Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/local/x2003239/mcc2019-input.r203-csrt-155344537800213.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2019-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..................
=====================================================================
Generated by BenchKit 2-3954
Executing tool itstoolsm
Input is FamilyReunion-PT-L00100M0010C005P005G002, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r203-csrt-155344537800213
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 33M
-rw-r--r-- 1 mcc users 4.8K Mar 24 07:04 CTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Mar 24 07:04 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.8K Mar 24 06:56 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K Mar 24 06:55 CTLFireability.xml
-rw-r--r-- 1 mcc users 2.9K Mar 24 06:51 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K Mar 24 06:51 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K Mar 24 06:48 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.6K Mar 24 06:48 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 Mar 24 00:18 NewModel
-rw-r--r-- 1 mcc users 4.3K Mar 24 06:39 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K Mar 24 06:39 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 131 Mar 24 06:28 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 369 Mar 24 06:28 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 4.7K Mar 24 06:30 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 21K Mar 24 06:30 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.0K Mar 24 06:46 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.1K Mar 24 06:46 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Mar 24 00:18 equiv_col
-rw-r--r-- 1 mcc users 24 Mar 24 00:18 instance
-rw-r--r-- 1 mcc users 6 Mar 24 00:18 iscolored
-rw-r--r-- 1 mcc users 32M Mar 24 00:18 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-00
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-01
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-02
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-03
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-04
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-05
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-06
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-07
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-08
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-09
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-10
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-11
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-12
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-13
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-14
FORMULA_NAME FamilyReunion-PT-L00100M0010C005P005G002-LTLCardinality-15

=== Now, execution of the tool begins

BK_START 1553841282887

Working with output stream class java.io.PrintStream
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock, --load-order, /home/mcc/execution/model.ord], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock --load-order /home/mcc/execution/model.ord
Read 16 LTL properties
Successfully loaded order from file /home/mcc/execution/model.ord
Checking formula 0 : !((X((X("(ml1_13_10>=2)"))U(G("(l5_33_5<=c6_76_1)")))))
Formula 0 simplified : !X(X"(ml1_13_10>=2)" U G"(l5_33_5<=c6_76_1)")
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution] killed by timeout after 400 SECONDS
Detected timeout of ITS tools.
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !((X((X("(ml1_13_10>=2)"))U(G("(l5_33_5<=c6_76_1)")))))
Formula 0 simplified : !X(X"(ml1_13_10>=2)" U G"(l5_33_5<=c6_76_1)")
Detected timeout of ITS tools.
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !((X((X("(ml1_13_10>=2)"))U(G("(l5_33_5<=c6_76_1)")))))
Formula 0 simplified : !X(X"(ml1_13_10>=2)" U G"(l5_33_5<=c6_76_1)")

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 29, 2019 6:34:45 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt]
Mar 29, 2019 6:34:45 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 29, 2019 6:34:46 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 1213 ms
Mar 29, 2019 6:34:46 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 40605 places.
Mar 29, 2019 6:34:49 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 36871 transitions.
Mar 29, 2019 6:34:53 AM fr.lip6.move.gal.instantiate.DomainAnalyzer computeVariableDomains
INFO: Found a total of 31 fixed domain variables (out of 40605 variables) in GAL type FamilyReunion_PT_L00100M0010C005P005G002
Mar 29, 2019 6:34:53 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: Found a total of 31 constant array cells/variables (out of 40605 variables) in type FamilyReunion_PT_L00100M0010C005P005G002
Mar 29, 2019 6:34:53 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: m0_3,m0_5,p0_1,p0_5,p0_3,c2_5,c2_0,c2_1,m0_6,c2_2,m0_1,c0_3,p0_0,m0_4,c0_1,c0_5,c0_2,r0_Y,p0_2,m0_7,c0_4,c0_0,p0_4,m0_0,m0_8,c2_4,m0_9,m0_2,c2_3,r0_N,m0_10,
Mar 29, 2019 6:34:53 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Removed 31 constant variables :m0_3=1, m0_5=1, p0_1=1, p0_5=1, p0_3=1, c2_5=1, c2_0=1, c2_1=1, m0_6=1, c2_2=1, m0_1=1, c0_3=1, p0_0=1, m0_4=1, c0_1=1, c0_5=1, c0_2=1, r0_Y=1, p0_2=1, m0_7=1, c0_4=1, c0_0=1, p0_4=1, m0_0=1, m0_8=1, c2_4=1, m0_9=1, m0_2=1, c2_3=1, r0_N=1, m0_10=1
Mar 29, 2019 6:34:53 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Simplified 3535 expressions due to constant valuations.
Mar 29, 2019 6:34:54 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 5465 ms
Mar 29, 2019 6:35:01 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 36871 transitions.
Mar 29, 2019 6:35:01 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Too many transitions (36871) to apply POR reductions. Disabling POR matrices.
Mar 29, 2019 6:35:11 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 13693 ms
Mar 29, 2019 6:35:17 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 36871 transitions.
Mar 29, 2019 6:35:18 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 40574 places.
Mar 29, 2019 6:35:18 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 36871 transitions.
Mar 29, 2019 6:35:19 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 21896ms conformant to PINS in folder :/home/mcc/execution
Mar 29, 2019 6:35:57 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 416 ms
Mar 29, 2019 6:35:57 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 3 ms
java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution] killed by timeout after 400 SECONDS
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:78)
at java.lang.Thread.run(Thread.java:748)
Mar 29, 2019 6:56:01 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 3160 ms
Mar 29, 2019 6:56:01 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 342 ms
Mar 29, 2019 6:56:01 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 1 ms
Mar 29, 2019 7:16:04 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 2876 ms
Mar 29, 2019 7:16:08 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 3649 ms
Mar 29, 2019 7:16:08 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 6 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="FamilyReunion-PT-L00100M0010C005P005G002"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="itstoolsm"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3954"
echo " Executing tool itstoolsm"
echo " Input is FamilyReunion-PT-L00100M0010C005P005G002, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r203-csrt-155344537800213"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/FamilyReunion-PT-L00100M0010C005P005G002.tgz
mv FamilyReunion-PT-L00100M0010C005P005G002 execution
cd execution
if [ "LTLCardinality" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "LTLCardinality" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;