fond
Model Checking Contest 2019
9th edition, Prague, Czech Republic, April 7, 2019 (TOOLympics)
Execution of r096-smll-155246587500348
Last Updated
Apr 15, 2019

About the Execution of ITS-Tools for MAPKbis-PT-5310

Execution Summary
Max Memory
Used (MB)
Time wait (ms) CPU Usage (ms) I/O Wait (ms) Computed Result Execution
Status
11736.050 3600000.00 9704638.00 6580.60 FTFFFTFTFFFFFF?F normal

Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2019-input.r096-smll-155246587500348.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2019-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
.....................
=====================================================================
Generated by BenchKit 2-3957
Executing tool itstools
Input is MAPKbis-PT-5310, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r096-smll-155246587500348
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 364K
-rw-r--r-- 1 mcc users 4.4K Feb 11 22:53 CTLCardinality.txt
-rw-r--r-- 1 mcc users 22K Feb 11 22:53 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.7K Feb 7 23:45 CTLFireability.txt
-rw-r--r-- 1 mcc users 22K Feb 7 23:45 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 102 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 340 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.8K Feb 5 00:14 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K Feb 5 00:14 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.5K Feb 4 22:36 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K Feb 4 22:36 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.5K Feb 4 06:27 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 21K Feb 4 06:27 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 5.8K Feb 1 00:01 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 1 00:01 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Feb 4 22:21 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 4 22:21 UpperBounds.xml

-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 5 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 0 Jan 29 09:34 model-fix.log
-rw-r--r-- 1 mcc users 166K Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-00
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-01
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-02
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-03
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-04
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-05
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-06
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-07
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-08
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-09
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-10
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-11
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-12
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-13
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-14
FORMULA_NAME MAPKbis-PT-5310-LTLCardinality-15

=== Now, execution of the tool begins

BK_START 1552886287445

Working with output stream class java.io.PrintStream
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903111103/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903111103/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !((F("(AP1_equals_0>=3)")))
Formula 0 simplified : !F"(AP1_equals_0>=3)"
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
Normalized transition count is 95
// Phase 1: matrix 95 rows 98 cols
invariant :EGFR_equals_0 + EGFR_equals_1 = 1
invariant :GAB1_equals_0 + GAB1_equals_1 = 1
invariant :MYC_equals_0 + MYC_equals_1 = 1
invariant :MEK1_2_equals_0 + MEK1_2_equals_1 = 1
invariant :RSK_equals_0 + RSK_equals_1 = 1
invariant :FRS2_equals_0 + FRS2_equals_1 = 1
invariant :Growth_Arrest_equals_0 + Growth_Arrest_equals_1 = 1
invariant :JNK_equals_0 + JNK_equals_1 = 1
invariant :SPRY_equals_0 + SPRY_equals_1 = 1
invariant :p38_equals_0 + p38_equals_1 = 1
invariant :FGFR3_equals_0 + FGFR3_equals_1 = 1
invariant :MSK_equals_0 + MSK_equals_1 = 1
invariant :RAS_equals_0 + RAS_equals_1 = 1
invariant :MAP3K1_3_equals_0 + MAP3K1_3_equals_1 = 1
invariant :CREB_equals_0 + CREB_equals_1 = 1
invariant :p14_equals_0 + p14_equals_1 = 1
invariant :TGFBR_equals_0 + TGFBR_equals_1 = 1
invariant :PTEN_equals_0 + PTEN_equals_1 = 1
invariant :MTK1_equals_0 + MTK1_equals_1 = 1
invariant :PLCG_equals_0 + PLCG_equals_1 = 1
invariant :ELK1_equals_0 + ELK1_equals_1 = 1
invariant :PI3K_equals_0 + PI3K_equals_1 = 1
invariant :SMAD_equals_0 + SMAD_equals_1 = 1
invariant :RAF_equals_0 + RAF_equals_1 = 1
invariant :AKT_0 + AKT_equals_1 = 1
invariant :ATF2_equals_0 + ATF2_equals_1 = 1
invariant :TAK1_equals_0 + TAK1_equals_1 = 1
invariant :GADD45_equals_0 + GADD45_equals_1 = 1
invariant :GRB2_equals_0 + GRB2_equals_1 = 1
invariant :PPP2CA_equals_0 + PPP2CA_equals_1 = 1
invariant :FOXO3_equals_0 + FOXO3_equals_1 = 1
invariant :Apoptosis_equals_0 + Apoptosis_equals_1 = 1
invariant :DUSP1_equals_0 + DUSP1_equals_1 = 1
invariant :PKC_equals_0 + PKC_equals_1 = 1
invariant :FOS_equals_0 + FOS_equals_1 = 1
invariant :Proliferation_equals_0 + Proliferation_equals_1 = 1
invariant :JUN_equals_0 + JUN_equals_1 = 1
invariant :p53_equals_0 + p53_equals_1 = 1
invariant :p70_equals_0 + p70_equals_1 = 1
invariant :PDK1_equals_0 + PDK1_equals_1 = 1
invariant :p21_equals_0 + p21_equals_1 = 1
invariant :AP1_equals_0 + AP1_equals_1 = 1
invariant :SOS_equals_0 + SOS_equals_1 = 1
invariant :ATM_equals_0 + ATM_equals_1 = 1
invariant :ERK_equals_0 + ERK_equals_1 = 1
invariant :MAX_equals_0 + MAX_equals_1 = 1
invariant :TAOK_equals_0 + TAOK_equals_1 = 1
invariant :MDM2_equals_0 + MDM2_equals_1 = 1
invariant :BCL2_equals_0 + BCL2_equals_1 = 1
Reverse transition relation is NOT exact ! Due to transitions EGFR_equals_1_to_EGFR_equals_0_when_GRB2_equals_1, EGFR_equals_1_to_EGFR_equals_0_when_PKC_equals_1, ERK_equals_0_to_ERK_equals_1_when_MEK1_2_equals_1, GADD45_equals_0_to_GADD45_equals_1_when_p53_equals_1, MAP3K1_3_equals_1_to_MAP3K1_3_equals_0_when_RAS_equals_0, MEK1_2_equals_1_to_MEK1_2_equals_0_when_AP1_equals_1, MEK1_2_equals_1_to_MEK1_2_equals_0_when_PPP2CA_equals_1, MTK1_equals_1_to_MTK1_equals_0_when_GADD45_equals_0, PKC_equals_1_to_PKC_equals_0_when_PLCG_equals_0, PLCG_equals_0_to_PLCG_equals_1_when_EGFR_equals_1, PPP2CA_equals_1_to_PPP2CA_equals_0_when_p38_equals_0, RAS_equals_0_to_RAS_equals_1_when_PLCG_equals_1, RAS_equals_0_to_RAS_equals_1_when_SOS_equals_1, RSK_equals_1_to_RSK_equals_0_when_ERK_equals_0, SOS_equals_1_to_SOS_equals_0_when_GRB2_equals_0, SOS_equals_1_to_SOS_equals_0_when_RSK_equals_1, p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_MAP3K1_3_equals_1, p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_MTK1_equals_1, p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1, p53_equals_1_to_p53_equals_0_when_ATM_equals_0_and_MDM2_equals_1, p53_equals_1_to_p53_equals_0_when_ATM_equals_0_and_p38_equals_0, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :36/111/21/168
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
Compilation finished in 2642 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 52 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, <>((LTLAP0==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 253 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-00 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, (<>(<>((LTLAP1==true))))U(X(<>((LTLAP2==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 101 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-01 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, (LTLAP3==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 134 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-02 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, []((<>((LTLAP4==true)))U(<>((LTLAP5==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 786 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-03 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, <>(<>(((LTLAP6==true))U(false))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 649 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-04 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, (LTLAP7==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 337 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-05 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, X(false), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 381 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-06 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, (((LTLAP8==true))U((LTLAP9==true)))U(((LTLAP10==true))U((LTLAP11==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 334 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-07 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, <>((LTLAP12==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 151 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-08 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, (((LTLAP13==true))U((LTLAP14==true)))U([]((LTLAP15==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 305 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-09 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, <>(X(<>(<>((LTLAP16==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 266 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-10 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, [](<>((LTLAP17==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 138 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-11 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, X(X(<>([]((LTLAP18==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 258 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-12 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, [](((LTLAP1==true))U(<>((LTLAP19==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 351 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-13 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, []((LTLAP20==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, []((LTLAP20==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, X(X([]((LTLAP21==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 330 ms.
FORMULA MAPKbis-PT-5310-LTLCardinality-15 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Retrying LTSmin with larger timeout 1800 s
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, []((LTLAP20==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>1800 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, []((LTLAP20==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 18, 2019 5:18:10 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -smt]
Mar 18, 2019 5:18:10 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 18, 2019 5:18:10 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 79 ms
Mar 18, 2019 5:18:10 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 106 places.
Mar 18, 2019 5:18:10 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 173 transitions.
Mar 18, 2019 5:18:10 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 23 ms
Mar 18, 2019 5:18:11 AM fr.lip6.move.gal.instantiate.DomainAnalyzer computeVariableDomains
INFO: Found a total of 8 fixed domain variables (out of 106 variables) in GAL type MAPKbis_PT_5310
Mar 18, 2019 5:18:11 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: Found a total of 8 constant array cells/variables (out of 106 variables) in type MAPKbis_PT_5310
Mar 18, 2019 5:18:11 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: EGFR_stimulus_equals_0,TGFBR_stimulus_equals_1,TGFBR_stimulus_equals_0,FGFR3_stimulus_equals_1,DNA_damage_equals_0,DNA_damage_equals_1,EGFR_stimulus_equals_1,FGFR3_stimulus_equals_0,
Mar 18, 2019 5:18:11 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Removed 8 constant variables :EGFR_stimulus_equals_0=0, TGFBR_stimulus_equals_1=0, TGFBR_stimulus_equals_0=1, FGFR3_stimulus_equals_1=0, DNA_damage_equals_0=1, DNA_damage_equals_1=0, EGFR_stimulus_equals_1=1, FGFR3_stimulus_equals_0=1
Mar 18, 2019 5:18:11 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Simplified 12 expressions due to constant valuations.
Mar 18, 2019 5:18:11 AM fr.lip6.move.gal.instantiate.Simplifier simplifyFalseTransitions
INFO: Removed 5 false transitions.
Mar 18, 2019 5:18:11 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 113 ms
Mar 18, 2019 5:18:11 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 5 ms
Mar 18, 2019 5:18:11 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 2 ms
Mar 18, 2019 5:18:11 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 168 transitions.
Mar 18, 2019 5:18:11 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 49 place invariants in 36 ms
Mar 18, 2019 5:18:12 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 98 variables to be positive in 359 ms
Mar 18, 2019 5:18:12 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 168 transitions.
Mar 18, 2019 5:18:12 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/168 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Mar 18, 2019 5:18:12 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 22 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Mar 18, 2019 5:18:12 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 168 transitions.
Mar 18, 2019 5:18:12 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 28 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Mar 18, 2019 5:18:12 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 168 transitions.
Mar 18, 2019 5:18:15 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(90/168) took 2263 ms. Total solver calls (SAT/UNSAT): 1651(679/972)
Mar 18, 2019 5:18:16 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 3588 ms. Total solver calls (SAT/UNSAT): 2205(900/1305)
Mar 18, 2019 5:18:16 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 168 transitions.
Mar 18, 2019 5:18:16 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed DNA matrix. took 10 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Mar 18, 2019 5:18:16 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 5251ms conformant to PINS in folder :/home/mcc/execution

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5310"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3957"
echo " Executing tool itstools"
echo " Input is MAPKbis-PT-5310, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r096-smll-155246587500348"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5310.tgz
mv MAPKbis-PT-5310 execution
cd execution
if [ "LTLCardinality" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "LTLCardinality" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;