fond
Model Checking Contest 2019
9th edition, Prague, Czech Republic, April 7, 2019 (TOOLympics)
Execution of r096-smll-155246587500356
Last Updated
Apr 15, 2019

About the Execution of ITS-Tools for MAPKbis-PT-5320

Execution Summary
Max Memory
Used (MB)
Time wait (ms) CPU Usage (ms) I/O Wait (ms) Computed Result Execution
Status
384.750 8704.00 12094.00 411.20 TTTTTFTTFFTFFTFF normal

Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2019-input.r096-smll-155246587500356.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2019-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
.......................
=====================================================================
Generated by BenchKit 2-3957
Executing tool itstools
Input is MAPKbis-PT-5320, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r096-smll-155246587500356
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 364K
-rw-r--r-- 1 mcc users 4.5K Feb 11 22:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 22K Feb 11 22:58 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.1K Feb 7 23:51 CTLFireability.txt
-rw-r--r-- 1 mcc users 20K Feb 7 23:51 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 102 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 340 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.6K Feb 5 00:14 LTLCardinality.txt
-rw-r--r-- 1 mcc users 10K Feb 5 00:14 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.6K Feb 4 22:36 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K Feb 4 22:36 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.4K Feb 4 06:30 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K Feb 4 06:30 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.1K Feb 1 00:04 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 24K Feb 1 00:04 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 4 22:21 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 4 22:21 UpperBounds.xml

-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 5 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 0 Jan 29 09:34 model-fix.log
-rw-r--r-- 1 mcc users 166K Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-00
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-01
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-02
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-03
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-04
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-05
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-06
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-07
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-08
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-09
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-10
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-11
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-12
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-13
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-14
FORMULA_NAME MAPKbis-PT-5320-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1552887164792

Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903111103/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903111103/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,8.12646e+06,0.149481,7984,2,247,5,15136,6,0,555,11428,0


Converting to forward existential form...Done !
original formula: (AF(!(((((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_1>=1))&&(!((Proliferation_equals_1>=1)&&(p70_equals_0>=1)))))) * AG(!(((((Proliferation_equals_1>=1)&&(p21_equals_1>=1))&&((SMAD_equals_0>=1)&&(TGFBR_equals_1>=1)))&&(((MSK_equals_0>=1)&&(MYC_equals_1>=1))&&((Proliferation_equals_1>=1)&&(p70_equals_0>=1)))))))
=> equivalent forward existential formula: ([FwdG(Init,!(!(((((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_1>=1))&&(!((Proliferation_equals_1>=1)&&(p70_equals_0>=1)))))))] = FALSE * [(FwdU(Init,TRUE) * ((((Proliferation_equals_1>=1)&&(p21_equals_1>=1))&&((SMAD_equals_0>=1)&&(TGFBR_equals_1>=1)))&&(((MSK_equals_0>=1)&&(MYC_equals_1>=1))&&((Proliferation_equals_1>=1)&&(p70_equals_0>=1)))))] = FALSE)
(forward)formula 0,1,0.201281,8416,1,0,8,15136,19,1,2631,11428,6
FORMULA MAPKbis-PT-5320-CTLFireability-00 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: EF(AX(((((AKT_0>=1)&&(MAX_equals_1>=1))&&(MSK_equals_1>=1))&&(MYC_equals_0>=1))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(EX(!(((((AKT_0>=1)&&(MAX_equals_1>=1))&&(MSK_equals_1>=1))&&(MYC_equals_0>=1))))))] != FALSE
Reverse transition relation is NOT exact ! Due to transitions AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0, AP1_equals_1_to_AP1_equals_0_when_JUN_equals_0, ATF2_equals_1_to_ATF2_equals_0_when_JNK_equals_0_and_p38_equals_0, ATM_equals_0_to_ATM_equals_1_when_DNA_damage_equals_1, Apoptosis_equals_1_to_Apoptosis_equals_0_when_FOXO3_equals_0, Apoptosis_equals_1_to_Apoptosis_equals_0_when_p53_equals_0, CREB_equals_1_to_CREB_equals_0_when_MSK_equals_0, DUSP1_equals_1_to_DUSP1_equals_0_when_CREB_equals_0, ELK1_equals_1_to_ELK1_equals_0_when_ERK_equals_0_and_JNK_equals_0_and_p38_equals_0, FOXO3_equals_1_to_FOXO3_equals_0_when_JNK_equals_0, GADD45_equals_1_to_GADD45_equals_0_when_SMAD_equals_0_and_p53_equals_0, Growth_Arrest_equals_1_to_Growth_Arrest_equals_0_when_p21_equals_0, JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_0_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0, JUN_equals_1_to_JUN_equals_0_when_JNK_equals_0, MAX_equals_1_to_MAX_equals_0_when_p38_equals_0, MDM2_equals_1_to_MDM2_equals_0_when_AKT_equals_0_and_p53_equals_0, MSK_equals_1_to_MSK_equals_0_when_ERK_equals_0_and_p38_equals_0, MTK1_equals_0_to_MTK1_equals_1_when_GADD45_equals_1, MTK1_equals_1_to_MTK1_equals_0_when_GADD45_equals_0, MYC_equals_1_to_MYC_equals_0_when_AKT_equals_0_and_MAX_equals_0, MYC_equals_1_to_MYC_equals_0_when_MSK_equals_0, PPP2CA_equals_1_to_PPP2CA_equals_0_when_p38_equals_0, PTEN_equals_1_to_PTEN_equals_0_when_p53_equals_0, TAOK_equals_0_to_TAOK_equals_1_when_ATM_equals_1, p14_equals_1_to_p14_equals_0_when_MYC_equals_0, p21_equals_1_to_p21_equals_0_when_p53_equals_0, p38_equals_1_to_p38_equals_0_when_DUSP1_equals_0_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0, p38_equals_1_to_p38_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0, p38_equals_1_to_p38_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAOK_equals_0, p53_equals_0_to_p53_equals_1_when_ATM_equals_1_and_MDM2_equals_0, p53_equals_0_to_p53_equals_1_when_ATM_equals_1_and_p38_equals_1, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :106/32/31/169
(forward)formula 1,1,0.268066,9476,1,0,166,18155,259,69,3259,21139,243
FORMULA MAPKbis-PT-5320-CTLFireability-01 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: EF(AG(AX(((SMAD_equals_0>=1)&&(TGFBR_equals_1>=1)))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !(!(EX(!(((SMAD_equals_0>=1)&&(TGFBR_equals_1>=1)))))))))] != FALSE
(forward)formula 2,1,0.288211,10004,1,0,173,20879,266,75,3301,25446,254
FORMULA MAPKbis-PT-5320-CTLFireability-02 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: (E(!(((((((AP1_equals_0>=1)&&(MAP3K1_3_equals_0>=1))&&(MEK1_2_equals_0>=1))&&(PPP2CA_equals_0>=1))&&(RAF_equals_1>=1))&&(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&(p38_equals_1>=1)))) U EF(((FOXO3_equals_1>=1)&&(JNK_equals_0>=1)))) + (((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))
=> equivalent forward existential formula: ([(FwdU(FwdU(Init,!(((((((AP1_equals_0>=1)&&(MAP3K1_3_equals_0>=1))&&(MEK1_2_equals_0>=1))&&(PPP2CA_equals_0>=1))&&(RAF_equals_1>=1))&&(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&(p38_equals_1>=1))))),TRUE) * ((FOXO3_equals_1>=1)&&(JNK_equals_0>=1)))] != FALSE + [(Init * (((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))] != FALSE)
(forward)formula 3,1,0.395214,12908,1,0,175,33312,270,76,3463,35537,260
FORMULA MAPKbis-PT-5320-CTLFireability-03 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: (EX(((EGFR_equals_1>=1)&&(GRB2_equals_0>=1))) + AG(!(EF(((EGFR_equals_1>=1)&&(PKC_equals_1>=1))))))
=> equivalent forward existential formula: [(FwdU(FwdU((Init * !(EX(((EGFR_equals_1>=1)&&(GRB2_equals_0>=1))))),TRUE),TRUE) * ((EGFR_equals_1>=1)&&(PKC_equals_1>=1)))] = FALSE
(forward)formula 4,1,0.395755,12908,1,0,175,33312,271,76,3463,35537,260
FORMULA MAPKbis-PT-5320-CTLFireability-04 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: EX(AF(((!(((GAB1_equals_1>=1)&&(GRB2_equals_0>=1))&&(PI3K_equals_0>=1)))&&(((((AP1_equals_0>=1)&&(ATF2_equals_0>=1))&&(FOS_equals_1>=1))&&(JUN_equals_1>=1))||((PTEN_equals_0>=1)&&(p53_equals_1>=1))))))
=> equivalent forward existential formula: [(EY(Init) * !(EG(!(((!(((GAB1_equals_1>=1)&&(GRB2_equals_0>=1))&&(PI3K_equals_0>=1)))&&(((((AP1_equals_0>=1)&&(ATF2_equals_0>=1))&&(FOS_equals_1>=1))&&(JUN_equals_1>=1))||((PTEN_equals_0>=1)&&(p53_equals_1>=1))))))))] != FALSE
(forward)formula 5,0,1.1212,36092,1,0,485,153794,277,220,3482,240817,617
FORMULA MAPKbis-PT-5320-CTLFireability-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EF(!(EF((((MYC_equals_0>=1)&&(p14_equals_1>=1))&&((((AKT_0>=1)&&(ERK_equals_0>=1))&&(RAF_equals_0>=1))&&(RAS_equals_1>=1))))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U (((MYC_equals_0>=1)&&(p14_equals_1>=1))&&((((AKT_0>=1)&&(ERK_equals_0>=1))&&(RAF_equals_0>=1))&&(RAS_equals_1>=1))))))] != FALSE
(forward)formula 6,1,1.12335,36356,1,0,485,153794,278,220,3486,240817,618
FORMULA MAPKbis-PT-5320-CTLFireability-06 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: EX(!(EF((((GAB1_equals_0>=1)&&(PI3K_equals_1>=1))&&(SOS_equals_0>=1)))))
=> equivalent forward existential formula: [(EY(Init) * !(E(TRUE U (((GAB1_equals_0>=1)&&(PI3K_equals_1>=1))&&(SOS_equals_0>=1)))))] != FALSE
(forward)formula 7,1,1.12461,36356,1,0,485,153794,279,221,3487,240832,619
FORMULA MAPKbis-PT-5320-CTLFireability-07 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: (!((AG(!((((AKT_equals_1>=1)&&(MSK_equals_1>=1))&&(MYC_equals_0>=1)))) + (AX(((AKT_equals_1>=1)&&(FOXO3_equals_1>=1))) * ((((AKT_0>=1)&&(ERK_equals_0>=1))&&(PKC_equals_1>=1))&&(RAF_equals_0>=1))))) + A(AF(((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1))) U EX(((ATF2_equals_0>=1)&&(p38_equals_1>=1)))))
=> equivalent forward existential formula: (([(EY((Init * !(!(E(TRUE U !(!((((AKT_equals_1>=1)&&(MSK_equals_1>=1))&&(MYC_equals_0>=1))))))))) * !(((AKT_equals_1>=1)&&(FOXO3_equals_1>=1))))] != FALSE + [((Init * !(!(E(TRUE U !(!((((AKT_equals_1>=1)&&(MSK_equals_1>=1))&&(MYC_equals_0>=1)))))))) * !(((((AKT_0>=1)&&(ERK_equals_0>=1))&&(PKC_equals_1>=1))&&(RAF_equals_0>=1))))] != FALSE) + [((Init * !(EG(!(EX(((ATF2_equals_0>=1)&&(p38_equals_1>=1))))))) * !(E(!(EX(((ATF2_equals_0>=1)&&(p38_equals_1>=1)))) U (!(!(EG(!(((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1)))))) * !(EX(((ATF2_equals_0>=1)&&(p38_equals_1>=1))))))))] != FALSE)
Using saturation style SCC detection
(forward)formula 8,0,2.95545,95584,1,0,1107,444888,297,571,3545,767132,1285
FORMULA MAPKbis-PT-5320-CTLFireability-08 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AG(E(!((((DUSP1_equals_0>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_1>=1))) U (((PPP2CA_equals_1>=1)&&(p38_equals_0>=1))||((ERK_equals_0>=1)&&(FOS_equals_1>=1)))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(!((((DUSP1_equals_0>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_1>=1))) U (((PPP2CA_equals_1>=1)&&(p38_equals_0>=1))||((ERK_equals_0>=1)&&(FOS_equals_1>=1))))))] = FALSE
(forward)formula 9,0,3.02847,97960,1,0,1128,456674,300,586,3552,784808,1322
FORMULA MAPKbis-PT-5320-CTLFireability-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: (AG(!((((((ERK_equals_1>=1)&&(PDK1_equals_1>=1))&&(p70_equals_0>=1))||((((ATM_equals_1>=1)&&(MDM2_equals_1>=1))&&(p38_equals_0>=1))&&(p53_equals_1>=1)))&&((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_1>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1))))) * ((EF(((((PI3K_equals_0>=1)&&(RAS_equals_1>=1))&&(SOS_equals_1>=1))&&(((GAB1_equals_1>=1)&&(GRB2_equals_0>=1))&&(PI3K_equals_0>=1)))) + EG(!(((RAS_equals_0>=1)&&(SOS_equals_1>=1))))) + (EF(((((((DUSP1_equals_1>=1)&&(JNK_equals_1>=1))&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&((ELK1_equals_0>=1)&&(p38_equals_1>=1)))) + (((!((Apoptosis_equals_1>=1)&&(ERK_equals_1>=1)))||(!(((DUSP1_equals_0>=1)&&(MAP3K1_3_equals_1>=1))&&(p38_equals_0>=1))))&&((!((AKT_equals_1>=1)&&(FOXO3_equals_1>=1)))&&(((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_1>=1)))))))
=> equivalent forward existential formula: ([(FwdU(Init,TRUE) * (((((ERK_equals_1>=1)&&(PDK1_equals_1>=1))&&(p70_equals_0>=1))||((((ATM_equals_1>=1)&&(MDM2_equals_1>=1))&&(p38_equals_0>=1))&&(p53_equals_1>=1)))&&((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_1>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1))))] = FALSE * [(((Init * !((E(TRUE U ((((((DUSP1_equals_1>=1)&&(JNK_equals_1>=1))&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&((ELK1_equals_0>=1)&&(p38_equals_1>=1)))) + (((!((Apoptosis_equals_1>=1)&&(ERK_equals_1>=1)))||(!(((DUSP1_equals_0>=1)&&(MAP3K1_3_equals_1>=1))&&(p38_equals_0>=1))))&&((!((AKT_equals_1>=1)&&(FOXO3_equals_1>=1)))&&(((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_1>=1))))))) * !(EG(!(((RAS_equals_0>=1)&&(SOS_equals_1>=1)))))) * !(E(TRUE U ((((PI3K_equals_0>=1)&&(RAS_equals_1>=1))&&(SOS_equals_1>=1))&&(((GAB1_equals_1>=1)&&(GRB2_equals_0>=1))&&(PI3K_equals_0>=1))))))] = FALSE)
(forward)formula 10,1,3.16986,102448,1,0,1207,475961,305,665,3561,822056,1488
FORMULA MAPKbis-PT-5320-CTLFireability-10 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: (E(EF((((AKT_0>=1)&&(FOXO3_equals_0>=1))&&(JNK_equals_1>=1))) U ((((ELK1_equals_0>=1)&&(ERK_equals_1>=1))&&((TAK1_equals_0>=1)&&(TGFBR_equals_1>=1)))&&((((AKT_equals_1>=1)&&(MSK_equals_1>=1))&&(MYC_equals_0>=1))&&((JNK_equals_0>=1)&&(JUN_equals_1>=1))))) + (((DUSP1_equals_0>=1)&&(JNK_equals_0>=1))&&(TAOK_equals_1>=1)))
=> equivalent forward existential formula: ([(FwdU(Init,E(TRUE U (((AKT_0>=1)&&(FOXO3_equals_0>=1))&&(JNK_equals_1>=1)))) * ((((ELK1_equals_0>=1)&&(ERK_equals_1>=1))&&((TAK1_equals_0>=1)&&(TGFBR_equals_1>=1)))&&((((AKT_equals_1>=1)&&(MSK_equals_1>=1))&&(MYC_equals_0>=1))&&((JNK_equals_0>=1)&&(JUN_equals_1>=1)))))] != FALSE + [(Init * (((DUSP1_equals_0>=1)&&(JNK_equals_0>=1))&&(TAOK_equals_1>=1)))] != FALSE)
(forward)formula 11,0,3.1713,102712,1,0,1208,475998,307,665,3563,822056,1489
FORMULA MAPKbis-PT-5320-CTLFireability-11 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EF(EX(((((ERK_equals_0>=1)&&(p70_equals_1>=1))&&(((ATM_equals_1>=1)&&(p38_equals_1>=1))&&(p53_equals_0>=1)))&&(((AKT_0>=1)&&(MDM2_equals_1>=1))&&(p53_equals_0>=1)))))
=> equivalent forward existential formula: [(EY(FwdU(Init,TRUE)) * ((((ERK_equals_0>=1)&&(p70_equals_1>=1))&&(((ATM_equals_1>=1)&&(p38_equals_1>=1))&&(p53_equals_0>=1)))&&(((AKT_0>=1)&&(MDM2_equals_1>=1))&&(p53_equals_0>=1))))] != FALSE
(forward)formula 12,0,3.17209,102712,1,0,1208,475998,308,665,3564,822056,1489
FORMULA MAPKbis-PT-5320-CTLFireability-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: !(AX(EF((((AKT_equals_1>=1)&&(PDK1_equals_0>=1))&&(((DUSP1_equals_0>=1)&&(MTK1_equals_1>=1))&&(p38_equals_0>=1))))))
=> equivalent forward existential formula: [(EY(Init) * !(E(TRUE U (((AKT_equals_1>=1)&&(PDK1_equals_0>=1))&&(((DUSP1_equals_0>=1)&&(MTK1_equals_1>=1))&&(p38_equals_0>=1))))))] != FALSE
(forward)formula 13,1,3.1736,102712,1,0,1208,475998,309,665,3568,822056,1490
FORMULA MAPKbis-PT-5320-CTLFireability-13 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: AG((E(((AP1_equals_1>=1)&&(MEK1_2_equals_1>=1)) U ((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1))) + EX(!(((ELK1_equals_0>=1)&&(ERK_equals_1>=1))))))
=> equivalent forward existential formula: [((FwdU(Init,TRUE) * !(EX(!(((ELK1_equals_0>=1)&&(ERK_equals_1>=1)))))) * !(E(((AP1_equals_1>=1)&&(MEK1_2_equals_1>=1)) U ((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))))] = FALSE
(forward)formula 14,0,3.17644,102712,1,0,1208,475998,316,665,3573,822059,1493
FORMULA MAPKbis-PT-5320-CTLFireability-14 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: (((CREB_equals_1>=1)&&(MSK_equals_0>=1)) + (EF(((FRS2_equals_1>=1)&&(GRB2_equals_1>=1))) + ((((AP1_equals_1>=1)&&(MEK1_2_equals_1>=1))&&(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))||((((DUSP1_equals_0>=1)&&(TAK1_equals_1>=1))&&(p38_equals_0>=1))&&((((AKT_0>=1)&&(ERK_equals_0>=1))&&(RAF_equals_0>=1))&&(RAS_equals_1>=1))))))
=> equivalent forward existential formula: ([(Init * ((CREB_equals_1>=1)&&(MSK_equals_0>=1)))] != FALSE + ([(FwdU(Init,TRUE) * ((FRS2_equals_1>=1)&&(GRB2_equals_1>=1)))] != FALSE + [(Init * ((((AP1_equals_1>=1)&&(MEK1_2_equals_1>=1))&&(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))||((((DUSP1_equals_0>=1)&&(TAK1_equals_1>=1))&&(p38_equals_0>=1))&&((((AKT_0>=1)&&(ERK_equals_0>=1))&&(RAF_equals_0>=1))&&(RAS_equals_1>=1)))))] != FALSE))
(forward)formula 15,0,3.17848,102976,1,0,1209,476072,319,665,3576,822059,1494
FORMULA MAPKbis-PT-5320-CTLFireability-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************


BK_STOP 1552887173496

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -smt]
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 98 ms
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 106 places.
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 173 transitions.
Mar 18, 2019 5:32:48 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 27 ms
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.instantiate.DomainAnalyzer computeVariableDomains
INFO: Found a total of 8 fixed domain variables (out of 106 variables) in GAL type MAPKbis_PT_5320
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: Found a total of 8 constant array cells/variables (out of 106 variables) in type MAPKbis_PT_5320
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: EGFR_stimulus_equals_0,TGFBR_stimulus_equals_1,TGFBR_stimulus_equals_0,FGFR3_stimulus_equals_1,DNA_damage_equals_0,DNA_damage_equals_1,EGFR_stimulus_equals_1,FGFR3_stimulus_equals_0,
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Removed 8 constant variables :EGFR_stimulus_equals_0=1, TGFBR_stimulus_equals_1=0, TGFBR_stimulus_equals_0=1, FGFR3_stimulus_equals_1=0, DNA_damage_equals_0=0, DNA_damage_equals_1=1, EGFR_stimulus_equals_1=0, FGFR3_stimulus_equals_0=1
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Simplified 9 expressions due to constant valuations.
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.instantiate.Simplifier simplifyFalseTransitions
INFO: Removed 4 false transitions.
Mar 18, 2019 5:32:48 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 144 ms
Mar 18, 2019 5:32:48 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 7 ms
Mar 18, 2019 5:32:48 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 3 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5320"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3957"
echo " Executing tool itstools"
echo " Input is MAPKbis-PT-5320, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r096-smll-155246587500356"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5320.tgz
mv MAPKbis-PT-5320 execution
cd execution
if [ "CTLFireability" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "CTLFireability" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;