Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2019-input.r198-smll-155272319400284.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2019-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
.......................
=====================================================================
Generated by BenchKit 2-3957
Executing tool itstoolsm
Input is PolyORBLF-PT-S02J06T08, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r198-smll-155272319400284
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 1.7M
-rw-r--r-- 1 mcc users 8.3K Feb 12 09:19 CTLCardinality.txt
-rw-r--r-- 1 mcc users 33K Feb 12 09:19 CTLCardinality.xml
-rw-r--r-- 1 mcc users 19K Feb 8 09:36 CTLFireability.txt
-rw-r--r-- 1 mcc users 68K Feb 8 09:36 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 109 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 347 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 6.8K Feb 5 00:34 LTLCardinality.txt
-rw-r--r-- 1 mcc users 23K Feb 5 00:34 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.5K Feb 4 22:38 LTLFireability.txt
-rw-r--r-- 1 mcc users 14K Feb 4 22:38 LTLFireability.xml
-rw-r--r-- 1 mcc users 8.4K Feb 4 12:45 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 29K Feb 4 12:45 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 13K Feb 1 08:10 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 44K Feb 1 08:10 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 3.3K Feb 4 22:23 UpperBounds.txt
-rw-r--r-- 1 mcc users 7.0K Feb 4 22:23 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 10 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 1.3M Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-00
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-01
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-02
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-03
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-04
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-05
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-06
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-07
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-08
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-09
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-10
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-11
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-12
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-13
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-14
FORMULA_NAME PolyORBLF-PT-S02J06T08-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1553839719483

Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl, --load-order, /home/mcc/execution/model.ord], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl --load-order /home/mcc/execution/model.ord
Successfully loaded order from file /home/mcc/execution/model.ord
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
sparsehash FATAL ERROR: failed to allocate 25 groups
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.

BK_STOP 1553842314848

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 29, 2019 6:08:42 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt]
Mar 29, 2019 6:08:42 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 29, 2019 6:08:42 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 262 ms
Mar 29, 2019 6:08:42 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 690 places.
Mar 29, 2019 6:08:43 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 1434 transitions.
Mar 29, 2019 6:08:43 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 406 ms
Mar 29, 2019 6:08:44 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 1434 transitions.
Mar 29, 2019 6:08:44 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 690 places.
Mar 29, 2019 6:08:44 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 1434 transitions.
Mar 29, 2019 6:09:14 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 41 ms
Mar 29, 2019 6:09:14 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 19 ms
ITS-tools command line returned an error code 1
Mar 29, 2019 6:25:47 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 281 ms
Mar 29, 2019 6:25:47 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 16 ms
Mar 29, 2019 6:25:47 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 7 ms
ITS-tools command line returned an error code 139
Mar 29, 2019 6:38:36 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Mar 29, 2019 6:38:37 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 455 ms
Mar 29, 2019 6:38:37 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 269 ms
Mar 29, 2019 6:38:37 AM fr.lip6.move.gal.application.MccTranslator applyOrder
WARNING: Could not apply decomposition. Using flat GAL structure.
java.lang.NullPointerException
at fr.lip6.move.gal.application.MccTranslator.applyOrder(MccTranslator.java:128)
at fr.lip6.move.gal.application.MccTranslator.flattenSpec(MccTranslator.java:156)
at fr.lip6.move.gal.application.Application.runMultiITS(Application.java:427)
at fr.lip6.move.gal.application.Application.start(Application.java:237)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:40)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:137)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:107)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:400)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:595)
at org.eclipse.equinox.launcher.Main.run(Main.java:1501)
at org.eclipse.equinox.launcher.Main.main(Main.java:1474)
Mar 29, 2019 6:38:37 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 269 ms
Mar 29, 2019 6:38:37 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 25 ms
Mar 29, 2019 6:38:38 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 9 ms
ITS-tools command line returned an error code 139

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBLF-PT-S02J06T08"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsm"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3957"
echo " Executing tool itstoolsm"
echo " Input is PolyORBLF-PT-S02J06T08, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r198-smll-155272319400284"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBLF-PT-S02J06T08.tgz
mv PolyORBLF-PT-S02J06T08 execution
cd execution
if [ "CTLFireability" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "CTLFireability" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;