Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/local/x2003239/mcc2019-input.r195-csrt-155246554400392.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2019-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.....................
=====================================================================
Generated by BenchKit 2-3954
Executing tool itstoolsm
Input is GPPP-PT-C0100N0000000010, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r195-csrt-155246554400392
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 196K
-rw-r--r-- 1 mcc users 4.0K Feb 11 01:32 CTLCardinality.txt
-rw-r--r-- 1 mcc users 23K Feb 11 01:32 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K Feb 7 00:13 CTLFireability.txt
-rw-r--r-- 1 mcc users 12K Feb 7 00:13 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.7K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 111 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 349 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.4K Feb 4 23:53 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K Feb 4 23:53 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Feb 4 22:35 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.3K Feb 4 22:35 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K Feb 3 08:45 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 21K Feb 3 08:45 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 3.6K Jan 31 01:40 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K Jan 31 01:40 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 4 22:20 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 4 22:20 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 17 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 1 Mar 10 17:31 large_marking
-rw-r--r-- 1 mcc users 21K Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-00
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-01
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-02
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-03
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-04
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-05
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-06
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-07
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-08
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-09
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-10
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-11
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-12
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-13
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-14
FORMULA_NAME GPPP-PT-C0100N0000000010-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1553730228364

Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl, --load-order, /home/mcc/execution/model.ord], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl --load-order /home/mcc/execution/model.ord
Successfully loaded order from file /home/mcc/execution/model.ord
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,1.41846e+10,1.51965,48404,2,31449,5,251624,6,0,161,231997,0


Converting to forward existential form...Done !
original formula: AX(!((AG(((ATP>=1)&&(Gluc>=1))) + ((!((Xu5P>=1)&&(R5P>=1)))&&(((E4P>=1)&&(Xu5P>=1))||((PEP>=1)&&(ADP>=1)))))))
=> equivalent forward existential formula: ([(EY(Init) * !(E(TRUE U !(((ATP>=1)&&(Gluc>=1))))))] = FALSE * [(EY(Init) * ((!((Xu5P>=1)&&(R5P>=1)))&&(((E4P>=1)&&(Xu5P>=1))||((PEP>=1)&&(ADP>=1)))))] = FALSE)
Reverse transition relation is NOT exact ! Due to transitions t8, t13, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :1/19/2/22
(forward)formula 0,1,8.0107,186048,1,0,49,926753,66,25,1751,680537,55
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-00 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: EF((((Ru5P>=1)&&(a2>=1))&&(_3PG>=1)))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * (((Ru5P>=1)&&(a2>=1))&&(_3PG>=1)))] != FALSE
(forward)formula 1,1,8.05147,186048,1,0,51,926798,67,26,1752,680579,56
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-01 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: EF((((PEP>=1)&&(ADP>=1)) * !(EX(((Pyr>=1)&&(NADH>=1))))))
=> equivalent forward existential formula: [((FwdU(Init,TRUE) * ((PEP>=1)&&(ADP>=1))) * !(EX(((Pyr>=1)&&(NADH>=1)))))] != FALSE
(forward)formula 2,0,8.48088,191856,1,0,56,987907,69,31,1762,798865,62
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-02 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AG((((ADP>=1)&&(_1_3_BPG>=1))||(!((GSH>=2)&&((PEP>=1)&&(ADP>=1))))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !((((ADP>=1)&&(_1_3_BPG>=1))||(!((GSH>=2)&&((PEP>=1)&&(ADP>=1)))))))] = FALSE
(forward)formula 3,0,8.94587,198456,1,0,59,1.00353e+06,71,33,1771,879372,63
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: (A(!((_3PG>=1)) U EF(((F6P>=1)&&(ATP>=1)))) * AG(!(EF(((Pyr>=1)&&(NADH>=1))))))
=> equivalent forward existential formula: (([((FwdU(Init,!(E(TRUE U ((F6P>=1)&&(ATP>=1))))) * !(!((_3PG>=1)))) * !(E(TRUE U ((F6P>=1)&&(ATP>=1)))))] = FALSE * [FwdG(Init,!(E(TRUE U ((F6P>=1)&&(ATP>=1)))))] = FALSE) * [(FwdU(FwdU(Init,TRUE),TRUE) * ((Pyr>=1)&&(NADH>=1)))] = FALSE)
(forward)formula 4,0,9.11489,203208,1,0,60,1.00354e+06,72,34,1798,924309,65
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AG(EF(!(((Xu5P>=1)&&(R5P>=1)))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !(((Xu5P>=1)&&(R5P>=1))))))] = FALSE
(forward)formula 5,1,9.15939,204264,1,0,61,1.01031e+06,74,34,1798,929333,68
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-05 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: A(!((((GSSG>=1)&&(NADPH>=1))&&((((GAP>=1)&&(NADplus>=1))&&(Pi>=1))&&(c2>=1)))) U ((F6P>=1)&&(ATP>=1)))
=> equivalent forward existential formula: [((Init * !(EG(!(((F6P>=1)&&(ATP>=1)))))) * !(E(!(((F6P>=1)&&(ATP>=1))) U (!(!((((GSSG>=1)&&(NADPH>=1))&&((((GAP>=1)&&(NADplus>=1))&&(Pi>=1))&&(c2>=1))))) * !(((F6P>=1)&&(ATP>=1)))))))] != FALSE
(forward)formula 6,0,438.137,2735064,1,0,1833,1.65625e+07,11,800,1288,1.79519e+07,2190
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AG(EF(EG((FBP>=1))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U EG((FBP>=1)))))] = FALSE
(forward)formula 7,0,517.366,3008752,1,0,3089,1.80568e+07,16,1235,1219,1.90756e+07,546
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EG(A((_3PG>=1) U !(((F6P>=1)&&(ATP>=1)))))
=> equivalent forward existential formula: [FwdG(Init,!((E(!(!(((F6P>=1)&&(ATP>=1)))) U (!((_3PG>=1)) * !(!(((F6P>=1)&&(ATP>=1)))))) + EG(!(!(((F6P>=1)&&(ATP>=1))))))))] != FALSE
(forward)formula 8,1,565.037,3008752,1,0,3089,1.80568e+07,30,1446,1289,1.90756e+07,3183
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-08 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: EF(AG((FBP>=1)))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !((FBP>=1)))))] != FALSE
(forward)formula 9,0,567.216,3008752,1,0,3089,1.80568e+07,31,1448,1366,1.90756e+07,3191
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AG(AF((DHAP>=1)))
=> equivalent forward existential formula: [FwdG(FwdU(Init,TRUE),!((DHAP>=1)))] = FALSE
Hit Full ! (commute/partial/dont) 19/0/3
(forward)formula 10,0,718.5,3316048,1,0,3089,1.95352e+07,9,1449,1053,2.09125e+07,1
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-10 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: FALSE
=> equivalent forward existential formula: [(Init * FALSE)] != FALSE
(forward)formula 11,0,718.5,3316048,1,0,3089,1.95352e+07,9,1449,1053,2.09125e+07,1
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-11 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: FALSE
=> equivalent forward existential formula: [(Init * FALSE)] != FALSE
(forward)formula 12,0,718.5,3316048,1,0,3089,1.95352e+07,9,1449,1053,2.09125e+07,1
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: FALSE
=> equivalent forward existential formula: [(Init * FALSE)] != FALSE
(forward)formula 13,0,718.5,3316048,1,0,3089,1.95352e+07,9,1449,1053,2.09125e+07,1
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-13 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: FALSE
=> equivalent forward existential formula: [(Init * FALSE)] != FALSE
(forward)formula 14,0,718.5,3316048,1,0,3089,1.95352e+07,9,1449,1053,2.09125e+07,1
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-14 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AX((((GSSG>=1)&&(NADPH>=1))||((_2PG>=1)||((PEP>=1)&&(ADP>=1)))))
=> equivalent forward existential formula: [(EY(Init) * !((((GSSG>=1)&&(NADPH>=1))||((_2PG>=1)||((PEP>=1)&&(ADP>=1))))))] = FALSE
(forward)formula 15,0,718.845,3316048,1,0,3089,1.95352e+07,11,1449,1077,2.09125e+07,3
FORMULA GPPP-PT-C0100N0000000010-CTLFireability-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************


BK_STOP 1553730950751

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt]
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 32 ms
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 33 places.
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 22 transitions.
Mar 27, 2019 11:43:50 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 6 ms
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.instantiate.CTLSimplifier simplifyTemporal
INFO: Initial state reduction rules for CTL removed 4 formulas.
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 25 ms
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 22 transitions.
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 33 places.
Mar 27, 2019 11:43:50 PM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 22 transitions.
Mar 27, 2019 11:43:50 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 1 ms
Mar 27, 2019 11:43:50 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 2 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000000010"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsm"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3954"
echo " Executing tool itstoolsm"
echo " Input is GPPP-PT-C0100N0000000010, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r195-csrt-155246554400392"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000000010.tgz
mv GPPP-PT-C0100N0000000010 execution
cd execution
if [ "CTLFireability" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "CTLFireability" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;