Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2019-input.r096-smll-155246587500347.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2019-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
...................
=====================================================================
Generated by BenchKit 2-3957
Executing tool itstools
Input is MAPKbis-PT-5310, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r096-smll-155246587500347
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 364K
-rw-r--r-- 1 mcc users 4.4K Feb 11 22:53 CTLCardinality.txt
-rw-r--r-- 1 mcc users 22K Feb 11 22:53 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.7K Feb 7 23:45 CTLFireability.txt
-rw-r--r-- 1 mcc users 22K Feb 7 23:45 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 102 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 340 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.8K Feb 5 00:14 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K Feb 5 00:14 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.5K Feb 4 22:36 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K Feb 4 22:36 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.5K Feb 4 06:27 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 21K Feb 4 06:27 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 5.8K Feb 1 00:01 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 1 00:01 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Feb 4 22:21 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 4 22:21 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 5 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 0 Jan 29 09:34 model-fix.log
-rw-r--r-- 1 mcc users 166K Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-00
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-01
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-02
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-03
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-04
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-05
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-06
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-07
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-08
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-09
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-10
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-11
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-12
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-13
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-14
FORMULA_NAME MAPKbis-PT-5310-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1552885904609

Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903111103/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903111103/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,3.84641e+12,0.627652,21740,2,323,5,97038,6,0,554,87942,0


Converting to forward existential form...Done !
original formula: E(((((FGFR3_equals_1>=1)&&(PLCG_equals_0>=1))||(((DUSP1_equals_0>=1)&&(JNK_equals_0>=1))&&(TAK1_equals_1>=1))) + AX(((TAK1_equals_0>=1)&&(TGFBR_equals_1>=1)))) U (((((Proliferation_equals_1>=1)&&(p21_equals_1>=1))&&((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1)))&&((FGFR3_equals_1>=1)&&(GRB2_equals_1>=1))) + FALSE))
=> equivalent forward existential formula: [(FwdU(Init,((((FGFR3_equals_1>=1)&&(PLCG_equals_0>=1))||(((DUSP1_equals_0>=1)&&(JNK_equals_0>=1))&&(TAK1_equals_1>=1))) + !(EX(!(((TAK1_equals_0>=1)&&(TGFBR_equals_1>=1))))))) * (((((Proliferation_equals_1>=1)&&(p21_equals_1>=1))&&((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1)))&&((FGFR3_equals_1>=1)&&(GRB2_equals_1>=1))) + FALSE))] != FALSE
(forward)formula 0,0,0.63511,22172,1,0,5,97038,8,0,562,87942,0
FORMULA MAPKbis-PT-5310-CTLFireability-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EF(((SMAD_equals_1>=1)&&(TGFBR_equals_0>=1)))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * ((SMAD_equals_1>=1)&&(TGFBR_equals_0>=1)))] != FALSE
(forward)formula 1,0,0.635507,22172,1,0,5,97038,9,0,564,87942,0
FORMULA MAPKbis-PT-5310-CTLFireability-01 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EF(((EG(((EGFR_equals_1>=1)&&(PKC_equals_1>=1))) + (((SMAD_equals_0>=1)&&(TGFBR_equals_1>=1))||(FGFR3_equals_1>=1))) * (((PTEN_equals_0>=1)&&(p53_equals_1>=1))||((!((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))||(((Proliferation_equals_1>=1)&&(p21_equals_1>=1))||((((AKT_0>=1)&&(ERK_equals_0>=1))&&(RAF_equals_0>=1))&&(RAS_equals_1>=1)))))))
=> equivalent forward existential formula: ([FwdG((FwdU(Init,TRUE) * (((PTEN_equals_0>=1)&&(p53_equals_1>=1))||((!((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))||(((Proliferation_equals_1>=1)&&(p21_equals_1>=1))||((((AKT_0>=1)&&(ERK_equals_0>=1))&&(RAF_equals_0>=1))&&(RAS_equals_1>=1)))))),((EGFR_equals_1>=1)&&(PKC_equals_1>=1)))] != FALSE + [((FwdU(Init,TRUE) * (((PTEN_equals_0>=1)&&(p53_equals_1>=1))||((!((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))||(((Proliferation_equals_1>=1)&&(p21_equals_1>=1))||((((AKT_0>=1)&&(ERK_equals_0>=1))&&(RAF_equals_0>=1))&&(RAS_equals_1>=1)))))) * (((SMAD_equals_0>=1)&&(TGFBR_equals_1>=1))||(FGFR3_equals_1>=1)))] != FALSE)
Hit Full ! (commute/partial/dont) 159/8/9
(forward)formula 2,1,301.078,2616868,1,0,7,1.11101e+07,5,1,1038,2.03937e+07,1
FORMULA MAPKbis-PT-5310-CTLFireability-02 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: AX(AG(((!(((ATM_equals_0>=1)&&(p38_equals_0>=1))&&(p53_equals_1>=1)))||((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1))||(((AP1_equals_0>=1)&&(ATF2_equals_1>=1))&&(JUN_equals_1>=1))))))
=> equivalent forward existential formula: [(FwdU(EY(Init),TRUE) * !(((!(((ATM_equals_0>=1)&&(p38_equals_0>=1))&&(p53_equals_1>=1)))||((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1))||(((AP1_equals_0>=1)&&(ATF2_equals_1>=1))&&(JUN_equals_1>=1))))))] = FALSE
(forward)formula 3,0,301.712,2632972,1,0,11,1.12075e+07,11,2,1218,2.04825e+07,5
FORMULA MAPKbis-PT-5310-CTLFireability-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EF(((AG(((GAB1_equals_1>=1)&&(PI3K_equals_0>=1))) * ((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_1>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1))) + (((ERK_equals_1>=1)&&(RSK_equals_0>=1)) * EX(((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_1>=1))&&(TAOK_equals_1>=1))))))
=> equivalent forward existential formula: ([((FwdU(Init,TRUE) * ((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_1>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1))) * !(E(TRUE U !(((GAB1_equals_1>=1)&&(PI3K_equals_0>=1))))))] != FALSE + [(EY((FwdU(Init,TRUE) * ((ERK_equals_1>=1)&&(RSK_equals_0>=1)))) * ((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_1>=1))&&(TAOK_equals_1>=1)))] != FALSE)
Reverse transition relation is NOT exact ! Due to transitions EGFR_equals_1_to_EGFR_equals_0_when_GRB2_equals_1, EGFR_equals_1_to_EGFR_equals_0_when_PKC_equals_1, ERK_equals_0_to_ERK_equals_1_when_MEK1_2_equals_1, GADD45_equals_0_to_GADD45_equals_1_when_p53_equals_1, MAP3K1_3_equals_1_to_MAP3K1_3_equals_0_when_RAS_equals_0, MEK1_2_equals_1_to_MEK1_2_equals_0_when_AP1_equals_1, MEK1_2_equals_1_to_MEK1_2_equals_0_when_PPP2CA_equals_1, MTK1_equals_1_to_MTK1_equals_0_when_GADD45_equals_0, PKC_equals_1_to_PKC_equals_0_when_PLCG_equals_0, PLCG_equals_0_to_PLCG_equals_1_when_EGFR_equals_1, PPP2CA_equals_1_to_PPP2CA_equals_0_when_p38_equals_0, RAS_equals_0_to_RAS_equals_1_when_PLCG_equals_1, RAS_equals_0_to_RAS_equals_1_when_SOS_equals_1, RSK_equals_1_to_RSK_equals_0_when_ERK_equals_0, SOS_equals_1_to_SOS_equals_0_when_GRB2_equals_0, SOS_equals_1_to_SOS_equals_0_when_RSK_equals_1, p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_MAP3K1_3_equals_1, p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_MTK1_equals_1, p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1, p53_equals_1_to_p53_equals_0_when_ATM_equals_0_and_MDM2_equals_1, p53_equals_1_to_p53_equals_0_when_ATM_equals_0_and_p38_equals_0, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :36/111/21/168
(forward)formula 4,0,301.967,2639576,1,0,284,1.12521e+07,327,134,3874,2.05184e+07,315
FORMULA MAPKbis-PT-5310-CTLFireability-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EF(AG((((PKC_equals_0>=1)&&(RAF_equals_1>=1))&&(RAS_equals_0>=1))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !((((PKC_equals_0>=1)&&(RAF_equals_1>=1))&&(RAS_equals_0>=1))))))] != FALSE
(forward)formula 5,0,301.972,2639840,1,0,285,1.12527e+07,329,134,3879,2.05188e+07,318
FORMULA MAPKbis-PT-5310-CTLFireability-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AG(!(AG(!(((Growth_Arrest_equals_0>=1)&&(p21_equals_1>=1))))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !(!(((Growth_Arrest_equals_0>=1)&&(p21_equals_1>=1)))))))] = FALSE
(forward)formula 6,1,302.325,2649080,1,0,301,1.13081e+07,330,145,3879,2.05782e+07,349
FORMULA MAPKbis-PT-5310-CTLFireability-06 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: EF((!(EF(((AKT_equals_1>=1)&&(p21_equals_1>=1)))) * (((((((((DUSP1_equals_0>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1))&&(((AKT_equals_1>=1)&&(BCL2_equals_0>=1))&&(CREB_equals_1>=1)))||(((GRB2_equals_0>=1)&&(TGFBR_equals_1>=1))&&((FOS_equals_1>=1)&&(RSK_equals_0>=1)))) * EF(((ERK_equals_0>=1)&&(FOS_equals_1>=1))))))
=> equivalent forward existential formula: [(FwdU(((FwdU(Init,TRUE) * !(E(TRUE U ((AKT_equals_1>=1)&&(p21_equals_1>=1))))) * ((((((((DUSP1_equals_0>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1))&&(((AKT_equals_1>=1)&&(BCL2_equals_0>=1))&&(CREB_equals_1>=1)))||(((GRB2_equals_0>=1)&&(TGFBR_equals_1>=1))&&((FOS_equals_1>=1)&&(RSK_equals_0>=1))))),TRUE) * ((ERK_equals_0>=1)&&(FOS_equals_1>=1)))] != FALSE
(forward)formula 7,0,303.011,2666768,1,0,322,1.14124e+07,333,158,3891,2.06914e+07,387
FORMULA MAPKbis-PT-5310-CTLFireability-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: !((EF((((AP1_equals_1>=1)&&(MEK1_2_equals_1>=1))&&((PTEN_equals_1>=1)&&(p53_equals_0>=1)))) * !(FALSE)))
=> equivalent forward existential formula: ([(Init * !(E(TRUE U (((AP1_equals_1>=1)&&(MEK1_2_equals_1>=1))&&((PTEN_equals_1>=1)&&(p53_equals_0>=1))))))] != FALSE + [(Init * FALSE)] != FALSE)
(forward)formula 8,0,306.56,2729336,1,0,342,1.17633e+07,334,171,3893,2.10792e+07,423
FORMULA MAPKbis-PT-5310-CTLFireability-08 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EX(AG(EF(((FGFR3_equals_1>=1)&&(GRB2_equals_1>=1)))))
=> equivalent forward existential formula: [(EY(Init) * !(E(TRUE U !(E(TRUE U ((FGFR3_equals_1>=1)&&(GRB2_equals_1>=1)))))))] != FALSE
(forward)formula 9,0,306.562,2729864,1,0,342,1.17633e+07,335,171,3893,2.10792e+07,425
FORMULA MAPKbis-PT-5310-CTLFireability-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AG(EF((((((AKT_0>=1)&&(PDK1_equals_1>=1))&&(PTEN_equals_0>=1))&&(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_1>=1))&&(p38_equals_0>=1)))||(((EGFR_equals_1>=1)&&(PKC_equals_1>=1))&&((ERK_equals_1>=1)&&(RAF_equals_1>=1))))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U (((((AKT_0>=1)&&(PDK1_equals_1>=1))&&(PTEN_equals_0>=1))&&(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_1>=1))&&(p38_equals_0>=1)))||(((EGFR_equals_1>=1)&&(PKC_equals_1>=1))&&((ERK_equals_1>=1)&&(RAF_equals_1>=1)))))))] = FALSE
(forward)formula 10,1,357.123,2803256,1,0,358,1.21243e+07,14,179,1698,2.14646e+07,25
FORMULA MAPKbis-PT-5310-CTLFireability-10 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: EF(EG(((CREB_equals_0>=1)&&(DUSP1_equals_1>=1))))
=> equivalent forward existential formula: [FwdG(FwdU(Init,TRUE),((CREB_equals_0>=1)&&(DUSP1_equals_1>=1)))] != FALSE
Hit Full ! (commute/partial/dont) 141/26/27
(forward)formula 11,1,357.158,2803256,1,0,358,1.21243e+07,23,179,2183,2.14646e+07,29
FORMULA MAPKbis-PT-5310-CTLFireability-11 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: AX((FALSE * (EF(((MAP3K1_3_equals_0>=1)&&(RAS_equals_1>=1))) + AG(((BCL2_equals_1>=1)&&(CREB_equals_0>=1))))))
=> equivalent forward existential formula: ([(EY(Init) * !(FALSE))] = FALSE * [(FwdU((EY(Init) * !(E(TRUE U ((MAP3K1_3_equals_0>=1)&&(RAS_equals_1>=1))))),TRUE) * !(((BCL2_equals_1>=1)&&(CREB_equals_0>=1))))] = FALSE)
(forward)formula 12,0,357.276,2803256,1,0,358,1.21243e+07,29,179,2189,2.14646e+07,57
FORMULA MAPKbis-PT-5310-CTLFireability-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EF((((Apoptosis_equals_1>=1)&&(BCL2_equals_1>=1))&&(((PDK1_equals_0>=1)&&(p70_equals_1>=1))&&(((DUSP1_equals_0>=1)&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * (((Apoptosis_equals_1>=1)&&(BCL2_equals_1>=1))&&(((PDK1_equals_0>=1)&&(p70_equals_1>=1))&&(((DUSP1_equals_0>=1)&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))))] != FALSE
(forward)formula 13,0,357.277,2803256,1,0,358,1.21243e+07,30,179,2190,2.14646e+07,57
FORMULA MAPKbis-PT-5310-CTLFireability-13 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: ((((ELK1_equals_0>=1)&&(p38_equals_1>=1)) + !(EF((((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_1>=1))&&(MTK1_equals_1>=1))&&((CREB_equals_1>=1)&&(DUSP1_equals_0>=1)))))) + (((Apoptosis_equals_1>=1)&&(BCL2_equals_1>=1)) + AX((((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAOK_equals_1>=1)))))
=> equivalent forward existential formula: [(EY(((Init * !((((ELK1_equals_0>=1)&&(p38_equals_1>=1)) + !(E(TRUE U (((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_1>=1))&&(MTK1_equals_1>=1))&&((CREB_equals_1>=1)&&(DUSP1_equals_0>=1)))))))) * !(((Apoptosis_equals_1>=1)&&(BCL2_equals_1>=1))))) * !((((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAOK_equals_1>=1))))] = FALSE
(forward)formula 14,1,357.284,2803256,1,0,358,1.21243e+07,36,179,2211,2.14646e+07,61
FORMULA MAPKbis-PT-5310-CTLFireability-14 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: ((!(AX(((RAS_equals_0>=1)&&(SOS_equals_1>=1)))) + ((((AP1_equals_0>=1)&&(ATF2_equals_0>=1))&&(FOS_equals_1>=1))&&(JUN_equals_1>=1))) * EF(((((FOXO3_equals_1>=1)&&(JNK_equals_0>=1))&&((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_1>=1))&&(TAK1_equals_1>=1)))&&(!(((DUSP1_equals_0>=1)&&(TAOK_equals_1>=1))&&(p38_equals_0>=1))))))
=> equivalent forward existential formula: [(FwdU((Init * (!(!(EX(!(((RAS_equals_0>=1)&&(SOS_equals_1>=1)))))) + ((((AP1_equals_0>=1)&&(ATF2_equals_0>=1))&&(FOS_equals_1>=1))&&(JUN_equals_1>=1)))),TRUE) * ((((FOXO3_equals_1>=1)&&(JNK_equals_0>=1))&&((((DUSP1_equals_1>=1)&&(JNK_equals_0>=1))&&(MAP3K1_3_equals_1>=1))&&(TAK1_equals_1>=1)))&&(!(((DUSP1_equals_0>=1)&&(TAOK_equals_1>=1))&&(p38_equals_0>=1)))))] != FALSE
(forward)formula 15,0,357.285,2803256,1,0,358,1.21243e+07,37,179,2216,2.14646e+07,61
FORMULA MAPKbis-PT-5310-CTLFireability-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************


BK_STOP 1552886266734

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -smt]
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 91 ms
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 106 places.
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 173 transitions.
Mar 18, 2019 5:11:47 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 25 ms
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.instantiate.DomainAnalyzer computeVariableDomains
INFO: Found a total of 8 fixed domain variables (out of 106 variables) in GAL type MAPKbis_PT_5310
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: Found a total of 8 constant array cells/variables (out of 106 variables) in type MAPKbis_PT_5310
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: FGFR3_stimulus_equals_1,TGFBR_stimulus_equals_0,EGFR_stimulus_equals_1,DNA_damage_equals_1,TGFBR_stimulus_equals_1,DNA_damage_equals_0,EGFR_stimulus_equals_0,FGFR3_stimulus_equals_0,
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Removed 8 constant variables :FGFR3_stimulus_equals_1=0, TGFBR_stimulus_equals_0=1, EGFR_stimulus_equals_1=1, DNA_damage_equals_1=0, TGFBR_stimulus_equals_1=0, DNA_damage_equals_0=1, EGFR_stimulus_equals_0=0, FGFR3_stimulus_equals_0=1
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Simplified 16 expressions due to constant valuations.
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.instantiate.Simplifier simplifyFalseTransitions
INFO: Removed 5 false transitions.
Mar 18, 2019 5:11:47 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 106 ms
Mar 18, 2019 5:11:47 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 5 ms
Mar 18, 2019 5:11:47 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 2 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5310"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3957"
echo " Executing tool itstools"
echo " Input is MAPKbis-PT-5310, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r096-smll-155246587500347"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5310.tgz
mv MAPKbis-PT-5310 execution
cd execution
if [ "CTLFireability" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "CTLFireability" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;