Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fko/mcc2019-input.r197-oct2-155272231700878.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fko/mcc2019-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..........................................
=====================================================================
Generated by BenchKit 2-3954
Executing tool itstoolsm
Input is Philosophers-PT-010000, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r197-oct2-155272231700878
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 155M
-rw-r--r-- 1 mcc users 4.8M Feb 12 09:12 CTLCardinality.txt
-rw-r--r-- 1 mcc users 16M Feb 12 09:12 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.0M Feb 8 08:50 CTLFireability.txt
-rw-r--r-- 1 mcc users 22M Feb 8 08:50 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.2K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 109 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 347 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.2M Feb 5 00:31 LTLCardinality.txt
-rw-r--r-- 1 mcc users 6.9M Feb 5 00:31 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.3M Feb 4 22:38 LTLFireability.txt
-rw-r--r-- 1 mcc users 4.9M Feb 4 22:38 LTLFireability.xml
-rw-r--r-- 1 mcc users 6.5M Feb 4 12:39 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 22M Feb 4 12:39 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 4.1M Feb 1 07:35 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17M Feb 1 07:35 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.1M Feb 4 22:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 2.6M Feb 4 22:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 7 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 42M Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Philosophers-PT-010000-CTLFireability-00
FORMULA_NAME Philosophers-PT-010000-CTLFireability-01
FORMULA_NAME Philosophers-PT-010000-CTLFireability-02
FORMULA_NAME Philosophers-PT-010000-CTLFireability-03
FORMULA_NAME Philosophers-PT-010000-CTLFireability-04
FORMULA_NAME Philosophers-PT-010000-CTLFireability-05
FORMULA_NAME Philosophers-PT-010000-CTLFireability-06
FORMULA_NAME Philosophers-PT-010000-CTLFireability-07
FORMULA_NAME Philosophers-PT-010000-CTLFireability-08
FORMULA_NAME Philosophers-PT-010000-CTLFireability-09
FORMULA_NAME Philosophers-PT-010000-CTLFireability-10
FORMULA_NAME Philosophers-PT-010000-CTLFireability-11
FORMULA_NAME Philosophers-PT-010000-CTLFireability-12
FORMULA_NAME Philosophers-PT-010000-CTLFireability-13
FORMULA_NAME Philosophers-PT-010000-CTLFireability-14
FORMULA_NAME Philosophers-PT-010000-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1554259666483

Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl, --load-order, /home/mcc/execution/model.ord], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl --load-order /home/mcc/execution/model.ord
Successfully loaded order from file /home/mcc/execution/model.ord
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Detected timeout of ITS tools.
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Detected timeout of ITS tools.
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201903251645/bin/convert-linux64, -i, /tmp/graph1711847919657961149.txt, -o, /tmp/graph1711847919657961149.bin, -w, /tmp/graph1711847919657961149.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201903251645/bin/louvain-linux64, /tmp/graph1711847919657961149.bin, -l, -1, -v, -w, /tmp/graph1711847919657961149.weights, -q, 0, -e, 0.001], workingDir=null]

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Apr 03, 2019 2:47:49 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt]
Apr 03, 2019 2:47:49 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Apr 03, 2019 2:47:51 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 1910 ms
Apr 03, 2019 2:47:51 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 50000 places.
Apr 03, 2019 2:47:52 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 50000 transitions.
Apr 03, 2019 2:56:12 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 37150 ms
Apr 03, 2019 2:56:17 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 50000 transitions.
Apr 03, 2019 2:56:18 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 50000 places.
Apr 03, 2019 2:56:18 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 50000 transitions.
Apr 03, 2019 2:56:31 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 237 ms
Apr 03, 2019 2:56:32 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 1180 ms
Apr 03, 2019 3:17:15 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 34525 ms
Apr 03, 2019 3:17:15 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 140 ms
Apr 03, 2019 3:17:16 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 858 ms
Apr 03, 2019 3:37:17 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Apr 03, 2019 3:37:51 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 34224 ms
Apr 03, 2019 3:37:57 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 6471 ms
Begin: Wed Apr 3 03:38:11 2019

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Wed Apr 3 03:38:11 2019
network size: 50000 nodes, 180000 links, 100000 weight
quality increased from -2.23889e-05 to 0.735631
end computation: Wed Apr 3 03:38:11 2019
level 1:
start computation: Wed Apr 3 03:38:11 2019
network size: 9910 nodes, 29730 links, 100000 weight
quality increased from 0.735631 to 0.883842
end computation: Wed Apr 3 03:38:11 2019
level 2:
start computation: Wed Apr 3 03:38:11 2019
network size: 4347 nodes, 13041 links, 100000 weight
quality increased from 0.883842 to 0.948919
end computation: Wed Apr 3 03:38:11 2019
level 3:
start computation: Wed Apr 3 03:38:11 2019
network size: 1895 nodes, 5685 links, 100000 weight
quality increased from 0.948919 to 0.976443
end computation: Wed Apr 3 03:38:11 2019
level 4:
start computation: Wed Apr 3 03:38:11 2019
network size: 837 nodes, 2511 links, 100000 weight
quality increased from 0.976443 to 0.987342
end computation: Wed Apr 3 03:38:11 2019
level 5:
start computation: Wed Apr 3 03:38:11 2019
network size: 369 nodes, 1107 links, 100000 weight
quality increased from 0.987342 to 0.989453
end computation: Wed Apr 3 03:38:11 2019
level 6:
start computation: Wed Apr 3 03:38:11 2019
network size: 196 nodes, 588 links, 100000 weight
quality increased from 0.989453 to 0.989453
end computation: Wed Apr 3 03:38:11 2019
End: Wed Apr 3 03:38:11 2019
Total duration: 0 sec
0.989453
Apr 03, 2019 3:38:34 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Apr 03, 2019 3:38:46 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Philosophers-PT-010000"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsm"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3954"
echo " Executing tool itstoolsm"
echo " Input is Philosophers-PT-010000, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r197-oct2-155272231700878"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Philosophers-PT-010000.tgz
mv Philosophers-PT-010000 execution
cd execution
if [ "CTLFireability" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "CTLFireability" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;