Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fko/mcc2019-input.r204-oct2-155274856800311.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fko/mcc2019-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
...............
=====================================================================
Generated by BenchKit 2-3954
Executing tool itstoolsm
Input is QuasiCertifProtocol-PT-32, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r204-oct2-155274856800311
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 2.5M
-rw-r--r-- 1 mcc users 33K Feb 12 10:40 CTLCardinality.txt
-rw-r--r-- 1 mcc users 126K Feb 12 10:40 CTLCardinality.xml
-rw-r--r-- 1 mcc users 8.8K Feb 8 12:43 CTLFireability.txt
-rw-r--r-- 1 mcc users 39K Feb 8 12:43 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.4K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 112 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 350 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 31K Feb 5 00:45 LTLCardinality.txt
-rw-r--r-- 1 mcc users 115K Feb 5 00:45 LTLCardinality.xml
-rw-r--r-- 1 mcc users 4.7K Feb 4 22:41 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Feb 4 22:41 LTLFireability.xml
-rw-r--r-- 1 mcc users 46K Feb 4 14:00 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 174K Feb 4 14:00 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.1K Feb 1 10:21 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 35K Feb 1 10:21 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 16K Feb 4 22:26 UpperBounds.txt
-rw-r--r-- 1 mcc users 42K Feb 4 22:26 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 3 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 1.8M Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-00
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-01
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-02
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-03
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-04
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-05
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-06
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-07
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-08
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-09
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-10
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-11
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-12
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-13
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-14
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1554181632783

Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl, --load-order, /home/mcc/execution/model.ord], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl --load-order /home/mcc/execution/model.ord
Successfully loaded order from file /home/mcc/execution/model.ord
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
sparsehash FATAL ERROR: failed to allocate 30 groups
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1554183694552

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Apr 02, 2019 5:07:14 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt]
Apr 02, 2019 5:07:14 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Apr 02, 2019 5:07:14 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 187 ms
Apr 02, 2019 5:07:14 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3806 places.
Apr 02, 2019 5:07:14 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 506 transitions.
Apr 02, 2019 5:07:15 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 366 ms
Apr 02, 2019 5:07:15 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 506 transitions.
Apr 02, 2019 5:07:15 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 3806 places.
Apr 02, 2019 5:07:15 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 506 transitions.
Apr 02, 2019 5:07:45 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 16 ms
Apr 02, 2019 5:07:45 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 10 ms
ITS-tools command line returned an error code 1
Apr 02, 2019 5:21:40 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 283 ms
Apr 02, 2019 5:21:40 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 12 ms
Apr 02, 2019 5:21:40 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 6 ms
ITS-tools command line returned an error code 134
Apr 02, 2019 5:31:32 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Apr 02, 2019 5:31:32 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 192 ms
Apr 02, 2019 5:31:32 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 210 ms
Apr 02, 2019 5:31:32 AM fr.lip6.move.gal.application.MccTranslator applyOrder
WARNING: Could not apply decomposition. Using flat GAL structure.
java.lang.NullPointerException
at fr.lip6.move.gal.application.MccTranslator.applyOrder(MccTranslator.java:128)
at fr.lip6.move.gal.application.MccTranslator.flattenSpec(MccTranslator.java:156)
at fr.lip6.move.gal.application.Application.runMultiITS(Application.java:427)
at fr.lip6.move.gal.application.Application.start(Application.java:237)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:40)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:137)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:107)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:400)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:595)
at org.eclipse.equinox.launcher.Main.run(Main.java:1501)
at org.eclipse.equinox.launcher.Main.main(Main.java:1474)
Apr 02, 2019 5:31:32 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 200 ms
Apr 02, 2019 5:31:32 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 6 ms
Apr 02, 2019 5:31:32 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 4 ms
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="QuasiCertifProtocol-PT-32"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsm"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3954"
echo " Executing tool itstoolsm"
echo " Input is QuasiCertifProtocol-PT-32, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r204-oct2-155274856800311"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/QuasiCertifProtocol-PT-32.tgz
mv QuasiCertifProtocol-PT-32 execution
cd execution
if [ "CTLFireability" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "CTLFireability" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;