Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2019-input.r194-smll-155234739300291.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2019-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
....................
=====================================================================
Generated by BenchKit 2-3957
Executing tool itstoolsm
Input is Eratosthenes-PT-200, examination is GlobalProperties
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r194-smll-155234739300291
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 472K
-rw-r--r-- 1 mcc users 3.0K Feb 10 23:25 CTLCardinality.txt
-rw-r--r-- 1 mcc users 16K Feb 10 23:25 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K Feb 6 20:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 19K Feb 6 20:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 106 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 344 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.4K Feb 4 23:44 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K Feb 4 23:44 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K Feb 4 22:35 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.8K Feb 4 22:35 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.4K Feb 3 08:08 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 17K Feb 3 08:08 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 3.5K Jan 31 01:01 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 24K Jan 31 01:01 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 4 22:20 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Feb 4 22:20 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 4 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 311K Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Eratosthenes-PT-200-GlobalProperties-0

=== Now, execution of the tool begins

BK_START 1553752182799

Working with output stream class java.io.PrintStream
Flatten gal took : 305 ms
Constant places removed 2 places and 2 transitions.
Reduce isomorphic transitions removed 170 transitions.
Iterating post reduction 0 with 172 rules applied. Total rules applied 172 place count 151 transition count 527
Constant places removed 26 places and 26 transitions.
Iterating post reduction 1 with 26 rules applied. Total rules applied 198 place count 125 transition count 501
Applied a total of 198 rules in 18 ms. Remains 125 /153 variables (removed 28) and now considering 501/699 (removed 198) transitions.
Random walk for 250 k steps run took 39125 ms.
Normalized transition count is 125
// Phase 1: matrix 125 rows 125 cols
Random walk for 4 * 500 k steps run took 274928 ms.
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/GlobalProperties.pnml.gal, -t, CGAL, -ctl, DEADLOCK, --load-order, /home/mcc/execution/model.ord], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/GlobalProperties.pnml.gal -t CGAL -ctl DEADLOCK --load-order /home/mcc/execution/model.ord
Successfully loaded order from file /home/mcc/execution/model.ord
No direction supplied, using forward translation only.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,4.25353e+37,0.105968,7160,2,126,5,10018,6,0,754,2111,0


Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
dead,1,0.165036,7828,2,126,7,13787,9,1,2756,3583,2

System contains 1 deadlocks (shown below if less than --print-limit option) !
FORMULA Eratosthenes-PT-200-GlobalProperties-0 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
[ ]
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread was asked to interrupt. Dying gracefully.

BK_STOP 1553752503433

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ GlobalProperties = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution GlobalProperties -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination GlobalProperties -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 28, 2019 5:49:45 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, GlobalProperties, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt]
Mar 28, 2019 5:49:45 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 205 ms
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 199 places.
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 699 transitions.
Mar 28, 2019 5:49:46 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 52 ms
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.DomainAnalyzer computeVariableDomains
INFO: Found a total of 21 fixed domain variables (out of 199 variables) in GAL type Eratosthenes_PT_200
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: Found a total of 21 constant array cells/variables (out of 199 variables) in type Eratosthenes_PT_200
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: p181,p167,p193,p199,p101,p191,p179,p107,p103,p151,p149,p109,p163,p137,p173,p131,p197,p157,p139,p127,p113,
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.DomainAnalyzer computeVariableDomains
INFO: Found a total of 46 fixed domain variables (out of 199 variables) in GAL type Eratosthenes_PT_200
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: Found a total of 46 constant array cells/variables (out of 199 variables) in type Eratosthenes_PT_200
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: p181,p17,p59,p11,p167,p193,p199,p83,p43,p101,p89,p31,p53,p191,p41,p179,p107,p73,p67,p29,p13,p79,p97,p103,p151,p3,p61,p71,p2,p23,p149,p37,p19,p109,p163,p137,p5,p173,p131,p197,p7,p157,p139,p127,p47,p113,
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Removed 46 constant variables :p181=1, p17=1, p59=1, p11=1, p167=1, p193=1, p199=1, p83=1, p43=1, p101=1, p89=1, p31=1, p53=1, p191=1, p41=1, p179=1, p107=1, p73=1, p67=1, p29=1, p13=1, p79=1, p97=1, p103=1, p151=1, p3=1, p61=1, p71=1, p2=1, p23=1, p149=1, p37=1, p19=1, p109=1, p163=1, p137=1, p5=1, p173=1, p131=1, p197=1, p7=1, p157=1, p139=1, p127=1, p47=1, p113=1
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Simplified 323 expressions due to constant valuations.
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier evalInInitialState
WARNING: Unexpected boolean logic operator in evalInInitialState fr.lip6.move.gal.impl.EXImpl
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property Eratosthenes-PT-200-GlobalProperties-0 is trivially true : it is verified in initial state.
Mar 28, 2019 5:49:46 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 300 ms
Mar 28, 2019 5:49:46 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 9 ms
Mar 28, 2019 5:49:47 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 699 transitions.
Mar 28, 2019 5:55:01 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property Eratosthenes-PT-200-GlobalProperties-0 is trivially true : it is verified in initial state.
Mar 28, 2019 5:55:01 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 99 ms
Mar 28, 2019 5:55:01 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 501 transitions.
Mar 28, 2019 5:55:01 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 501 transitions.
Mar 28, 2019 5:55:01 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 125 places.
Mar 28, 2019 5:55:01 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 501 transitions.
Mar 28, 2019 5:55:01 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/GlobalProperties.pnml.gal : 4 ms
Mar 28, 2019 5:55:02 AM org.smtlib.impl.Script execute
WARNING: Script execution failed on command (define-fun _enabledsrc__389 ((src (Array Int Int))) Bool (>= (select src 32) 1)) with error (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
Skipping mayMatrices nes/nds Error when declaring system variables to SMT solver.(error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
java.lang.RuntimeException: Error when declaring system variables to SMT solver.(error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
at fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver.init(NextBMCSolver.java:93)
at fr.lip6.move.gal.gal2smt.bmc.KInductionSolver.init(KInductionSolver.java:59)
at fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver.init(NecessaryEnablingsolver.java:71)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printLabels(Gal2PinsTransformerNext.java:471)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printDependencyMatrix(Gal2PinsTransformerNext.java:209)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.buildBodyFile(Gal2PinsTransformerNext.java:85)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.transform(Gal2PinsTransformerNext.java:830)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:71)
at java.lang.Thread.run(Thread.java:748)
Mar 28, 2019 5:55:02 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 545ms conformant to PINS in folder :/home/mcc/execution

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Eratosthenes-PT-200"
export BK_EXAMINATION="GlobalProperties"
export BK_TOOL="itstoolsm"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3957"
echo " Executing tool itstoolsm"
echo " Input is Eratosthenes-PT-200, examination is GlobalProperties"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r194-smll-155234739300291"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Eratosthenes-PT-200.tgz
mv Eratosthenes-PT-200 execution
cd execution
if [ "GlobalProperties" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "GlobalProperties" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "GlobalProperties" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "GlobalProperties" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "GlobalProperties.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property GlobalProperties.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "GlobalProperties.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' GlobalProperties.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;