18:32:20] [INFO ] Initial state reduction rules for CTL removed 5 formulas.
[2020-05-14 18:32:20] [INFO ] Flatten gal took : 48 ms
FORMULA Angiogenesis-PT-05-12 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-05-11 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-05-10 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-05-08 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-05-00 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2020-05-14 18:32:20] [INFO ] Flatten gal took : 15 ms
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
[2020-05-14 18:32:20] [INFO ] Applying decomposition
[2020-05-14 18:32:20] [INFO ] Flatten gal took : 19 ms
[2020-05-14 18:32:20] [INFO ] Input system was already deterministic with 64 transitions.
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph4429391716188015640.txt, -o, /tmp/graph4429391716188015640.bin, -w, /tmp/graph4429391716188015640.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph4429391716188015640.bin, -l, -1, -v, -w, /tmp/graph4429391716188015640.weights, -q, 0, -e, 0.001], workingDir=null]
[2020-05-14 18:32:20] [INFO ] Decomposing Gal with order
[2020-05-14 18:32:20] [INFO ] Rewriting arrays to variables to allow decomposition.
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 64 rows 39 cols
[2020-05-14 18:32:20] [INFO ] Computed 8 place invariants in 12 ms
inv : KdStar + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 = 5
inv : Gab1 + GP3 + GStarP3 + GStarP3kP3 + GStarPgP3 + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 = 5
inv : DAGE + Enz = 5
inv : GStarPgP3 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 + Pg = 5
inv : Pten + PtP2 + PtP3 + PtP3P2 = 5
inv : AktP3 + DAG + DAGE + GP3 + GStarP3 + GStarP3kP3 + GStarPgP3 + KdStarGP3 + KdStarGStarP3 + KdStarGStarP3kP3 + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + 2*KdStarGStarP3kStarP3P2 + KdStarGStarPgP3 + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + 2*KdStarGStarPgStarP3P2 + KdStarPgStarP2 + Pip2 + Pip3 + PtP2 + PtP3 + 2*PtP3P2 = 5
inv : Akt + AktP3 + AktStar = 5
inv : GStarP3kP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + P3k = 5
Total of 8 invariants.
[2020-05-14 18:32:20] [INFO ] Computed 8 place invariants in 13 ms
[2020-05-14 18:32:20] [INFO ] Removed a total of 39 redundant transitions.
[2020-05-14 18:32:20] [INFO ] Flatten gal took : 69 ms
[2020-05-14 18:32:20] [INFO ] Proved 39 variables to be positive in 109 ms
[2020-05-14 18:32:20] [INFO ] Fuse similar labels procedure discarded/fused a total of 2 labels/synchronizations in 6 ms.
[2020-05-14 18:32:20] [INFO ] Computing symmetric may disable matrix : 64 transitions.
[2020-05-14 18:32:20] [INFO ] Computation of disable matrix completed :0/64 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-14 18:32:20] [INFO ] Computation of Complete disable matrix. took 2 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-14 18:32:20] [INFO ] Computing symmetric may enable matrix : 64 transitions.
[2020-05-14 18:32:20] [INFO ] Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 4 ms
[2020-05-14 18:32:20] [INFO ] Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 2 ms
[2020-05-14 18:32:20] [INFO ] Computation of Complete enable matrix. took 2 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]
its-ltl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 11 LTL properties
Checking formula 0 : !((X((!((!((X("((i2.u5.GStarP3>=1)&&(i2.u5.P3k>=1))"))U("((i0.u2.GP3>=1)&&(i0.u3.KdStar>=1))")))U("(u6.KdStarGStarP3k>=1)")))&&(!(X(X("(((u10.KdStarPgStarP2>=1)&&(i2.u5.GStarP3>=1))&&(i2.u5.P3k>=1))")))))))
Formula 0 simplified : !X(!(!(X"((i2.u5.GStarP3>=1)&&(i2.u5.P3k>=1))" U "((i0.u2.GP3>=1)&&(i0.u3.KdStar>=1))") U "(u6.KdStarGStarP3k>=1)") & !XX"(((u10.KdStarPgStarP2>=1)&&(i2.u5.GStarP3>=1))&&(i2.u5.P3k>=1))")
built 14 ordering constraints for composite.
built 13 ordering constraints for composite.
built 11 ordering constraints for composite.
built 13 ordering constraints for composite.
built 7 ordering constraints for composite.
built 7 ordering constraints for composite.
[2020-05-14 18:32:22] [INFO ] Computing symmetric co enabling matrix : 64 transitions.
Reverse transition relation is NOT exact ! Due to transitions i0.u2.k2, i0.u3.k7, i6.k55, i6.u12.k60, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :0/59/4/63
Computing Next relation with stutter on 36 deadlock states
[2020-05-14 18:32:24] [INFO ] Computation of co-enabling matrix(4/64) took 1452 ms. Total solver calls (SAT/UNSAT): 274(274/0)
7 unique states visited
5 strongly connected components in search stack
7 transitions explored
5 items max in DFS search stack
517 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,5.20715,104976,1,0,147791,16770,1089,278084,238,82276,267487
an accepting run exists (use option '-e' to print it)
Formula 0 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-01 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 1 : !((X((!(F("((i6.u0.Pip3>=1)&&(i6.u12.PtP2>=1))")))&&(F(G(X(X((X("((i6.u0.Pip3<1)||(i6.u11.Pten<1))"))U("(i6.u11.PtP3>=1)")))))))))
Formula 1 simplified : !X(!F"((i6.u0.Pip3>=1)&&(i6.u12.PtP2>=1))" & FGXX(X"((i6.u0.Pip3<1)||(i6.u11.Pten<1))" U "(i6.u11.PtP3>=1)"))
Computing Next relation with stutter on 36 deadlock states
[2020-05-14 18:32:27] [INFO ] Computation of co-enabling matrix(17/64) took 4679 ms. Total solver calls (SAT/UNSAT): 891(891/0)
[2020-05-14 18:32:30] [INFO ] Computation of co-enabling matrix(37/64) took 7711 ms. Total solver calls (SAT/UNSAT): 1511(1511/0)
[2020-05-14 18:32:32] [INFO ] Computation of Finished co-enabling matrix. took 9744 ms. Total solver calls (SAT/UNSAT): 1836(1836/0)
[2020-05-14 18:32:32] [INFO ] Computing Do-Not-Accords matrix : 64 transitions.
5 unique states visited
5 strongly connected components in search stack
5 transitions explored
5 items max in DFS search stack
786 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,13.0553,232344,1,0,317446,19417,1112,884750,238,110597,496934
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-02 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 2 : !((G(F("(i4.u1.DAGE>=1)"))))
Formula 2 simplified : !GF"(i4.u1.DAGE>=1)"
Computing Next relation with stutter on 36 deadlock states
3 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
26 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,13.3238,237888,1,0,327561,19445,1147,905518,238,110834,504217
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 3 : !((G(F(G((G("(i5.u4.KdStarGStarPgP3>=1)"))U("((i5.u9.KdStarGStarPgStarP3<1)||(i6.u12.Pip2<1))"))))))
Formula 3 simplified : !GFG(G"(i5.u4.KdStarGStarPgP3>=1)" U "((i5.u9.KdStarGStarPgStarP3<1)||(i6.u12.Pip2<1))")
Computing Next relation with stutter on 36 deadlock states
[2020-05-14 18:32:35] [INFO ] Computation of Completed DNA matrix. took 3100 ms. Total solver calls (SAT/UNSAT): 371(0/371)
[2020-05-14 18:32:35] [INFO ] Built C files in 14905ms conformant to PINS in folder :/home/mcc/execution
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
Compilation finished in 1736 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 46 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, [](<>([](([]((LTLAP8==true)))U((LTLAP9==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc: error while loading shared libraries: libltdl.so.7: cannot open shared object file: No such file or directory
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, [](<>([](([]((LTLAP8==true)))U((LTLAP9==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
127
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, [](<>([](([]((LTLAP8==true)))U((LTLAP9==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
127
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:170)
at fr.lip6.move.gal.application.LTSminRunner.access$10(LTSminRunner.java:124)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:93)
at java.base/java.lang.Thread.run(Thread.java:834)
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
6994 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,83.2552,1216596,1,0,1.462e+06,25779,1184,4.51288e+06,238,168685,2000720
an accepting run exists (use option '-e' to print it)
Formula 3 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 4 : !((F(G("(i6.u12.PtP3P2>=1)"))))
Formula 4 simplified : !FG"(i6.u12.PtP3P2>=1)"
Computing Next relation with stutter on 36 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
4704 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,130.301,1636092,1,0,2.04454e+06,48969,1205,6.63491e+06,239,259505,2314927
an accepting run exists (use option '-e' to print it)
Formula 4 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 5 : !((X(F(G("(i5.u9.KdStarGStarPgStarP3P2<1)")))))
Formula 5 simplified : !XFG"(i5.u9.KdStarGStarPgStarP3P2<1)"
Computing Next relation with stutter on 36 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
1549 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,145.793,1856692,1,0,2.35136e+06,50404,1243,7.24263e+06,239,264635,2734506
an accepting run exists (use option '-e' to print it)
Formula 5 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 6 : !((!(X(X(X(F(X(F((((G("((i2.u5.GStarP3>=1)&&(i0.u3.KdStar>=1))"))||("(i2.u5.GStarP3<1)"))||("(i0.u3.KdStar<1)"))U(X("(i4.u8.KdStarGStarPgStarP2>=1)")))))))))))
Formula 6 simplified : XXXFXF(("(i0.u3.KdStar<1)" | "(i2.u5.GStarP3<1)" | G"((i2.u5.GStarP3>=1)&&(i0.u3.KdStar>=1))") U X"(i4.u8.KdStarGStarPgStarP2>=1)")
Computing Next relation with stutter on 36 deadlock states
8 unique states visited
8 strongly connected components in search stack
8 transitions explored
8 items max in DFS search stack
178 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,147.565,1895420,1,0,2.41478e+06,50491,1254,7.3248e+06,239,264981,2818737
an accepting run exists (use option '-e' to print it)
Formula 6 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 7 : !(((("(i6.u0.AktP3>=1)")U(F(((!(G("((i0.u2.KdStarGStar>=1)&&(i2.u5.P3k>=1))")))||("(i5.u4.KdStarGStarPgP3<1)"))||((!(X("((i0.u2.KdStarGStar>=1)&&(i6.u0.Pip3>=1))")))&&("(i6.u0.AktP3<1)")))))U("(i5.u4.KdStarGStarPgP3>=1)")))
Formula 7 simplified : !(("(i6.u0.AktP3>=1)" U F("(i5.u4.KdStarGStarPgP3<1)" | !G"((i0.u2.KdStarGStar>=1)&&(i2.u5.P3k>=1))" | ("(i6.u0.AktP3<1)" & !X"((i0.u2.KdStarGStar>=1)&&(i6.u0.Pip3>=1))"))) U "(i5.u4.KdStarGStarPgP3>=1)")
Computing Next relation with stutter on 36 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
48 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,148.054,1905948,1,0,2.43227e+06,50500,1298,7.34234e+06,241,265008,2846208
an accepting run exists (use option '-e' to print it)
Formula 7 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 8 : !((X(X(G((F("(((i6.u11.PtP3>=1)&&(i0.u3.KdStarGStarP3>=1))&&(i2.u5.P3k>=1))"))U("(i6.u11.PtP3>=1)"))))))
Formula 8 simplified : !XXG(F"(((i6.u11.PtP3>=1)&&(i0.u3.KdStarGStarP3>=1))&&(i2.u5.P3k>=1))" U "(i6.u11.PtP3>=1)")
Computing Next relation with stutter on 36 deadlock states
5 unique states visited
5 strongly connected components in search stack
6 transitions explored
5 items max in DFS search stack
49 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,148.54,1914128,1,0,2.44596e+06,50795,1337,7.36877e+06,241,265838,2864077
an accepting run exists (use option '-e' to print it)
Formula 8 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-13 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 9 : !(((X(X(("(i4.u8.KdStarGStarPg<1)")U(F("(((i6.u12.Pip2>=1)&&(i6.u11.Pten>=1))&&(u6.KdStarGStarP3k>=1))")))))||(G("(i4.u8.KdStarGStarPg>=1)"))))
Formula 9 simplified : !(XX("(i4.u8.KdStarGStarPg<1)" U F"(((i6.u12.Pip2>=1)&&(i6.u11.Pten>=1))&&(u6.KdStarGStarP3k>=1))") | G"(i4.u8.KdStarGStarPg>=1)")
Computing Next relation with stutter on 36 deadlock states
4 unique states visited
4 strongly connected components in search stack
4 transitions explored
4 items max in DFS search stack
892 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,157.465,2066456,1,0,2.6093e+06,57868,1368,8.4386e+06,241,313325,2957888
an accepting run exists (use option '-e' to print it)
Formula 9 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-14 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 10 : !((X(("((i6.u12.PtP3P2>=1)||(i0.u3.KdStarGStarP3>=1))")U(F("((i2.u7.KdStarGStarP3kStarP3>=1)&&(i6.u12.Pip2>=1))")))))
Formula 10 simplified : !X("((i6.u12.PtP3P2>=1)||(i0.u3.KdStarGStarP3>=1))" U F"((i2.u7.KdStarGStarP3kStarP3>=1)&&(i6.u12.Pip2>=1))")
Computing Next relation with stutter on 36 deadlock states
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
3572 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,193.185,2326692,1,0,2.94268e+06,58233,597,9.47526e+06,124,318275,59322
an accepting run exists (use option '-e' to print it)
Formula 10 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
BK_STOP 1589481335658
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-05"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is Angiogenesis-PT-05, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r006-smll-158897515900326"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-05.tgz
mv Angiogenesis-PT-05 execution
cd execution
if [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "UpperBounds" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] || [ "LTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "LTLFireability" = "ReachabilityDeadlock" ] || [ "LTLFireability" = "QuasiLiveness" ] || [ "LTLFireability" = "StableMarking" ] || [ "LTLFireability" = "Liveness" ] || [ "LTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME LTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;