Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/local/x2003239/mcc2019-input.r189-csrt-155225079800009.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2019-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
....................................
=====================================================================
Generated by BenchKit 2-3954
Executing tool itstoolsm
Input is Angiogenesis-PT-01, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r189-csrt-155225079800009
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 200K
-rw-r--r-- 1 mcc users 3.7K Feb 9 06:49 CTLCardinality.txt
-rw-r--r-- 1 mcc users 18K Feb 9 06:49 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K Feb 5 03:33 CTLFireability.txt
-rw-r--r-- 1 mcc users 16K Feb 5 03:33 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 105 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 343 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.4K Feb 4 22:52 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.9K Feb 4 22:52 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K Feb 4 22:32 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.8K Feb 4 22:32 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.7K Feb 2 00:14 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 17K Feb 2 00:14 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.7K Jan 29 11:28 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K Jan 29 11:28 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 4 22:18 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 4 22:18 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 3 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 33K Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-00
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-01
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-02
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-03
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-04
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-05
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-06
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-07
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-08
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-09
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-10
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-11
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-12
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-13
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-14
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1553581363911

Working with output stream class java.io.PrintStream
FORMULA Angiogenesis-PT-01-ReachabilityFireability-14 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-12 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-11 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-10 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-08 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-07 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-03 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-02 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-01 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-00 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityFireability.pnml.gal, -t, CGAL, -reachable-file, ReachabilityFireability.prop, --nowitness, --load-order, /home/mcc/execution/model.ord], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityFireability.pnml.gal -t CGAL -reachable-file ReachabilityFireability.prop --nowitness --load-order /home/mcc/execution/model.ord
Successfully loaded order from file /home/mcc/execution/model.ord
Loading property file ReachabilityFireability.prop.
Read [invariant] property : Angiogenesis-PT-01-ReachabilityFireability-04 with value :(((!(KdStarGStarP3kStarP2>=1))&&((DAGE>=1)&&(((KdStarGStarP3>=1)&&(P3k>=1))&&((KdStarGStarPgStar>=1)&&(Pip2>=1)))))||(!(KdStarGStarP3>=1)))
Read [reachable] property : Angiogenesis-PT-01-ReachabilityFireability-05 with value :((KdStarGStarP3kP3>=1)&&((((DAG>=1)&&(Enz>=1))||((KdStarGStarPg>=1)||(GStarPgP3>=1)))&&((!((KdStarGStarP3kStarP3>=1)&&(Pip2>=1)))&&((KdStarGStarP3k>=1)&&((KdStarPgStar>=1)&&(Pip2>=1))))))
Read [reachable] property : Angiogenesis-PT-01-ReachabilityFireability-06 with value :((((((Gab1>=1)&&(KdStar>=1))&&(AktP3>=1))||((KdStarGP3>=1)&&(KdStarGStarPgStarP3P2>=1)))&&(KdStarGStarP3kP3>=1))&&((KdStarGStarPg>=1)&&((((KdStarGStarPgStar>=1)&&(Pip2>=1))||(KdStarGStarP3kP3>=1))&&(KdStarGStarPgP3>=1))))
Read [reachable] property : Angiogenesis-PT-01-ReachabilityFireability-09 with value :(KdStarPg>=1)
Read [reachable] property : Angiogenesis-PT-01-ReachabilityFireability-13 with value :((DAG>=1)&&(Enz>=1))
Read [reachable] property : Angiogenesis-PT-01-ReachabilityFireability-15 with value :(((((KdStarG>=1)&&(KdStarGStarPgStarP3P2>=1))||((KdStarG>=1)&&((KdStarGStarP3kStarP3>=1)&&(Pip2>=1))))||((!((KdStarGStarP3>=1)&&(Pg>=1)))&&(((KdStarGStarPgStarP3>=1)&&(Pip2>=1))||((KdStar>=1)&&(Pg>=1)))))&&((!((KdStarGStarP3kStarP3P2>=1)||(AktP3>=1)))&&(KdStarPg>=1)))
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri,110,0.028311,4092,2,216,5,1210,6,0,220,1100,0
Total reachable state count : 110

Verifying 6 reachability properties.
Invariant property Angiogenesis-PT-01-ReachabilityFireability-04 does not hold.
FORMULA Angiogenesis-PT-01-ReachabilityFireability-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
Angiogenesis-PT-01-ReachabilityFireability-04,2,0.029199,4124,2,41,6,1210,7,0,231,1100,0
Reachability property Angiogenesis-PT-01-ReachabilityFireability-05 does not hold.
FORMULA Angiogenesis-PT-01-ReachabilityFireability-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : Angiogenesis-PT-01-ReachabilityFireability-05

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
Angiogenesis-PT-01-ReachabilityFireability-05,0,0.031277,4220,1,0,6,1210,8,0,247,1100,0
Reachability property Angiogenesis-PT-01-ReachabilityFireability-06 does not hold.
FORMULA Angiogenesis-PT-01-ReachabilityFireability-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : Angiogenesis-PT-01-ReachabilityFireability-06

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
Angiogenesis-PT-01-ReachabilityFireability-06,0,0.03413,4452,1,0,6,1210,9,0,256,1100,0
Reachability property Angiogenesis-PT-01-ReachabilityFireability-09 is true.
FORMULA Angiogenesis-PT-01-ReachabilityFireability-09 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
Angiogenesis-PT-01-ReachabilityFireability-09,5,0.034665,4452,2,67,7,1210,10,0,257,1100,0
Reachability property Angiogenesis-PT-01-ReachabilityFireability-13 is true.
FORMULA Angiogenesis-PT-01-ReachabilityFireability-13 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
Angiogenesis-PT-01-ReachabilityFireability-13,14,0.035323,4452,2,99,8,1210,11,0,257,1100,0
Reachability property Angiogenesis-PT-01-ReachabilityFireability-15 does not hold.
FORMULA Angiogenesis-PT-01-ReachabilityFireability-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : Angiogenesis-PT-01-ReachabilityFireability-15

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
Angiogenesis-PT-01-ReachabilityFireability-15,0,0.038894,4452,1,0,8,1210,12,0,280,1100,0
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread was asked to interrupt. Dying gracefully.

BK_STOP 1553581367147

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt]
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 45 ms
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 39 places.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 64 transitions.
Mar 26, 2019 6:22:46 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 11 ms
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityFireability-00 is trivially false : it is not verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityFireability-01 is trivially false : it is not verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityFireability-02 is trivially false : it is not verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property Angiogenesis-PT-01-ReachabilityFireability-03 is trivially true : it is verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property Angiogenesis-PT-01-ReachabilityFireability-07 is trivially true : it is verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityFireability-08 is trivially false : it is not verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityFireability-10 is trivially false : it is not verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityFireability-11 is trivially false : it is not verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property Angiogenesis-PT-01-ReachabilityFireability-12 is trivially true : it is verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityFireability-14 is trivially false : it is not verified in initial state.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 51 ms
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 16 ms
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 42 ms
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 64 transitions.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 64 transitions.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 39 places.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 64 transitions.
Mar 26, 2019 6:22:46 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 64 transitions.
Mar 26, 2019 6:22:46 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityFireability.pnml.gal : 1 ms
Mar 26, 2019 6:22:46 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/ReachabilityFireability.prop : 1 ms
Mar 26, 2019 6:22:46 AM org.smtlib.impl.Script execute
WARNING: Script execution failed on command (define-fun _enabledsrc__25 ((src (Array Int Int))) Bool (and (>= (select src 11) 1) (>= (select src 34) 1))) with error (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
Skipping mayMatrices nes/nds Error when declaring system variables to SMT solver.(error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
java.lang.RuntimeException: Error when declaring system variables to SMT solver.(error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
at fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver.init(NextBMCSolver.java:93)
at fr.lip6.move.gal.gal2smt.bmc.KInductionSolver.init(KInductionSolver.java:59)
at fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver.init(NecessaryEnablingsolver.java:71)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printLabels(Gal2PinsTransformerNext.java:471)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printDependencyMatrix(Gal2PinsTransformerNext.java:209)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.buildBodyFile(Gal2PinsTransformerNext.java:85)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.transform(Gal2PinsTransformerNext.java:830)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:71)
at java.lang.Thread.run(Thread.java:748)
Mar 26, 2019 6:22:46 AM org.smtlib.impl.Script execute
WARNING: Script execution failed on command (define-fun tr23 ((step Int)) Bool (trsrc23 (select s step) (select s (+ step 1)))) with error (error "Error writing to Z3 solver: java.io.IOException: Stream closed")
java.lang.RuntimeException: Error when declaring system variables to SMT solver.(error "Error writing to Z3 solver: java.io.IOException: Stream closed")
at fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver.init(NextBMCSolver.java:93)
at fr.lip6.move.gal.gal2smt.smt.ISMTSolver.init(ISMTSolver.java:17)
at fr.lip6.move.gal.gal2smt.Gal2SMTFrontEnd.checkProperties(Gal2SMTFrontEnd.java:94)
at fr.lip6.move.gal.application.SMTRunner$2.run(SMTRunner.java:110)
at java.lang.Thread.run(Thread.java:748)
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 199ms conformant to PINS in folder :/home/mcc/execution

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-01"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="itstoolsm"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3954"
echo " Executing tool itstoolsm"
echo " Input is Angiogenesis-PT-01, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r189-csrt-155225079800009"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-01.tgz
mv Angiogenesis-PT-01 execution
cd execution
if [ "ReachabilityFireability" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;