About the Execution of ITS-Tools.M for Angiogenesis-PT-01
Execution Summary | |||||
Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
317.540 | 3317.00 | 5854.00 | 130.80 | FFFTFFTFTFTTFFTT | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/local/x2003239/mcc2019-input.r189-csrt-155225079800006.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2019-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.................
=====================================================================
Generated by BenchKit 2-3954
Executing tool itstoolsm
Input is Angiogenesis-PT-01, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r189-csrt-155225079800006
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 200K
-rw-r--r-- 1 mcc users 3.7K Feb 9 06:49 CTLCardinality.txt
-rw-r--r-- 1 mcc users 18K Feb 9 06:49 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K Feb 5 03:33 CTLFireability.txt
-rw-r--r-- 1 mcc users 16K Feb 5 03:33 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 105 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 343 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.4K Feb 4 22:52 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.9K Feb 4 22:52 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K Feb 4 22:32 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.8K Feb 4 22:32 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.7K Feb 2 00:14 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 17K Feb 2 00:14 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.7K Jan 29 11:28 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K Jan 29 11:28 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 4 22:18 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 4 22:18 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 3 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 33K Mar 10 17:31 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-00
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-01
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-02
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-03
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-04
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-05
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-06
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-07
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-08
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-09
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-10
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-11
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-12
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-13
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-14
FORMULA_NAME Angiogenesis-PT-01-LTLCardinality-15
=== Now, execution of the tool begins
BK_START 1553581364823
Working with output stream class java.io.PrintStream
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/pinvar, /home/mcc/execution/gspn], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : CommandLine [args=[/home/mcc/BenchKit//greatspn//bin/RGMEDD2, /home/mcc/execution/gspn, -META, -varord-only], workingDir=/home/mcc/execution]
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock, --load-order, /home/mcc/execution/model.ord], workingDir=/home/mcc/execution]
its-ltl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903251645/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock --load-order /home/mcc/execution/model.ord
Read 16 LTL properties
Successfully loaded order from file /home/mcc/execution/model.ord
Checking formula 0 : !((F(F(G("(PtP3>=1)")))))
Formula 0 simplified : !FG"(PtP3>=1)"
Reverse transition relation is NOT exact ! Due to transitions t12, t51, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :14/48/2/64
Computing Next relation with stutter on 4 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
7 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.102402,18832,1,0,104,6553,144,99,1351,8872,278
an accepting run exists (use option '-e' to print it)
Formula 0 is FALSE accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 1 : !((F("(KdStarGStarPgStar>=2)")))
Formula 1 simplified : !F"(KdStarGStarPgStar>=2)"
Computing Next relation with stutter on 4 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
1 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.108641,18832,1,0,109,6840,153,124,1353,9987,362
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-01 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 2 : !(((G("(Gab1<=GStarP3kP3)"))U(G("(KdStarGStar>=2)"))))
Formula 2 simplified : !(G"(Gab1<=GStarP3kP3)" U G"(KdStarGStar>=2)")
Computing Next relation with stutter on 4 deadlock states
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.115287,19908,1,0,109,6905,177,124,1400,10434,379
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-02 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 3 : !((X("(KdStarPgStar<=Akt)")))
Formula 3 simplified : !X"(KdStarPgStar<=Akt)"
Computing Next relation with stutter on 4 deadlock states
2 unique states visited
0 strongly connected components in search stack
1 transitions explored
2 items max in DFS search stack
1 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.116389,20172,1,0,109,6905,180,124,1403,10436,381
no accepting run found
Formula 3 is TRUE no accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-03 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 4 : !((F(G("(Gab1>=3)"))))
Formula 4 simplified : !FG"(Gab1>=3)"
Computing Next relation with stutter on 4 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.118957,20172,1,0,109,6905,193,124,1405,10438,468
an accepting run exists (use option '-e' to print it)
Formula 4 is FALSE accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 5 : !((G(F("(KdStarPgStar>=1)"))))
Formula 5 simplified : !GF"(KdStarPgStar>=1)"
Computing Next relation with stutter on 4 deadlock states
3 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.120647,20172,1,0,112,6988,202,127,1406,10575,484
an accepting run exists (use option '-e' to print it)
Formula 5 is FALSE accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 6 : !((F((F("(DAGE<=KdStarPgStarP2)"))U("(DAGE<=KdStarPgStar)"))))
Formula 6 simplified : !F(F"(DAGE<=KdStarPgStarP2)" U "(DAGE<=KdStarPgStar)")
Computing Next relation with stutter on 4 deadlock states
1 unique states visited
0 strongly connected components in search stack
0 transitions explored
1 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.12112,20172,1,0,112,6988,211,127,1409,10577,488
no accepting run found
Formula 6 is TRUE no accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-06 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 7 : !((G(F(F(F("(Pip3>=1)"))))))
Formula 7 simplified : !GF"(Pip3>=1)"
Computing Next relation with stutter on 4 deadlock states
3 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.122188,20172,1,0,113,7034,220,128,1410,10642,497
an accepting run exists (use option '-e' to print it)
Formula 7 is FALSE accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 8 : !((F(F("(GStarP3<=Gab1)"))))
Formula 8 simplified : !F"(GStarP3<=Gab1)"
Computing Next relation with stutter on 4 deadlock states
1 unique states visited
0 strongly connected components in search stack
0 transitions explored
1 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.122619,20172,1,0,113,7034,229,128,1413,10643,501
no accepting run found
Formula 8 is TRUE no accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-08 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 9 : !((F(G(F(F("(PtP2>=1)"))))))
Formula 9 simplified : !FGF"(PtP2>=1)"
Computing Next relation with stutter on 4 deadlock states
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
3 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.123601,20412,1,0,114,7085,238,129,1414,10699,510
an accepting run exists (use option '-e' to print it)
Formula 9 is FALSE accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 10 : !(((X(F("(Gab1>=2)")))U(("(AktP3>=3)")U("(AktP3<=KdStarGStarPgStarP3P2)"))))
Formula 10 simplified : !(XF"(Gab1>=2)" U ("(AktP3>=3)" U "(AktP3<=KdStarGStarPgStarP3P2)"))
Computing Next relation with stutter on 4 deadlock states
1 unique states visited
0 strongly connected components in search stack
0 transitions explored
1 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.124462,20412,1,0,114,7085,246,129,1422,10700,514
no accepting run found
Formula 10 is TRUE no accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-10 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 11 : !((F("(GStarP3kP3<=KdStarPg)")))
Formula 11 simplified : !F"(GStarP3kP3<=KdStarPg)"
Computing Next relation with stutter on 4 deadlock states
1 unique states visited
0 strongly connected components in search stack
0 transitions explored
1 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.124834,20412,1,0,114,7085,255,129,1426,10701,518
no accepting run found
Formula 11 is TRUE no accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-11 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 12 : !((G("(PtP3P2>=1)")))
Formula 12 simplified : !G"(PtP3P2>=1)"
Computing Next relation with stutter on 4 deadlock states
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.125277,20412,1,0,114,7085,261,129,1428,10702,523
an accepting run exists (use option '-e' to print it)
Formula 12 is FALSE accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 13 : !((F(F("(AktStar>=1)"))))
Formula 13 simplified : !F"(AktStar>=1)"
Computing Next relation with stutter on 4 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
1 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.128565,20412,1,0,123,7394,270,140,1430,11324,569
an accepting run exists (use option '-e' to print it)
Formula 13 is FALSE accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-13 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 14 : !((F("(GStarP3kP3<=KdStarGStar)")))
Formula 14 simplified : !F"(GStarP3kP3<=KdStarGStar)"
Computing Next relation with stutter on 4 deadlock states
1 unique states visited
0 strongly connected components in search stack
0 transitions explored
1 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.129035,20412,1,0,123,7394,279,140,1433,11324,573
no accepting run found
Formula 14 is TRUE no accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-14 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 15 : !((X((X("(KdStarGStarPgStarP3>=1)"))U(F("(GStarP3<=DAGE)")))))
Formula 15 simplified : !X(X"(KdStarGStarPgStarP3>=1)" U F"(GStarP3<=DAGE)")
Computing Next relation with stutter on 4 deadlock states
2 unique states visited
0 strongly connected components in search stack
1 transitions explored
2 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,0.129724,20616,1,0,123,7394,288,140,1437,11326,577
no accepting run found
Formula 15 is TRUE no accepting run found.
FORMULA Angiogenesis-PT-01-LTLCardinality-15 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
// Phase 1: matrix 64 rows 39 cols
invariant :GStarP3kP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + P3k = 1
invariant :Pten + PtP2 + PtP3 + PtP3P2 = 1
invariant :Akt + AktP3 + AktStar = 1
invariant :DAGE + Enz = 1
invariant :Gab1 + GP3 + GStarP3 + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + -1'KdStarPg + -1'KdStarPgStar + -1'KdStarPgStarP2 + -1'P3k + -1'Pg = -1
invariant :GStarPgP3 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 + Pg = 1
invariant :KdStar + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 = 1
invariant :AktP3 + DAG + -1'Enz + -1'Gab1 + -1'KdStarG + -1'KdStarGStar + -1'KdStarGStarP3k + -1'KdStarGStarP3kStar + KdStarGStarP3kStarP3P2 + -1'KdStarGStarPg + -1'KdStarGStarPgStar + KdStarGStarPgStarP3P2 + KdStarPgStarP2 + Pip2 + Pip3 + PtP2 + PtP3 + 2'PtP3P2 = -1
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread was asked to interrupt. Dying gracefully.
BK_STOP 1553581368140
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -greatspnpath /home/mcc/BenchKit//greatspn/ -order META -manyOrder -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -greatspnpath, /home/mcc/BenchKit//greatspn/, -order, META, -manyOrder, -smt]
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 43 ms
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 39 places.
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 64 transitions.
Mar 26, 2019 6:22:47 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 16 ms
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 73 ms
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 54 ms
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 64 transitions.
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 39 places.
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.application.StructuralToGreatSPN handlePage
INFO: Transformed 64 transitions.
Mar 26, 2019 6:22:47 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 4 ms
Mar 26, 2019 6:22:47 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 1 ms
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 64 transitions.
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 8 place invariants in 28 ms
Skipping mayMatrices nes/nds SMT solver raised an error :(error "Error writing to Z3 solver: java.io.IOException: Stream closed")
java.lang.RuntimeException: SMT solver raised an error :(error "Error writing to Z3 solver: java.io.IOException: Stream closed")
at fr.lip6.move.gal.gal2smt.bmc.KInductionSolver.computeAndDeclareInvariants(KInductionSolver.java:293)
at fr.lip6.move.gal.gal2smt.bmc.KInductionSolver.init(KInductionSolver.java:71)
at fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver.init(NecessaryEnablingsolver.java:71)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printLabels(Gal2PinsTransformerNext.java:471)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printDependencyMatrix(Gal2PinsTransformerNext.java:209)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.buildBodyFile(Gal2PinsTransformerNext.java:85)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.transform(Gal2PinsTransformerNext.java:830)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:71)
at java.lang.Thread.run(Thread.java:748)
Mar 26, 2019 6:22:47 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 213ms conformant to PINS in folder :/home/mcc/execution
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-01"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="itstoolsm"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3954"
echo " Executing tool itstoolsm"
echo " Input is Angiogenesis-PT-01, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r189-csrt-155225079800006"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-01.tgz
mv Angiogenesis-PT-01 execution
cd execution
if [ "LTLCardinality" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "LTLCardinality" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;