Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/local/x2003239/mcc2019-input.r016-csrt-155225064900039.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2019-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.....................
=====================================================================
Generated by BenchKit 2-3954
Executing tool lola
Input is Angiogenesis-PT-20, examination is GlobalProperties
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r016-csrt-155225064900039
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 192K
-rw-r--r-- 1 mcc users 3.4K Feb 9 06:49 CTLCardinality.txt
-rw-r--r-- 1 mcc users 17K Feb 9 06:49 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Feb 5 03:34 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K Feb 5 03:34 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 105 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 343 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.8K Feb 4 22:53 LTLCardinality.txt
-rw-r--r-- 1 mcc users 13K Feb 4 22:53 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K Feb 4 22:32 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.0K Feb 4 22:32 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K Feb 2 00:15 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K Feb 2 00:15 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.6K Jan 29 11:29 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 16K Jan 29 11:29 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 4 22:18 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 4 22:18 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 3 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 33K Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-20-GlobalProperties-0

=== Now, execution of the tool begins

BK_START 1552500388897

info: Time: 3600 - MCC
vrfy: Checking GlobalProperties @ Angiogenesis-PT-20 @ 3570 seconds

FORMULA Angiogenesis-PT-20-GlobalProperties-0 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT SAT_SMT STATE_COMPRESSION STUBBORN_SETS SYMMETRIES TOPOLOGICAL USE_NUPN UNFOLDING_TO_PT
vrfy: finished
info: timeLeft: 3520
rslt: Output for GlobalProperties @ Angiogenesis-PT-20

{
"build":
{
"architecture": 64,
"assertions": false,
"build_hostname": "mcc2019",
"build_system": "x86_64-unknown-linux-gnu",
"optimizations": true,
"package_version": "2.0",
"svn_version": "3189M"
},
"call":
{
"exec_host": "mcc2019",
"markinglimit": null,
"parameters":
[
"--pnmlnet",
"model.pnml",
"--xmlformula",
"--formula=GlobalProperties.xml",
"--mcc",
"--donotcomputecapacities",
"--encoder=simplecompressed",
"--check=modelchecking",
"--stubborn=combined",
"--siphontrap=par",
"--siphondepth=10",
"--findpath=par",
"--retrylimit=0",
"--depthlimit=1000000",
"--symmetry",
"--symmtimelimit=300",
"--threads=2",
"--symmetrydepth=1073741824",
"--timelimit=3570",
"--json=GlobalProperties.json",
"--jsoninclude=formula,formulastat,net"
],
"starttime": "Wed Mar 13 18:06:29 2019
",
"timelimit": 3570
},
"child": null,
"exit":
{
"error": null,
"memory": 833880,
"runtime": 49.000000,
"signal": null,
"timelimitreached": false
},
"files":
{
"formula": "GlobalProperties.xml",
"net": "model.pnml"
},
"formula":
{
"count":
{
"A": 0,
"E": 1,
"F": 1,
"G": 0,
"U": 0,
"X": 0,
"aconj": 0,
"adisj": 0,
"aneg": 0,
"comp": 0,
"cont": 0,
"dl": 1,
"fir": 0,
"nodl": 0,
"place_references": 0,
"taut": 0,
"tconj": 0,
"tdisj": 0,
"tneg": 0,
"transition_references": 0,
"unfir": 0,
"visible_places": 0,
"visible_transitions": 0
},
"processed": "E (F (DEADLOCK))",
"processed_size": 16,
"rewrites": 1,
"skeleton": "E(F(**))"
},
"net":
{
"arcs": 185,
"conflict_clusters": 19,
"places": 39,
"places_significant": 31,
"singleton_clusters": 0,
"transitions": 64
},
"result":
{
"edges": 18703869,
"markings": 10107625,
"produced_by": "state space",
"value": true
},
"task":
{
"findpath":
{
"depthlimit": 1000000,
"retrylimit": null,
"stubborn":
{
"type": "reachability preserving/insertion"
},
"threads": 2
},
"search":
{
"store":
{
"encoder": "simple compression",
"type": "prefix"
},
"stubborn":
{
"type": "reachability preserving/insertion"
},
"symmetry":
{
"card": 1.000000,
"composed": 0,
"dead_branches": 0,
"generators": 0,
"interrupted": false,
"real_computed": 0,
"timelimit": 300
},
"threads": 2,
"type": "dfs"
},
"type": "reachability",
"workflow": "findpath||search"
}
}
lola: LoLA will run for 3570 seconds at most (--timelimit)
lola: NET
lola: input: PNML file (--pnml)
lola: reading net from model.pnml
lola: reading pnml
lola: PNML file contains place/transition net
lola: finished parsing
lola: closed net file model.pnml
lola: 103/268435456 symbol table entries, 0 collisions
lola: preprocessing...
lola: Size of bit vector: 1248
lola: finding significant places
lola: 39 places, 64 transitions, 31 significant places
lola: compute conflict clusters
lola: computed conflict clusters
lola: Computing conflicting sets
lola: Computing back conflicting sets
lola: TASK
lola: Reading formula in XML format (--xmlformula)
lola: reading pnml
lola: reading formula from GlobalProperties.xml
lola: E (F (DEADLOCK))
lola: checking reachability
lola: Planning: workflow for reachability check: findpath||search (--findpath=par)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F (DEADLOCK))
lola: processed formula length: 16
lola: 1 rewrites
lola: closed formula file GlobalProperties.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: SEARCH (findpath)
lola: findpath: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: findpath: starting randomized, memory-less exploration (--findpath)
lola: findpath: searching for paths with maximal depth 1000000 (--depthlimit)
lola: findpath: no retry limit given (--retrylimit)
lola: findpath: transitions are chosen hash-driven
lola: computing symmetries (--symmetry)
lola: time limit for symmetry computation of 300 seconds given (--symmtimelimit)
lola: computed 0 generators (0 in search tree, 0 by composition)
lola: representing 1 symmetries
lola: 0 dead branches visited in search tree
lola: 5 tries, 4424607 fired transitions, 0 secs || 1274872 markings, 2258078 edges, 254974 markings/sec, 0 secs
lola: 10 tries, 9170829 fired transitions, 5 secs || 2457038 markings, 4409536 edges, 236433 markings/sec, 5 secs
lola: 14 tries, 13937035 fired transitions, 10 secs || 3668006 markings, 6628082 edges, 242194 markings/sec, 10 secs
lola: 19 tries, 18584189 fired transitions, 15 secs || 4852221 markings, 8814003 edges, 236843 markings/sec, 15 secs
lola: 24 tries, 23413521 fired transitions, 20 secs || 5953622 markings, 10855307 edges, 220280 markings/sec, 20 secs
lola: 29 tries, 28504365 fired transitions, 25 secs || 6978335 markings, 12768438 edges, 204943 markings/sec, 25 secs
lola: 34 tries, 33512941 fired transitions, 30 secs || 8011798 markings, 14709598 edges, 206693 markings/sec, 30 secs
lola: 39 tries, 38510673 fired transitions, 35 secs || 9045541 markings, 16679821 edges, 206749 markings/sec, 35 secs
lola: 44 tries, 43414400 fired transitions, 40 secs || 10095016 markings, 18679824 edges, 209895 markings/sec, 40 secs
lola: RESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 10107625 markings, 18703869 edges
lola: memory consumption: 833880 KB
lola: time consumption: 49 seconds
lola: print data as JSON (--json)
lola: writing JSON to GlobalProperties.json
lola: closed JSON file GlobalProperties.json
rslt: finished

BK_STOP 1552500438957

--------------------
content from stderr:

grep: GenericPropertiesVerdict.xml: No such file or directory
grep: GenericPropertiesVerdict.xml: No such file or directory

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-20"
export BK_EXAMINATION="GlobalProperties"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3954"
echo " Executing tool lola"
echo " Input is Angiogenesis-PT-20, examination is GlobalProperties"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r016-csrt-155225064900039"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-20.tgz
mv Angiogenesis-PT-20 execution
cd execution
if [ "GlobalProperties" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "GlobalProperties" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "GlobalProperties" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "GlobalProperties" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "GlobalProperties.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property GlobalProperties.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "GlobalProperties.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' GlobalProperties.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;