About the Execution of ITS-Tools for Angiogenesis-PT-05
Execution Summary | |||||
Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
15740.320 | 1578936.00 | 1613574.00 | 3713.80 | FTFFTFFFFFFFFFTF | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/data/fkordon/mcc2020-input.r006-smll-158897515900325.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2020-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool itstools
Input is Angiogenesis-PT-05, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r006-smll-158897515900325
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 216K
-rw-r--r-- 1 mcc users 3.5K Apr 28 14:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 18K Apr 28 14:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.5K Apr 28 14:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K Apr 28 14:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Apr 28 14:22 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K Apr 28 14:22 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.2K Apr 28 14:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K Apr 28 14:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K Apr 28 14:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 28 14:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.1K Apr 28 14:22 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 13K Apr 28 14:22 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.8K Apr 28 14:22 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 19K Apr 28 14:22 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Apr 28 14:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Apr 28 14:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 equiv_col
-rw-r--r-- 1 mcc users 3 Apr 28 14:22 instance
-rw-r--r-- 1 mcc users 6 Apr 28 14:22 iscolored
-rw-r--r-- 1 mcc users 33K Apr 28 14:22 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-05-00
FORMULA_NAME Angiogenesis-PT-05-01
FORMULA_NAME Angiogenesis-PT-05-02
FORMULA_NAME Angiogenesis-PT-05-03
FORMULA_NAME Angiogenesis-PT-05-04
FORMULA_NAME Angiogenesis-PT-05-05
FORMULA_NAME Angiogenesis-PT-05-06
FORMULA_NAME Angiogenesis-PT-05-07
FORMULA_NAME Angiogenesis-PT-05-08
FORMULA_NAME Angiogenesis-PT-05-09
FORMULA_NAME Angiogenesis-PT-05-10
FORMULA_NAME Angiogenesis-PT-05-11
FORMULA_NAME Angiogenesis-PT-05-12
FORMULA_NAME Angiogenesis-PT-05-13
FORMULA_NAME Angiogenesis-PT-05-14
FORMULA_NAME Angiogenesis-PT-05-15
=== Now, execution of the tool begins
BK_START 1589480905834
[2020-05-14 18:28:28] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2020-05-14 18:28:28] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2020-05-14 18:28:28] [INFO ] Load time of PNML (sax parser for PT used): 68 ms
[2020-05-14 18:28:28] [INFO ] Transformed 39 places.
[2020-05-14 18:28:28] [INFO ] Transformed 64 transitions.
[2020-05-14 18:28:28] [INFO ] Parsed PT model containing 39 places and 64 transitions in 143 ms.
Parsed 16 properties from file /home/mcc/execution/LTLCardinality.xml in 22 ms.
Working with output stream class java.io.PrintStream
Incomplete random walk after 100004 steps, including 3 resets, run finished after 190 ms. (steps per millisecond=526 ) properties seen :[1, 1, 1, 1, 1, 1, 1, 1, 0, 0, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1]
// Phase 1: matrix 64 rows 39 cols
[2020-05-14 18:28:29] [INFO ] Computed 8 place invariants in 6 ms
[2020-05-14 18:28:29] [INFO ] [Real]Absence check using 8 positive place invariants in 22 ms returned sat
[2020-05-14 18:28:29] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 18:28:29] [INFO ] [Real]Absence check using state equation in 70 ms returned sat
[2020-05-14 18:28:29] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 18:28:29] [INFO ] [Nat]Absence check using 8 positive place invariants in 12 ms returned sat
[2020-05-14 18:28:29] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 18:28:29] [INFO ] [Nat]Absence check using state equation in 33 ms returned sat
[2020-05-14 18:28:29] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 11 ms.
[2020-05-14 18:28:29] [INFO ] Added : 52 causal constraints over 11 iterations in 154 ms. Result :sat
[2020-05-14 18:28:29] [INFO ] [Real]Absence check using 8 positive place invariants in 5 ms returned sat
[2020-05-14 18:28:29] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 18:28:29] [INFO ] [Real]Absence check using state equation in 30 ms returned sat
[2020-05-14 18:28:29] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 8 ms.
[2020-05-14 18:28:29] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 18:28:29] [INFO ] [Nat]Absence check using 8 positive place invariants in 10 ms returned sat
[2020-05-14 18:28:29] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 18:28:29] [INFO ] [Nat]Absence check using state equation in 55 ms returned sat
[2020-05-14 18:28:29] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 9 ms.
[2020-05-14 18:28:30] [INFO ] Added : 56 causal constraints over 12 iterations in 122 ms. Result :sat
[2020-05-14 18:28:30] [INFO ] [Real]Absence check using 8 positive place invariants in 5 ms returned sat
[2020-05-14 18:28:30] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 18:28:30] [INFO ] [Real]Absence check using state equation in 29 ms returned sat
[2020-05-14 18:28:30] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 18:28:30] [INFO ] [Nat]Absence check using 8 positive place invariants in 9 ms returned sat
[2020-05-14 18:28:30] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 18:28:30] [INFO ] [Nat]Absence check using state equation in 53 ms returned sat
[2020-05-14 18:28:30] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 9 ms.
[2020-05-14 18:28:30] [INFO ] Added : 57 causal constraints over 12 iterations in 114 ms. Result :sat
[2020-05-14 18:28:30] [INFO ] [Real]Absence check using 8 positive place invariants in 5 ms returned sat
[2020-05-14 18:28:30] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2020-05-14 18:28:30] [INFO ] [Real]Absence check using state equation in 29 ms returned sat
[2020-05-14 18:28:30] [INFO ] Solution in real domain found non-integer solution.
[2020-05-14 18:28:30] [INFO ] [Nat]Absence check using 8 positive place invariants in 6 ms returned sat
[2020-05-14 18:28:30] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2020-05-14 18:28:30] [INFO ] [Nat]Absence check using state equation in 30 ms returned sat
[2020-05-14 18:28:30] [INFO ] Computed and/alt/rep : 61/165/61 causal constraints in 9 ms.
[2020-05-14 18:28:30] [INFO ] Added : 59 causal constraints over 12 iterations in 104 ms. Result :sat
[2020-05-14 18:28:30] [INFO ] Initial state reduction rules for CTL removed 2 formulas.
[2020-05-14 18:28:30] [INFO ] Flatten gal took : 47 ms
FORMULA Angiogenesis-PT-05-14 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-05-01 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2020-05-14 18:28:30] [INFO ] Flatten gal took : 16 ms
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
[2020-05-14 18:28:30] [INFO ] Applying decomposition
[2020-05-14 18:28:30] [INFO ] Flatten gal took : 19 ms
[2020-05-14 18:28:30] [INFO ] Input system was already deterministic with 64 transitions.
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/convert-linux64, -i, /tmp/graph3816331624391526260.txt, -o, /tmp/graph3816331624391526260.bin, -w, /tmp/graph3816331624391526260.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202005100927/bin/louvain-linux64, /tmp/graph3816331624391526260.bin, -l, -1, -v, -w, /tmp/graph3816331624391526260.weights, -q, 0, -e, 0.001], workingDir=null]
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 64 rows 39 cols
[2020-05-14 18:28:31] [INFO ] Computed 8 place invariants in 4 ms
inv : KdStar + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 = 5
inv : Gab1 + GP3 + GStarP3 + GStarP3kP3 + GStarPgP3 + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 = 5
inv : DAGE + Enz = 5
inv : GStarPgP3 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 + Pg = 5
inv : Pten + PtP2 + PtP3 + PtP3P2 = 5
inv : AktP3 + DAG + DAGE + GP3 + GStarP3 + GStarP3kP3 + GStarPgP3 + KdStarGP3 + KdStarGStarP3 + KdStarGStarP3kP3 + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + 2*KdStarGStarP3kStarP3P2 + KdStarGStarPgP3 + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + 2*KdStarGStarPgStarP3P2 + KdStarPgStarP2 + Pip2 + Pip3 + PtP2 + PtP3 + 2*PtP3P2 = 5
inv : Akt + AktP3 + AktStar = 5
inv : GStarP3kP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + P3k = 5
Total of 8 invariants.
[2020-05-14 18:28:31] [INFO ] Computed 8 place invariants in 7 ms
[2020-05-14 18:28:31] [INFO ] Decomposing Gal with order
[2020-05-14 18:28:31] [INFO ] Rewriting arrays to variables to allow decomposition.
[2020-05-14 18:28:31] [INFO ] Removed a total of 75 redundant transitions.
[2020-05-14 18:28:31] [INFO ] Flatten gal took : 67 ms
[2020-05-14 18:28:31] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 3 ms.
[2020-05-14 18:28:31] [INFO ] Proved 39 variables to be positive in 161 ms
[2020-05-14 18:28:31] [INFO ] Computing symmetric may disable matrix : 64 transitions.
[2020-05-14 18:28:31] [INFO ] Computation of disable matrix completed :0/64 took 1 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-14 18:28:31] [INFO ] Computation of Complete disable matrix. took 4 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-14 18:28:31] [INFO ] Computing symmetric may enable matrix : 64 transitions.
[2020-05-14 18:28:31] [INFO ] Computation of Complete enable matrix. took 2 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2020-05-14 18:28:31] [INFO ] Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 13 ms
[2020-05-14 18:28:31] [INFO ] Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 2 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock, --gen-order, FOLLOW], workingDir=/home/mcc/execution]
its-ltl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock --gen-order FOLLOW
Read 14 LTL properties
Checking formula 0 : !((!(X((G(X(F("(gi4.gu10.KdStarGStarP3k<=gi4.gu10.KdStarPg)"))))||((("(gi4.gu10.KdStarGStarP3k<=gi4.gu10.KdStarPg)")U("(gi2.gu2.Akt>gi2.gu2.DAG)"))&&("(gi4.gu10.KdStarPg>=3)"))))))
Formula 0 simplified : X(GXF"(gi4.gu10.KdStarGStarP3k<=gi4.gu10.KdStarPg)" | ("(gi4.gu10.KdStarPg>=3)" & ("(gi4.gu10.KdStarGStarP3k<=gi4.gu10.KdStarPg)" U "(gi2.gu2.Akt>gi2.gu2.DAG)")))
[2020-05-14 18:28:33] [INFO ] Computing symmetric co enabling matrix : 64 transitions.
[2020-05-14 18:28:34] [INFO ] Computation of co-enabling matrix(5/64) took 1152 ms. Total solver calls (SAT/UNSAT): 329(329/0)
[2020-05-14 18:28:37] [INFO ] Computation of co-enabling matrix(21/64) took 4183 ms. Total solver calls (SAT/UNSAT): 1059(1059/0)
[2020-05-14 18:28:40] [INFO ] Computation of co-enabling matrix(48/64) took 7233 ms. Total solver calls (SAT/UNSAT): 1731(1731/0)
[2020-05-14 18:28:40] [INFO ] Computation of Finished co-enabling matrix. took 7802 ms. Total solver calls (SAT/UNSAT): 1836(1836/0)
[2020-05-14 18:28:40] [INFO ] Computing Do-Not-Accords matrix : 64 transitions.
[2020-05-14 18:28:44] [INFO ] Computation of Completed DNA matrix. took 3274 ms. Total solver calls (SAT/UNSAT): 371(0/371)
[2020-05-14 18:28:44] [INFO ] Built C files in 13328ms conformant to PINS in folder :/home/mcc/execution
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
Compilation finished in 1460 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 43 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, !( X(( [](X(<>((LTLAP0==true))))) || ( ( ((LTLAP0==true))U((LTLAP1==true)) ) && ( (LTLAP2==true) )) )) , --buchi-type=spotba], workingDir=/home/mcc/execution]
/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc: error while loading shared libraries: libltdl.so.7: cannot open shared object file: No such file or directory
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, !( X(( [](X(<>((LTLAP0==true))))) || ( ( ((LTLAP0==true))U((LTLAP1==true)) ) && ( (LTLAP2==true) )) )) , --buchi-type=spotba], workingDir=/home/mcc/execution]
127
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, !( X(( [](X(<>((LTLAP0==true))))) || ( ( ((LTLAP0==true))U((LTLAP1==true)) ) && ( (LTLAP2==true) )) )) , --buchi-type=spotba], workingDir=/home/mcc/execution]
127
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:170)
at fr.lip6.move.gal.application.LTSminRunner.access$10(LTSminRunner.java:124)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:93)
at java.base/java.lang.Thread.run(Thread.java:834)
Reverse transition relation is NOT exact ! Due to transitions k2, k55, k60, k7, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :0/60/4/64
Computing Next relation with stutter on 36 deadlock states
4 unique states visited
4 strongly connected components in search stack
4 transitions explored
4 items max in DFS search stack
78130 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,781.334,4095800,1,0,178,1.86044e+07,26,120,799,2.89158e+07,213
an accepting run exists (use option '-e' to print it)
Formula 0 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 1 : !((X(F(!(G(F(!(X((F(X("(gi2.gu12.KdStarGStarPg>=1)")))||(G("((gi2.gu2.GStarP3kP3<=gi3.gu7.PtP2)||(gi3.gu4.KdStarGStar<=gi3.gu4.AktP3))")))))))))))
Formula 1 simplified : !XF!GF!X(FX"(gi2.gu12.KdStarGStarPg>=1)" | G"((gi2.gu2.GStarP3kP3<=gi3.gu7.PtP2)||(gi3.gu4.KdStarGStar<=gi3.gu4.AktP3))")
Computing Next relation with stutter on 36 deadlock states
5 unique states visited
5 strongly connected components in search stack
6 transitions explored
5 items max in DFS search stack
22073 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1002.06,4561980,1,0,178,2.06341e+07,23,120,803,2.89158e+07,97
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-02 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 2 : !((G((G(!(X(X(F("(gu8.KdStarGStarP3kStarP3P2<=gu8.KdStarGStarP3kStar)"))))))U(X("((gi7.gu9.KdStar<=gi2.gu2.GStarP3kP3)||((gi4.gu5.KdStarGStarPgP3>=0)&&(gi4.gu5.KdStarGStarPgP3<2)))")))))
Formula 2 simplified : !G(G!XXF"(gu8.KdStarGStarP3kStarP3P2<=gu8.KdStarGStarP3kStar)" U X"((gi7.gu9.KdStar<=gi2.gu2.GStarP3kP3)||((gi4.gu5.KdStarGStarPgP3>=0)&&(gi4.gu5.KdStarGStarPgP3<2)))")
Computing Next relation with stutter on 36 deadlock states
3 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
7484 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1076.91,4562140,1,0,178,2.06341e+07,39,120,1015,2.89158e+07,271
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 3 : !((X((G((("(gi3.gu7.KdStarGStarP3kP3<=gi3.gu7.KdStarGStarP3kStarP3)")U("(gi4.gu5.KdStarGStarP3>=3)"))&&("(gu6.KdStarGStarPgStar<=gu6.KdStarGStarP3kStarP2)")))||(F("(gi3.gu7.KdStarGStarP3kP3<=gi3.gu7.KdStarGStarP3kStarP3)")))))
Formula 3 simplified : !X(G("(gu6.KdStarGStarPgStar<=gu6.KdStarGStarP3kStarP2)" & ("(gi3.gu7.KdStarGStarP3kP3<=gi3.gu7.KdStarGStarP3kStarP3)" U "(gi4.gu5.KdStarGStarP3>=3)")) | F"(gi3.gu7.KdStarGStarP3kP3<=gi3.gu7.KdStarGStarP3kStarP3)")
Computing Next relation with stutter on 36 deadlock states
2 unique states visited
0 strongly connected components in search stack
1 transitions explored
2 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1076.91,4562140,1,0,178,2.06341e+07,58,120,1032,2.89158e+07,279
no accepting run found
Formula 3 is TRUE no accepting run found.
FORMULA Angiogenesis-PT-05-04 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 4 : !(((F((("(gi7.gu13.PtP3>=3)")U(("(gi7.gu9.KdStarGStarPgStarP3>=2)")U("(gi7.gu13.PtP3<3)")))||("((gi4.gu5.KdStarGStarP3<=gi4.gu10.KdStarGStarP3k)&&(gi1.gu1.GP3<=gi1.gu1.PtP3P2))")))&&(G("(gi1.gu1.GP3<=gi1.gu1.PtP3P2)"))))
Formula 4 simplified : !(F("((gi4.gu5.KdStarGStarP3<=gi4.gu10.KdStarGStarP3k)&&(gi1.gu1.GP3<=gi1.gu1.PtP3P2))" | ("(gi7.gu13.PtP3>=3)" U ("(gi7.gu9.KdStarGStarPgStarP3>=2)" U "(gi7.gu13.PtP3<3)"))) & G"(gi1.gu1.GP3<=gi1.gu1.PtP3P2)")
Computing Next relation with stutter on 36 deadlock states
Detected timeout of ITS tools.
[2020-05-14 18:48:31] [INFO ] Flatten gal took : 6 ms
[2020-05-14 18:48:31] [INFO ] Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 1 ms
[2020-05-14 18:48:31] [INFO ] Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 0 ms
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock, --gen-order, FOLLOW], workingDir=/home/mcc/execution]
its-ltl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202005100927/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock --gen-order FOLLOW
Read 10 LTL properties
Checking formula 0 : !(((F((("(PtP3>=3)")U(("(KdStarGStarPgStarP3>=2)")U("(PtP3<3)")))||("((KdStarGStarP3<=KdStarGStarP3k)&&(GP3<=PtP3P2))")))&&(G("(GP3<=PtP3P2)"))))
Formula 0 simplified : !(F("((KdStarGStarP3<=KdStarGStarP3k)&&(GP3<=PtP3P2))" | ("(PtP3>=3)" U ("(KdStarGStarPgStarP3>=2)" U "(PtP3<3)"))) & G"(GP3<=PtP3P2)")
Reverse transition relation is NOT exact ! Due to transitions k2, k55, k60, k7, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :0/60/4/64
Computing Next relation with stutter on 36 deadlock states
4 unique states visited
4 strongly connected components in search stack
5 transitions explored
4 items max in DFS search stack
4939 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,49.3951,989016,1,0,205,4.90006e+06,174,199,1665,6.4229e+06,471
an accepting run exists (use option '-e' to print it)
Formula 0 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 1 : !((G(X(F(G(("(Enz>=2)")||((F("(((GStarPgP3<=Pip2)&&(GStarP3kP3>=1))&&(GStarPgP3<=DAGE))"))&&(F("(GStarPgP3<=DAGE)")))))))))
Formula 1 simplified : !GXFG("(Enz>=2)" | (F"(((GStarPgP3<=Pip2)&&(GStarP3kP3>=1))&&(GStarPgP3<=DAGE))" & F"(GStarPgP3<=DAGE)"))
Computing Next relation with stutter on 36 deadlock states
3 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
3136 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,80.7611,1496668,1,0,309,7.23724e+06,198,313,1700,1.00012e+07,735
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 2 : !((G("(KdStarGStarPgP3<=KdStarGStarP3)")))
Formula 2 simplified : !G"(KdStarGStarPgP3<=KdStarGStarP3)"
Computing Next relation with stutter on 36 deadlock states
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
3741 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,118.169,2137192,1,0,427,1.04929e+07,204,448,1708,1.44178e+07,1041
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 3 : !((X(((F("(KdStarGStarPgStar>=3)"))||(X(X(("(Pg<=KdStarGStarPg)")U("(KdStarGStarPgStar>=3)")))))U(F(X("(Pg<=DAG)"))))))
Formula 3 simplified : !X((F"(KdStarGStarPgStar>=3)" | XX("(Pg<=KdStarGStarPg)" U "(KdStarGStarPgStar>=3)")) U FX"(Pg<=DAG)")
Computing Next relation with stutter on 36 deadlock states
4 unique states visited
4 strongly connected components in search stack
4 transitions explored
4 items max in DFS search stack
4018 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,158.346,2217828,1,0,478,1.08569e+07,17,500,781,1.49221e+07,157
an accepting run exists (use option '-e' to print it)
Formula 3 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-08 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 4 : !((X(((G("(KdStarGStar>=2)"))&&(F(!(X("(Pip3<=KdStarPgStarP2)")))))&&(G((X(X("(Pip3<=KdStarPgStarP2)")))&&("(Pten<=KdStarGStarPgStarP2)"))))))
Formula 4 simplified : !X(G"(KdStarGStar>=2)" & F!X"(Pip3<=KdStarPgStarP2)" & G("(Pten<=KdStarGStarPgStarP2)" & XX"(Pip3<=KdStarPgStarP2)"))
Computing Next relation with stutter on 36 deadlock states
4 unique states visited
4 strongly connected components in search stack
4 transitions explored
4 items max in DFS search stack
198 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,160.326,2218356,1,0,478,1.08569e+07,36,500,978,1.49221e+07,182
an accepting run exists (use option '-e' to print it)
Formula 4 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 5 : !((F((F("(KdStarGStarP3kStarP3P2>=1)"))||(X("(PtP2<=KdStarGStarPgStarP2)")))))
Formula 5 simplified : !F(F"(KdStarGStarP3kStarP3P2>=1)" | X"(PtP2<=KdStarGStarPgStarP2)")
Computing Next relation with stutter on 36 deadlock states
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
2518 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,185.51,2218460,1,0,478,1.08569e+07,50,500,989,1.49221e+07,476
an accepting run exists (use option '-e' to print it)
Formula 5 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-10 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 6 : !((X((G("(KdStarGStarP3kStarP3<=PtP2)"))&&(((!(X("((KdStarGStarP3kStarP3<=PtP2)||(GStarP3kP3<=DAG))")))U("(KdStarGStarP3kP3<3)"))||(F("(GStarP3kP3<=DAG)"))))))
Formula 6 simplified : !X(G"(KdStarGStarP3kStarP3<=PtP2)" & ((!X"((KdStarGStarP3kStarP3<=PtP2)||(GStarP3kP3<=DAG))" U "(KdStarGStarP3kP3<3)") | F"(GStarP3kP3<=DAG)"))
Computing Next relation with stutter on 36 deadlock states
5 unique states visited
5 strongly connected components in search stack
6 transitions explored
5 items max in DFS search stack
2567 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,211.172,2218572,1,0,478,1.08569e+07,71,500,1016,1.49221e+07,804
an accepting run exists (use option '-e' to print it)
Formula 6 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-11 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 7 : !((!(F(X(G(("(Pten>KdStarGP3)")U((!(X(X("(Pten<=KdStarGP3)"))))||("(KdStarGStarP3kP3>GStarP3kP3)"))))))))
Formula 7 simplified : FXG("(Pten>KdStarGP3)" U ("(KdStarGStarP3kP3>GStarP3kP3)" | !XX"(Pten<=KdStarGP3)"))
Computing Next relation with stutter on 36 deadlock states
5 unique states visited
4 strongly connected components in search stack
8 transitions explored
5 items max in DFS search stack
572 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,216.901,2218572,1,0,478,1.08569e+07,88,500,1047,1.49221e+07,914
an accepting run exists (use option '-e' to print it)
Formula 7 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 8 : !((!(G(X(F("(KdStarGStarPgStarP2<=KdStar)"))))))
Formula 8 simplified : GXF"(KdStarGStarPgStarP2<=KdStar)"
Computing Next relation with stutter on 36 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
8892 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,305.818,2450152,1,0,478,1.21698e+07,20,500,787,1.69821e+07,352
an accepting run exists (use option '-e' to print it)
Formula 8 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-13 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 9 : !((X(G(!(F(X(F("((KdStarGStarPgStarP3>KdStarGStarPgStarP2)&&(PtP2<=KdStarGStar))"))))))))
Formula 9 simplified : !XG!FXF"((KdStarGStarPgStarP3>KdStarGStarPgStarP2)&&(PtP2<=KdStarGStar))"
Computing Next relation with stutter on 36 deadlock states
5 unique states visited
5 strongly connected components in search stack
5 transitions explored
5 items max in DFS search stack
4071 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,346.535,2450152,1,0,478,1.21698e+07,34,500,997,1.75343e+07,685
an accepting run exists (use option '-e' to print it)
Formula 9 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
ITS tools runner thread asked to quit. Dying gracefully.
BK_STOP 1589482484770
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -timeout 3600 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss128m -Xms40m -Xmx16000m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-05"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool itstools"
echo " Input is Angiogenesis-PT-05, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r006-smll-158897515900325"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-05.tgz
mv Angiogenesis-PT-05 execution
cd execution
if [ "LTLCardinality" = "ReachabilityDeadlock" ] || [ "LTLCardinality" = "UpperBounds" ] || [ "LTLCardinality" = "QuasiLiveness" ] || [ "LTLCardinality" = "StableMarking" ] || [ "LTLCardinality" = "Liveness" ] || [ "LTLCardinality" = "OneSafe" ] || [ "LTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "LTLCardinality" = "ReachabilityDeadlock" ] || [ "LTLCardinality" = "QuasiLiveness" ] || [ "LTLCardinality" = "StableMarking" ] || [ "LTLCardinality" = "Liveness" ] || [ "LTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME LTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;