Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2019-input.r093-smll-155246584400360.qcow2', fmt=qcow2 size=4294967296 backing_file='/data/fkordon/mcc2019-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
....................
=====================================================================
Generated by BenchKit 2-3957
Executing tool lola
Input is MAPKbis-PT-5320, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r093-smll-155246584400360
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 364K
-rw-r--r-- 1 mcc users 4.5K Feb 11 22:58 CTLCardinality.txt
-rw-r--r-- 1 mcc users 22K Feb 11 22:58 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.1K Feb 7 23:51 CTLFireability.txt
-rw-r--r-- 1 mcc users 20K Feb 7 23:51 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 102 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 340 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.6K Feb 5 00:14 LTLCardinality.txt
-rw-r--r-- 1 mcc users 10K Feb 5 00:14 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.6K Feb 4 22:36 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K Feb 4 22:36 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.4K Feb 4 06:30 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K Feb 4 06:30 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.1K Feb 1 00:04 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 24K Feb 1 00:04 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 4 22:21 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 4 22:21 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 5 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 0 Jan 29 09:34 model-fix.log
-rw-r--r-- 1 mcc users 166K Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-00
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-01
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-02
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-03
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-04
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-05
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-06
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-07
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-08
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-09
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-10
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-11
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-12
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-13
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-14
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1552910825573

info: Time: 3600 - MCC
vrfy: Checking ReachabilityFireability @ MAPKbis-PT-5320 @ 3570 seconds

FORMULA MAPKbis-PT-5320-ReachabilityFireability-06 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-14 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-10 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-01 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-09 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-07 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-00 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-03 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-05 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-02 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-08 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-15 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-13 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-04 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-11 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT

FORMULA MAPKbis-PT-5320-ReachabilityFireability-12 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
vrfy: finished
info: timeLeft: 3560
rslt: Output for ReachabilityFireability @ MAPKbis-PT-5320

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lola: LoLA will run for 3570 seconds at most (--timelimit)
lola: NET
lola: input: PNML file (--pnml)
lola: reading net from model.pnml
lola: reading pnml
lola: PNML file contains place/transition net
lola: finished parsing
lola: closed net file model.pnml
lola: 279/268435456 symbol table entries, 0 collisions
lola: preprocessing...
lola: Size of bit vector: 3392
lola: finding significant places
lola: 106 places, 173 transitions, 49 significant places
lola: compute conflict clusters
lola: computed conflict clusters
lola: Computing conflicting sets
lola: Computing back conflicting sets
lola: TASK
lola: Reading formula in XML format (--xmlformula)
lola: reading pnml
lola: reading formula from ReachabilityFireability.xml
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FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1) AND (FIREABLE(MEK1_2_equals_1_to_MEK1_2_equals_0_when_MAP3K1_3_equals_0_and_RAF_equals_0) OR FIREABLE(MEK1_2_equals_1_to_MEK1_2_equals_0_when_AP1_equals_1) OR NOT FIREABLE(MDM2_equals_0_to_MDM2_equals_1_when_AKT_equals_0_and_p14_equals_0_and_p53_equals_1) OR NOT FIREABLE(DUSP1_equals_1_to_DUSP1_equals_0_when_CREB_equals_0))))) : A (G ((NOT FIREABLE(RAF_equals_1_to_RAF_equals_0_when_PKC_equals_0_and_RAS_equals_0) OR NOT FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) OR FIREABLE(RAF_equals_0_to_RAF_equals_1_when_AKT_equals_0_and_ERK_equals_0_and_PKC_equals_1) OR FIREABLE(GRB2_equals_1_to_GRB2_equals_0_when_EGFR_equals_0_and_FRS2_equals_0_and_TGFBR_equals_0) OR (NOT FIREABLE(p14_equals_1_to_p14_equals_0_when_MYC_equals_0) AND NOT FIREABLE(MSK_equals_1_to_MSK_equals_0_when_ERK_equals_0_and_p38_equals_0))))) : E (F (FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_1))) : A (G (((NOT FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) AND FIREABLE(GADD45_equals_0_to_GADD45_equals_1_when_p53_equals_1)) OR (NOT FIREABLE(EGFR_equals_1_to_EGFR_equals_0_when_EGFR_stimulus_equals_0_and_SPRY_equals_0) AND NOT FIREABLE(SOS_equals_0_to_SOS_equals_1_when_GRB2_equals_1_and_RSK_equals_0))))) : E (F ((FIREABLE(RSK_equals_1_to_RSK_equals_0_when_ERK_equals_0) OR FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_TAK1_equals_1) OR (FIREABLE(ATM_equals_0_to_ATM_equals_1_when_DNA_damage_equals_1) AND FIREABLE(MAX_equals_0_to_MAX_equals_1_when_p38_equals_1) AND (FIREABLE(MYC_equals_1_to_MYC_equals_0_when_AKT_equals_0_and_MAX_equals_0) OR FIREABLE(EGFR_equals_1_to_EGFR_equals_0_when_GRB2_equals_1)) AND FIREABLE(Growth_Arrest_equals_0_to_Growth_Arrest_equals_1_when_p21_equals_1))))) : E (F ((FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1) AND FIREABLE(ELK1_equals_0_to_ELK1_equals_1_when_p38_equals_1) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAK1_equals_1)))) : A (G ((NOT FIREABLE(FRS2_equals_0_to_FRS2_equals_1_when_FGFR3_equals_1_and_GRB2_equals_0_and_SPRY_equals_0) OR NOT FIREABLE(GRB2_equals_1_to_GRB2_equals_0_when_EGFR_equals_0_and_FRS2_equals_0_and_TGFBR_equals_0)))) : A (G (((NOT FIREABLE(FOS_equals_1_to_FOS_equals_0_when_CREB_equals_0_and_ELK1_equals_0) AND NOT FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_EGFR_equals_1)) OR NOT FIREABLE(FGFR3_equals_0_to_FGFR3_equals_1_when_FGFR3_stimulus_equals_1_and_GRB2_equals_0_and_PKC_equals_0) OR (FIREABLE(GRB2_equals_0_to_GRB2_equals_1_when_FRS2_equals_1) AND ((FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_MAP3K1_3_equals_1) AND FIREABLE(BCL2_equals_0_to_BCL2_equals_1_when_AKT_equals_1_and_CREB_equals_1)) OR (FIREABLE(MDM2_equals_1_to_MDM2_equals_0_when_p14_equals_1) AND FIREABLE(RAF_equals_1_to_RAF_equals_0_when_AKT_equals_1))))))) : E (F (((FIREABLE(p21_equals_1_to_p21_equals_0_when_AKT_equals_1) AND FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1) AND FIREABLE(ERK_equals_0_to_ERK_equals_1_when_MEK1_2_equals_1) AND FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_0_and_TAOK_equals_0)) OR (FIREABLE(GADD45_equals_0_to_GADD45_equals_1_when_SMAD_equals_1) AND FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1) AND FIREABLE(GADD45_equals_0_to_GADD45_equals_1_when_p53_equals_1) AND (FIREABLE(PKC_equals_1_to_PKC_equals_0_when_PLCG_equals_0) OR FIREABLE(FRS2_equals_0_to_FRS2_equals_1_when_FGFR3_equals_1_and_GRB2_equals_0_and_SPRY_equals_0) OR NOT FIREABLE(FOXO3_equals_0_to_FOXO3_equals_1_when_AKT_equals_0_and_JNK_equals_1)))))) : E (F ((NOT FIREABLE(AP1_equals_0_to_AP1_equals_1_when_ATF2_equals_0_and_FOS_equals_1_and_JUN_equals_1) AND FIREABLE(DUSP1_equals_1_to_DUSP1_equals_0_when_CREB_equals_0) AND FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1) AND FIREABLE(FRS2_equals_1_to_FRS2_equals_0_when_FGFR3_equals_0) AND FIREABLE(TAK1_equals_1_to_TAK1_equals_0_when_TGFBR_equals_0) AND FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) AND FIREABLE(GAB1_equals_0_to_GAB1_equals_1_when_PI3K_equals_1) AND FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0)))) : E (F (FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0))) : E (F ((FIREABLE(FRS2_equals_1_to_FRS2_equals_0_when_GRB2_equals_1) AND (FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_FGFR3_equals_1) OR FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1)) AND (NOT FIREABLE(TAK1_equals_0_to_TAK1_equals_1_when_TGFBR_equals_1) OR (FIREABLE(FOXO3_equals_1_to_FOXO3_equals_0_when_JNK_equals_0) AND FIREABLE(p38_equals_1_to_p38_equals_0_when_DUSP1_equals_0_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0))) AND FIREABLE(AKT_equals_0_to_AKT_equals_1_when_PDK1_equals_1_and_PTEN_equals_0))))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 222 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_1)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F (FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_1)))
lola: processed formula length: 124
lola: 1 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_1)
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 5 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: 1 markings, 0 edges
lola: ========================================
lola: subprocess 1 will run for 237 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F (FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0)))
lola: processed formula length: 67
lola: 1 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0)
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: The predicate is unreachable.
lola: 1 markings, 0 edges
lola: ========================================
lola: subprocess 2 will run for 254 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(FRS2_equals_0_to_FRS2_equals_1_when_FGFR3_equals_1_and_GRB2_equals_0_and_SPRY_equals_0) OR NOT FIREABLE(GRB2_equals_1_to_GRB2_equals_0_when_EGFR_equals_0_and_FRS2_equals_0_and_TGFBR_equals_0))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: processed formula: A (G ((NOT FIREABLE(FRS2_equals_0_to_FRS2_equals_1_when_FGFR3_equals_1_and_GRB2_equals_0_and_SPRY_equals_0) OR NOT FIREABLE(GRB2_equals_1_to_GRB2_equals_0_when_EGFR_equals_0_and_FRS2_equals_0_and_TGFBR_equals_0))))
lola: processed formula length: 215
lola: 2 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: (FIREABLE(FRS2_equals_0_to_FRS2_equals_1_when_FGFR3_equals_1_and_GRB2_equals_0_and_SPRY_equals_0) AND FIREABLE(GRB2_equals_1_to_GRB2_equals_0_when_EGFR_equals_0_and_FRS2_equals_0_and_TGFBR_equals_0))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 8 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to ReachabilityFireability-2-0.sara
lola: state equation: calling and running sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: 1 markings, 0 edges
lola: ========================================
lola: subprocess 3 will run for 274 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(TAK1_equals_1_to_TAK1_equals_0_when_TGFBR_equals_0) AND NOT FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_FGFR3_equals_1))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: processed formula: A (G ((NOT FIREABLE(TAK1_equals_1_to_TAK1_equals_0_when_TGFBR_equals_0) AND NOT FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_FGFR3_equals_1))))
lola: processed formula length: 143
lola: 2 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: (FIREABLE(TAK1_equals_1_to_TAK1_equals_0_when_TGFBR_equals_0) OR FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_FGFR3_equals_1))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 4 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: 1 markings, 0 edges
lola: ========================================
lola: subprocess 4 will run for 297 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1) AND FIREABLE(ELK1_equals_0_to_ELK1_equals_1_when_p38_equals_1) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAK1_equals_1))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F ((FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1) AND FIREABLE(ELK1_equals_0_to_ELK1_equals_1_when_p38_equals_1) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAK1_equals_1))))
lola: processed formula length: 274
lola: 1 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: (FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1) AND FIREABLE(ELK1_equals_0_to_ELK1_equals_1_when_p38_equals_1) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAK1_equals_1))
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: 1 markings, 0 edges
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 10 literals and 1 conjunctive subformulas
lola: ========================================
lola: subprocess 5 will run for 324 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G (((NOT FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) AND FIREABLE(GADD45_equals_0_to_GADD45_equals_1_when_p53_equals_1)) OR (NOT FIREABLE(EGFR_equals_1_to_EGFR_equals_0_when_EGFR_stimulus_equals_0_and_SPRY_equals_0) AND NOT FIREABLE(SOS_equals_0_to_SOS_equals_1_when_GRB2_equals_1_and_RSK_equals_0)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: processed formula: A (G (((NOT FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) AND FIREABLE(GADD45_equals_0_to_GADD45_equals_1_when_p53_equals_1)) OR (NOT FIREABLE(EGFR_equals_1_to_EGFR_equals_0_when_EGFR_stimulus_equals_0_and_SPRY_equals_0) AND NOT FIREABLE(SOS_equals_0_to_SOS_equals_1_when_GRB2_equals_1_and_RSK_equals_0)))))
lola: processed formula length: 337
lola: 2 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: 1 markings, 0 edges
lola: formula 0: ((FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) OR NOT FIREABLE(GADD45_equals_0_to_GADD45_equals_1_when_p53_equals_1)) AND (FIREABLE(EGFR_equals_1_to_EGFR_equals_0_when_EGFR_stimulus_equals_0_and_SPRY_equals_0) OR FIREABLE(SOS_equals_0_to_SOS_equals_1_when_GRB2_equals_1_and_RSK_equals_0)))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 28 literals and 6 conjunctive subformulas
lola: ========================================
lola: subprocess 6 will run for 356 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(RAF_equals_1_to_RAF_equals_0_when_AKT_equals_1) OR NOT FIREABLE(FGFR3_equals_1_to_FGFR3_equals_0_when_GRB2_equals_1) OR FIREABLE(Proliferation_equals_1_to_Proliferation_equals_0_when_p70_equals_0) OR NOT FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: processed formula: A (G ((NOT FIREABLE(RAF_equals_1_to_RAF_equals_0_when_AKT_equals_1) OR NOT FIREABLE(FGFR3_equals_1_to_FGFR3_equals_0_when_GRB2_equals_1) OR FIREABLE(Proliferation_equals_1_to_Proliferation_equals_0_when_p70_equals_0) OR NOT FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0))))
lola: processed formula length: 289
lola: 2 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: state equation task get result rewrite finished id 0
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: 1 markings, 0 edges
lola: state equation task get result unparse finished++ id 0
lola: formula 0: (FIREABLE(RAF_equals_1_to_RAF_equals_0_when_AKT_equals_1) AND FIREABLE(FGFR3_equals_1_to_FGFR3_equals_0_when_GRB2_equals_1) AND NOT FIREABLE(Proliferation_equals_1_to_Proliferation_equals_0_when_p70_equals_0) AND FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 14 literals and 2 conjunctive subformulas
lola: ========================================
lola: subprocess 7 will run for 396 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(p38_equals_1_to_p38_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0) OR NOT FIREABLE(ELK1_equals_0_to_ELK1_equals_1_when_p38_equals_1) OR (NOT FIREABLE(PPP2CA_equals_1_to_PPP2CA_equals_0_when_p38_equals_0) AND NOT FIREABLE(p14_equals_0_to_p14_equals_1_when_MYC_equals_1)) OR NOT FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_a... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: processed formula: A (G ((NOT FIREABLE(p38_equals_1_to_p38_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0) OR NOT FIREABLE(ELK1_equals_0_to_ELK1_equals_1_when_p38_equals_1) OR (NOT FIREABLE(PPP2CA_equals_1_to_PPP2CA_equals_0_when_p38_equals_0) AND NOT FIREABLE(p14_equals_0_to_p14_equals_1_when_MYC_equals_1)) OR NOT FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_a... (shortened)
lola: processed formula length: 460
lola: 2 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: (FIREABLE(p38_equals_1_to_p38_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0) AND FIREABLE(ELK1_equals_0_to_ELK1_equals_1_when_p38_equals_1) AND (FIREABLE(PPP2CA_equals_1_to_PPP2CA_equals_0_when_p38_equals_0) OR FIREABLE(p14_equals_0_to_p14_equals_1_when_MYC_equals_1)) AND FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 28 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to ReachabilityFireability-7-0.sara
lola: state equation: calling and running sara
sara: try reading problem file ReachabilityFireability-7-0.sara.
sara: place or transition ordering is non-deterministic

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================
lola: subprocess 8 will run for 445 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(RAF_equals_1_to_RAF_equals_0_when_PKC_equals_0_and_RAS_equals_0) OR NOT FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) OR FIREABLE(RAF_equals_0_to_RAF_equals_1_when_AKT_equals_0_and_ERK_equals_0_and_PKC_equals_1) OR FIREABLE(GRB2_equals_1_to_GRB2_equals_0_when_EGFR_equals_0_and_FRS2_equals_0_and_TGFBR_equals_0) OR (NOT FIREABLE(p14_equals_1_to_p1... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: processed formula: A (G ((NOT FIREABLE(RAF_equals_1_to_RAF_equals_0_when_PKC_equals_0_and_RAS_equals_0) OR NOT FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) OR FIREABLE(RAF_equals_0_to_RAF_equals_1_when_AKT_equals_0_and_ERK_equals_0_and_PKC_equals_1) OR FIREABLE(GRB2_equals_1_to_GRB2_equals_0_when_EGFR_equals_0_and_FRS2_equals_0_and_TGFBR_equals_0) OR (NOT FIREABLE(p14_equals_1_to_p1... (shortened)
lola: processed formula length: 515
lola: 2 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: (FIREABLE(RAF_equals_1_to_RAF_equals_0_when_PKC_equals_0_and_RAS_equals_0) AND FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) AND NOT FIREABLE(RAF_equals_0_to_RAF_equals_1_when_AKT_equals_0_and_ERK_equals_0_and_PKC_equals_1) AND NOT FIREABLE(GRB2_equals_1_to_GRB2_equals_0_when_EGFR_equals_0_and_FRS2_equals_0_and_TGFBR_equals_0) AND (FIREABLE(p14_equals_1_to_p14_equals_0_when_MYC_equals_0) OR FIREABLE(MSK_equals_1_to_MSK_equals_0_when_ERK_equals_0_and_p38_equals_0)))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 292 literals and 28 conjunctive subformulas
lola: state equation: write sara problem file to ReachabilityFireability-8-0.sara
lola: state equation: calling and running sara
sara: try reading problem file ReachabilityFireability-8-0.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 882627 markings, 3212265 edges, 176525 markings/sec, 0 secs
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: 908440 markings, 3425080 edges
lola: ========================================
lola: subprocess 9 will run for 508 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (((FIREABLE(PI3K_equals_1_to_PI3K_equals_0_when_GAB1_equals_0_and_SOS_equals_0) AND (FIREABLE(TAK1_equals_0_to_TAK1_equals_1_when_TGFBR_equals_1) OR FIREABLE(MYC_equals_0_to_MYC_equals_1_when_AKT_equals_0_and_MAX_equals_1_and_MSK_equals_1) OR (FIREABLE(EGFR_equals_1_to_EGFR_equals_0_when_PKC_equals_1) AND FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MT... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F (((FIREABLE(PI3K_equals_1_to_PI3K_equals_0_when_GAB1_equals_0_and_SOS_equals_0) AND (FIREABLE(TAK1_equals_0_to_TAK1_equals_1_when_TGFBR_equals_1) OR FIREABLE(MYC_equals_0_to_MYC_equals_1_when_AKT_equals_0_and_MAX_equals_1_and_MSK_equals_1) OR (FIREABLE(EGFR_equals_1_to_EGFR_equals_0_when_PKC_equals_1) AND FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MT... (shortened)
lola: processed formula length: 575
lola: 1 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: ((FIREABLE(PI3K_equals_1_to_PI3K_equals_0_when_GAB1_equals_0_and_SOS_equals_0) AND (FIREABLE(TAK1_equals_0_to_TAK1_equals_1_when_TGFBR_equals_1) OR FIREABLE(MYC_equals_0_to_MYC_equals_1_when_AKT_equals_0_and_MAX_equals_1_and_MSK_equals_1) OR (FIREABLE(EGFR_equals_1_to_EGFR_equals_0_when_PKC_equals_1) AND FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0)))) OR FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_0_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 28 literals and 4 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 15 markings, 15 edges
lola: ========================================
lola: subprocess 10 will run for 593 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(RSK_equals_1_to_RSK_equals_0_when_ERK_equals_0) OR FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_TAK1_equals_1) OR (FIREABLE(ATM_equals_0_to_ATM_equals_1_when_DNA_damage_equals_1) AND FIREABLE(MAX_equals_0_to_MAX_equals_1_when_p38_equals_1) AND (FIREABLE(MYC_equals_1_to_MYC_equals_0_when_AKT_equals_0_and_MAX_equals_0) OR FIREABLE(EGFR_equals_1_to_EGFR_equals_0_wh... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F ((FIREABLE(RSK_equals_1_to_RSK_equals_0_when_ERK_equals_0) OR FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_TAK1_equals_1) OR (FIREABLE(ATM_equals_0_to_ATM_equals_1_when_DNA_damage_equals_1) AND FIREABLE(MAX_equals_0_to_MAX_equals_1_when_p38_equals_1) AND (FIREABLE(MYC_equals_1_to_MYC_equals_0_when_AKT_equals_0_and_MAX_equals_0) OR FIREABLE(EGFR_equals_1_to_EGFR_equals_0_wh... (shortened)
lola: processed formula length: 503
lola: 1 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: 2 markings, 1 edges
lola: formula 0: (FIREABLE(RSK_equals_1_to_RSK_equals_0_when_ERK_equals_0) OR FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_TAK1_equals_1) OR (FIREABLE(ATM_equals_0_to_ATM_equals_1_when_DNA_damage_equals_1) AND FIREABLE(MAX_equals_0_to_MAX_equals_1_when_p38_equals_1) AND (FIREABLE(MYC_equals_1_to_MYC_equals_0_when_AKT_equals_0_and_MAX_equals_0) OR FIREABLE(EGFR_equals_1_to_EGFR_equals_0_when_GRB2_equals_1)) AND FIREABLE(Growth_Arrest_equals_0_to_Growth_Arrest_equals_1_when_p21_equals_1)))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 22 literals and 4 conjunctive subformulas
lola: ========================================
lola: subprocess 11 will run for 712 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(FRS2_equals_1_to_FRS2_equals_0_when_GRB2_equals_1) AND (FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_FGFR3_equals_1) OR FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1)) AND (NOT FIREABLE(TAK1_equals_0_to_TAK1_equals_1_when_TGFBR_equals_1) OR (FIREABLE(FOXO3_equals_1_to_FOXO3_equals_0_when_JNK_e... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F ((FIREABLE(FRS2_equals_1_to_FRS2_equals_0_when_GRB2_equals_1) AND (FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_FGFR3_equals_1) OR FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1)) AND (NOT FIREABLE(TAK1_equals_0_to_TAK1_equals_1_when_TGFBR_equals_1) OR (FIREABLE(FOXO3_equals_1_to_FOXO3_equals_0_when_JNK_e... (shortened)
lola: processed formula length: 632
lola: 1 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: 1 markings, 0 edges
lola: formula 0: (FIREABLE(FRS2_equals_1_to_FRS2_equals_0_when_GRB2_equals_1) AND (FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_FGFR3_equals_1) OR FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1)) AND (NOT FIREABLE(TAK1_equals_0_to_TAK1_equals_1_when_TGFBR_equals_1) OR (FIREABLE(FOXO3_equals_1_to_FOXO3_equals_0_when_JNK_equals_0) AND FIREABLE(p38_equals_1_to_p38_equals_0_when_DUSP1_equals_0_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0))) AND FIREABLE(AKT_equals_0_to_AKT_equals_1_when_PDK1_equals_1_and_PTEN_equals_0))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 74 literals and 6 conjunctive subformulas
lola: ========================================
lola: subprocess 12 will run for 890 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((NOT FIREABLE(AP1_equals_0_to_AP1_equals_1_when_ATF2_equals_0_and_FOS_equals_1_and_JUN_equals_1) AND FIREABLE(DUSP1_equals_1_to_DUSP1_equals_0_when_CREB_equals_0) AND FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1) AND FIREABLE(FRS2_equals_1_to_FRS2_equals_0_when_FGFR3_equals_0) AND FIREABLE(TAK1_equals_1_to_TAK1_equals_0_w... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F ((NOT FIREABLE(AP1_equals_0_to_AP1_equals_1_when_ATF2_equals_0_and_FOS_equals_1_and_JUN_equals_1) AND FIREABLE(DUSP1_equals_1_to_DUSP1_equals_0_when_CREB_equals_0) AND FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1) AND FIREABLE(FRS2_equals_1_to_FRS2_equals_0_when_FGFR3_equals_0) AND FIREABLE(TAK1_equals_1_to_TAK1_equals_0_w... (shortened)
lola: processed formula length: 686
lola: 1 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: (NOT FIREABLE(AP1_equals_0_to_AP1_equals_1_when_ATF2_equals_0_and_FOS_equals_1_and_JUN_equals_1) AND FIREABLE(DUSP1_equals_1_to_DUSP1_equals_0_when_CREB_equals_0) AND FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1) AND FIREABLE(FRS2_equals_1_to_FRS2_equals_0_when_FGFR3_equals_0) AND FIREABLE(TAK1_equals_1_to_TAK1_equals_0_when_TGFBR_equals_0) AND FIREABLE(AP1_equals_1_to_AP1_equals_0_when_ATF2_equals_0_and_FOS_equals_0) AND FIREABLE(GAB1_equals_0_to_GAB1_equals_1_when_PI3K_equals_1) AND FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_0))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 66 literals and 3 conjunctive subformulas
lola: state equation: write sara problem file to ReachabilityFireability-12-0.sara
lola: state equation: calling and running sara
sara: try reading problem file ReachabilityFireability-12-0.sara.
sara: place or transition ordering is non-deterministic

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: no
lola: produced by: state equation
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 13 will run for 1186 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((NOT FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0) AND (FIREABLE(Apoptosis_equals_0_to_Apoptosis_equals_1_when_BCL2_equals_0_and_ERK_equals_0_and_FOXO3_equals_1_and_p53_equals_1) OR FIREABLE(CREB_equals_1_to_CREB_equals_0_when_MSK_equals_0)) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F ((NOT FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0) AND (FIREABLE(Apoptosis_equals_0_to_Apoptosis_equals_1_when_BCL2_equals_0_and_ERK_equals_0_and_FOXO3_equals_1_and_p53_equals_1) OR FIREABLE(CREB_equals_1_to_CREB_equals_0_when_MSK_equals_0)) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_... (shortened)
lola: processed formula length: 772
lola: 1 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: state equation task get result rewrite finished id 0
lola: SUBRESULT
lola: result: no
lola: state equation task get result unparse finished++ id 0
lola: formula 0: (NOT FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0) AND (FIREABLE(Apoptosis_equals_0_to_Apoptosis_equals_1_when_BCL2_equals_0_and_ERK_equals_0_and_FOXO3_equals_1_and_p53_equals_1) OR FIREABLE(CREB_equals_1_to_CREB_equals_0_when_MSK_equals_0)) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1) AND (FIREABLE(MEK1_2_equals_1_to_MEK1_2_equals_0_when_MAP3K1_3_equals_0_and_RAF_equals_0) OR FIREABLE(MEK1_2_equals_1_to_MEK1_2_equals_0_when_AP1_equals_1) OR NOT FIREABLE(MDM2_equals_0_to_MDM2_equals_1_when_AKT_equals_0_and_p14_equals_0_and_p53_equals_1) OR NOT FIREABLE(DUSP1_equals_1_to_DUSP1_equals_0_when_CREB_equals_0)))
lola: produced by: state space
lola: The predicate is unreachable.
lola: 1 markings, 0 edges
lola: ========================================
lola: subprocess 14 will run for 1780 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G (((NOT FIREABLE(FOS_equals_1_to_FOS_equals_0_when_CREB_equals_0_and_ELK1_equals_0) AND NOT FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_EGFR_equals_1)) OR NOT FIREABLE(FGFR3_equals_0_to_FGFR3_equals_1_when_FGFR3_stimulus_equals_1_and_GRB2_equals_0_and_PKC_equals_0) OR (FIREABLE(GRB2_equals_0_to_GRB2_equals_1_when_FRS2_equals_1) AND ((FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: processed formula: A (G (((NOT FIREABLE(FOS_equals_1_to_FOS_equals_0_when_CREB_equals_0_and_ELK1_equals_0) AND NOT FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_EGFR_equals_1)) OR NOT FIREABLE(FGFR3_equals_0_to_FGFR3_equals_1_when_FGFR3_stimulus_equals_1_and_GRB2_equals_0_and_PKC_equals_0) OR (FIREABLE(GRB2_equals_0_to_GRB2_equals_1_when_FRS2_equals_1) AND ((FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0... (shortened)
lola: processed formula length: 636
lola: 2 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:787
lola: state equation task get result rewrite finished id 0
lola: state equation task get result unparse finished++ id 0
lola: formula 0: ((FIREABLE(FOS_equals_1_to_FOS_equals_0_when_CREB_equals_0_and_ELK1_equals_0) OR FIREABLE(PLCG_equals_0_to_PLCG_equals_1_when_EGFR_equals_1)) AND FIREABLE(FGFR3_equals_0_to_FGFR3_equals_1_when_FGFR3_stimulus_equals_1_and_GRB2_equals_0_and_PKC_equals_0) AND (NOT FIREABLE(GRB2_equals_0_to_GRB2_equals_1_when_FRS2_equals_1) OR ((NOT FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_MAP3K1_3_equals_1) OR NOT FIREABLE(BCL2_equals_0_to_BCL2_equals_1_when_AKT_equals_1_and_CREB_equals_1)) AND (NOT FIREABLE(MDM2_equals_1_to_MDM2_equals_0_when_p14_equals_1) OR NOT FIREABLE(RAF_equals_1_to_RAF_equals_0_when_AKT_equals_1)))))
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: 1 markings, 0 edges
lola: ========================================
lola: subprocess 15 will run for 3560 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (((FIREABLE(p21_equals_1_to_p21_equals_0_when_AKT_equals_1) AND FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1) AND FIREABLE(ERK_equals_0_to_ERK_equals_1_when_MEK1_2_equals_1) AND FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_an... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: processed formula: E (F (((FIREABLE(p21_equals_1_to_p21_equals_0_when_AKT_equals_1) AND FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1) AND FIREABLE(ERK_equals_0_to_ERK_equals_1_when_MEK1_2_equals_1) AND FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_an... (shortened)
lola: processed formula length: 983
lola: 1 rewrites
lola: closed formula file ReachabilityFireability.xml
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: built state equation task
lola: RUNNING
lola: state equation task get result started, id 0
lola: rewrite Frontend/Parser/formula_rewrite.k:711
lola: state equation task get result rewrite finished id 0
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: state equation task get result unparse finished++ id 0
lola: The predicate is unreachable.
lola: 1 markings, 0 edges
lola: formula 0: ((FIREABLE(p21_equals_1_to_p21_equals_0_when_AKT_equals_1) AND FIREABLE(ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0) AND FIREABLE(JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1) AND FIREABLE(ERK_equals_0_to_ERK_equals_1_when_MEK1_2_equals_1) AND FIREABLE(JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_0_and_TAOK_equals_0)) OR (FIREABLE(GADD45_equals_0_to_GADD45_equals_1_when_SMAD_equals_1) AND FIREABLE(p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1) AND FIREABLE(GADD45_equals_0_to_GADD45_equals_1_when_p53_equals_1) AND (FIREABLE(PKC_equals_1_to_PKC_equals_0_when_PLCG_equals_0) OR FIREABLE(FRS2_equals_0_to_FRS2_equals_1_when_FGFR3_equals_1_and_GRB2_equals_0_and_SPRY_equals_0) OR NOT FIREABLE(FOXO3_equals_0_to_FOXO3_equals_1_when_AKT_equals_0_and_JNK_equals_1))))
lola: state equation task get result unparse finished id 0
lola: state equation: Generated DNF with 76 literals and 6 conjunctive subformulas
lola: ========================================
lola: RESULT
lola:
SUMMARY: yes yes yes yes no yes no yes no no yes yes no no no no
lola:
preliminary result: yes yes yes yes no yes no yes no no yes yes no no no no
lola: memory consumption: 16112 KB
lola: time consumption: 10 seconds
lola: print data as JSON (--json)
lola: writing JSON to ReachabilityFireability.json
lola: closed JSON file ReachabilityFireability.json
rslt: finished

BK_STOP 1552910835694

--------------------
content from stderr:

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5320"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3957"
echo " Executing tool lola"
echo " Input is MAPKbis-PT-5320, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r093-smll-155246584400360"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5320.tgz
mv MAPKbis-PT-5320 execution
cd execution
if [ "ReachabilityFireability" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;